[INFO] fetching crate docking 0.1.0...
[INFO] testing docking-0.1.0 against 1.99.0-beta.8+cargoflags=--release for beta-release-1.100-2
[INFO] extracting crate docking 0.1.0 into /workspace/builds/worker-5-tc1/source
[INFO] started tweaking crates.io crate docking 0.1.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate docking 0.1.0
[INFO] tweaked toml for crates.io crate docking 0.1.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate docking 0.1.0 on toolchain 1.99.0-beta.8
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate docking 0.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.99.0-beta.8" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7
[INFO] running `Command { std: "docker" "start" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling docking v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 2.13s
[INFO] running `Command { std: "docker" "inspect" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen" "--no-run" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr]    Compiling docking v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 1m 49s
[INFO] running `Command { std: "docker" "inspect" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7" "/opt/rustwide/cargo-home/bin/cargo" "+1.99.0-beta.8" "test" "--frozen" "--release", kill_on_drop: false }`
[INFO] [stderr]     Finished `release` profile [optimized] target(s) in 0.03s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/release/deps/docking-cdabb39e83851d25)
[INFO] [stdout] 
[INFO] [stdout] running 51 tests
[INFO] [stdout] test atom::constants::tests::string_to_ad_type_lookups ... ok
[INFO] [stdout] test atom::constants::tests::ad_table_has_31_entries_indexed_correctly ... ok
[INFO] [stdout] test atom::constants::tests::predicates ... ok
[INFO] [stdout] test atom::tests::assign_el_from_ad ... ok
[INFO] [stdout] test atom::constants::tests::max_covalent_radius_is_calcium ... ok
[INFO] [stdout] test atom::constants::tests::xs_radii_table_size_matches ... ok
[INFO] [stdout] test atom::constants::tests::el_mapping ... ok
[INFO] [stdout] test atom::tests::covalent_bond_length ... ok
[INFO] [stdout] test math::mat3::tests::identity_times_vec ... ok
[INFO] [stdout] test math::quaternion::tests::normalize_approx_leaves_near_unit_untouched ... ok
[INFO] [stdout] test math::quaternion::tests::normalize_approx_rescales_when_far ... ok
[INFO] [stdout] test math::quaternion::tests::angle_axis_composition_adds_angles ... ok
[INFO] [stdout] test math::quaternion::tests::identity_multiplication ... ok
[INFO] [stdout] test math::quaternion::tests::identity_rotation_matrix ... ok
[INFO] [stdout] test math::quaternion::tests::rotation_about_z_90_degrees ... ok
[INFO] [stdout] test atom::tests::default_type_is_unassigned ... ok
[INFO] [stdout] test math::mat3::tests::column_major_layout ... ok
[INFO] [stdout] test math::mat3::tests::mul_vec_matches_formula ... ok
[INFO] [stdout] test math::quaternion::tests::rotation_matrix_is_orthonormal_and_preserves_length ... ok
[INFO] [stdout] test model::conf::tests::dof_count ... ok
[INFO] [stdout] test model::conf::tests::conf_new_sizes_torsions ... ok
[INFO] [stdout] test model::matrix::tests::strictly_triangular_mobility ... ok
[INFO] [stdout] test model::matrix::tests::triangular_indices_are_packed ... ok
[INFO] [stdout] test model::matrix::tests::triangular_matrix_roundtrips ... ok
[INFO] [stdout] test model::tests::coord_substitution_overwrites_only_coordinate_columns ... ok
[INFO] [stdout] test pdbqt::tests::blank_charge_field_defaults_to_zero ... ok
[INFO] [stdout] test pdbqt::tests::invalid_coordinate_reports_which_field ... ok
[INFO] [stdout] test pdbqt::tests::parses_a_wellformed_atom_line ... ok
[INFO] [stdout] test math::tests::normalize_angle_wraps_into_range ... ok
[INFO] [stdout] test math::tests::pi_is_the_ieee754_nearest_double_to_pi ... ok
[INFO] [stdout] test math::vec3::tests::cross_is_right_handed ... ok
[INFO] [stdout] test math::vec3::tests::dot_and_norm ... ok
[INFO] [stdout] test math::vec3::tests::ops_and_distance ... ok
[INFO] [stdout] test pdbqt::tests::too_short_line_errors_instead_of_truncating ... ok
[INFO] [stdout] test random::tests::deterministic_for_same_seed ... ok
[INFO] [stdout] test random::tests::mt19937_known_vector ... ok
[INFO] [stdout] test scoring::eval::tests::force_even_voxels_rounds_up_odd ... ok
[INFO] [stdout] test random::tests::orientation_is_unit ... ok
[INFO] [stdout] test scoring::terms::tests::h_bond_requires_donor_acceptor ... ok
[INFO] [stdout] test scoring::terms::tests::hydrophobic_requires_two_hydrophobic_atoms ... ok
[INFO] [stdout] test scoring::terms::tests::repulsion_only_when_closer_than_optimal ... ok
[INFO] [stdout] test scoring::terms::tests::optimal_distance_is_sum_of_radii ... ok
[INFO] [stdout] test scoring::eval::tests::box_quantizes_like_vina ... ok
[INFO] [stdout] test random::tests::random_fl_in_range_and_roughly_uniform ... ok
[INFO] [stdout] test random::tests::random_int_covers_endpoints ... ok
[INFO] [stdout] test scoring::terms::tests::gaussian_peaks_at_optimal ... ok
[INFO] [stdout] test scoring::terms::tests::slope_step_ramps ... ok
[INFO] [stdout] test scoring::tests::curl_leaves_attractive_unchanged_and_softens_repulsive ... ok
[INFO] [stdout] test scoring::tests::conf_independent_matches_known_1iep_relation ... ok
[INFO] [stdout] test scoring::tests::conf_independent_weight_is_1_923 ... ok
[INFO] [stderr]      Running tests/api.rs (/opt/rustwide/target/release/deps/api-01abb61ff4b1ef0b)
[INFO] [stdout] test random::tests::random_normal_stats ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 51 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test api_dock_returns_ranked_poses ... FAILED
[INFO] [stdout] test api_score_only_matches_golden ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- api_dock_returns_ranked_poses stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'api_dock_returns_ranked_poses' (600) panicked at tests/api.rs:10:52:
[INFO] [stdout] /opt/rustwide/workdir/tests/golden/1iep/receptor.pdbqt: No such file or directory (os error 2)
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x57e603bbb626 - <<std[70759c8f55707aa4]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[df12db4294e9bfd3]::fmt::Display>::fmt
[INFO] [stdout]    1:     0x57e603b4b3aa - core[df12db4294e9bfd3]::fmt::write
[INFO] [stdout]    2:     0x57e603bc0b5c - <alloc[2182bb758b4b3781]::vec::Vec<u8> as core[df12db4294e9bfd3]::io::write::Write>::write_fmt
[INFO] [stdout]    3:     0x57e603b98452 - std[70759c8f55707aa4]::panicking::default_hook::{closure#0}
[INFO] [stdout]    4:     0x57e603bb3ca1 - std[70759c8f55707aa4]::panicking::default_hook
[INFO] [stdout]    5:     0x57e603bb3e82 - std[70759c8f55707aa4]::panicking::panic_with_hook
[INFO] [stdout]    6:     0x57e603b98502 - std[70759c8f55707aa4]::panicking::panic_handler::{closure#0}
[INFO] [stdout]    7:     0x57e603b91279 - std[70759c8f55707aa4]::sys::backtrace::__rust_end_short_backtrace::<std[70759c8f55707aa4]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]    8:     0x57e603b991ad - __rustc[8fa7c3cbc660c2b3]::rust_begin_unwind
[INFO] [stdout]    9:     0x57e603b4ba9c - core[df12db4294e9bfd3]::panicking::panic_fmt
[INFO] [stdout]   10:     0x57e603b45799 - api[b8ae8f79a32a1f82]::read::{closure#0}
[INFO] [stdout]   11:     0x57e603b4644a - <api[b8ae8f79a32a1f82]::api_dock_returns_ranked_poses::{closure#0} as core[df12db4294e9bfd3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]   12:     0x57e603bc21cb - test[9d35eded1c95d3be]::__rust_begin_short_backtrace::<core[df12db4294e9bfd3]::result::Result<(), alloc[2182bb758b4b3781]::string::String>, fn() -> core[df12db4294e9bfd3]::result::Result<(), alloc[2182bb758b4b3781]::string::String>>
[INFO] [stdout]   13:     0x57e603bd0321 - test[9d35eded1c95d3be]::run_test::{closure#0}
[INFO] [stdout]   14:     0x57e603bc9a34 - std[70759c8f55707aa4]::sys::backtrace::__rust_begin_short_backtrace::<test[9d35eded1c95d3be]::run_test::{closure#1}, ()>
[INFO] [stdout]   15:     0x57e603bd4142 - <std[70759c8f55707aa4]::thread::lifecycle::spawn_unchecked<test[9d35eded1c95d3be]::run_test::{closure#1}, ()>::{closure#1} as core[df12db4294e9bfd3]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]   16:     0x57e603bba7fe - <std[70759c8f55707aa4]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]   17:     0x761b579b1dfa - <unknown>
[INFO] [stdout]   18:     0x761b57a453d4 - clone
[INFO] [stdout]   19:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] ---- api_score_only_matches_golden stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'api_score_only_matches_golden' (601) panicked at tests/api.rs:10:52:
[INFO] [stdout] /opt/rustwide/workdir/tests/golden/1iep/receptor.pdbqt: No such file or directory (os error 2)
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x57e603bbb626 - <<std[70759c8f55707aa4]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[df12db4294e9bfd3]::fmt::Display>::fmt
[INFO] [stdout]    1:     0x57e603b4b3aa - core[df12db4294e9bfd3]::fmt::write
[INFO] [stdout]    2:     0x57e603bc0b5c - <alloc[2182bb758b4b3781]::vec::Vec<u8> as core[df12db4294e9bfd3]::io::write::Write>::write_fmt
[INFO] [stdout]    3:     0x57e603b98452 - std[70759c8f55707aa4]::panicking::default_hook::{closure#0}
[INFO] [stdout]    4:     0x57e603bb3ca1 - std[70759c8f55707aa4]::panicking::default_hook
[INFO] [stdout]    5:     0x57e603bb3e82 - std[70759c8f55707aa4]::panicking::panic_with_hook
[INFO] [stdout]    6:     0x57e603b98502 - std[70759c8f55707aa4]::panicking::panic_handler::{closure#0}
[INFO] [stdout]    7:     0x57e603b91279 - std[70759c8f55707aa4]::sys::backtrace::__rust_end_short_backtrace::<std[70759c8f55707aa4]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]    8:     0x57e603b991ad - __rustc[8fa7c3cbc660c2b3]::rust_begin_unwind
[INFO] [stdout]    9:     0x57e603b4ba9c - core[df12db4294e9bfd3]::panicking::panic_fmt
[INFO] [stdout]   10:     0x57e603b45799 - api[b8ae8f79a32a1f82]::read::{closure#0}
[INFO] [stdout]   11:     0x57e603b46910 - <api[b8ae8f79a32a1f82]::api_score_only_matches_golden::{closure#0} as core[df12db4294e9bfd3]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]   12:     0x57e603bc21cb - test[9d35eded1c95d3be]::__rust_begin_short_backtrace::<core[df12db4294e9bfd3]::result::Result<(), alloc[2182bb758b4b3781]::string::String>, fn() -> core[df12db4294e9bfd3]::result::Result<(), alloc[2182bb758b4b3781]::string::String>>
[INFO] [stdout]   13:     0x57e603bd0321 - test[9d35eded1c95d3be]::run_test::{closure#0}
[INFO] [stdout]   14:     0x57e603bc9a34 - std[70759c8f55707aa4]::sys::backtrace::__rust_begin_short_backtrace::<test[9d35eded1c95d3be]::run_test::{closure#1}, ()>
[INFO] [stdout]   15:     0x57e603bd4142 - <std[70759c8f55707aa4]::thread::lifecycle::spawn_unchecked<test[9d35eded1c95d3be]::run_test::{closure#1}, ()>::{closure#1} as core[df12db4294e9bfd3]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]   16:     0x57e603bba7fe - <std[70759c8f55707aa4]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]   17:     0x761b579b1dfa - <unknown>
[INFO] [stdout]   18:     0x761b57a453d4 - clone
[INFO] [stdout]   19:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     api_dock_returns_ranked_poses
[INFO] [stdout]     api_score_only_matches_golden
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 0 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--test api`
[INFO] running `Command { std: "docker" "inspect" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7", kill_on_drop: false }`
[INFO] [stdout] b8a89299dfb2f813bf96291bd2a82fb5883f36b63a7643079ce82541960b01c7
