[INFO] cloning repository https://github.com/sawsimeon/qsar
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sawsimeon/qsar" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsawsimeon%2Fqsar", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsawsimeon%2Fqsar'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 9b563021b5b384a4b959dc8c54f120cb8d588c5a
[INFO] testing sawsimeon/qsar against 1.100.0-beta.1+cargoflags=--release for beta-release-1.100-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsawsimeon%2Fqsar" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/sawsimeon/qsar
[INFO] finished tweaking git repo https://github.com/sawsimeon/qsar
[INFO] tweaked toml for git repo https://github.com/sawsimeon/qsar written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/sawsimeon/qsar on toolchain 1.100.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/sawsimeon/qsar already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.100.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:24:12
[INFO] [stderr]    |
[INFO] [stderr] 24 | homepage = "https://github.com/sawsimeon/qsar"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 30 | repository = "https://github.com/sawsimeon/qsar"
[INFO] [stderr]    |              -----------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `qsar` (manifest) generated 1 warning
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:77db811e55d90add9212f6832c23229e3de5f1c1f9905e8cb07319ea15df73ac" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9
[INFO] running `Command { std: "docker" "start" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9" "/opt/rustwide/cargo-home/bin/cargo" "+1.100.0-beta.1" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }`
[INFO] [stderr] warning: `package.homepage` is redundant with `package.repository`
[INFO] [stderr]   --> Cargo.toml:24:12
[INFO] [stderr]    |
[INFO] [stderr] 24 | homepage = "https://github.com/sawsimeon/qsar"
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 30 | repository = "https://github.com/sawsimeon/qsar"
[INFO] [stderr]    |              -----------------------------------
[INFO] [stderr]    |
[INFO] [stderr]    = note: `cargo::redundant_homepage` is set to `warn` by default
[INFO] [stderr] help: consider removing `package.homepage`
[INFO] [stderr] warning: `qsar` (manifest) generated 1 warning
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]    Compiling zerocopy v0.8.30
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling time-core v0.1.6
[INFO] [stderr]    Compiling num-conv v0.1.0
[INFO] [stderr]    Compiling deranged v0.5.5
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling syn v2.0.111
[INFO] [stderr]    Compiling slog v2.8.2
[INFO] [stderr]    Compiling linfa v0.6.1
[INFO] [stderr]    Compiling anyhow v1.0.100
[INFO] [stderr]    Compiling iana-time-zone v0.1.64
[INFO] [stderr]    Compiling slog-async v2.8.0
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling term v1.2.0
[INFO] [stderr]    Compiling simd-adler32 v0.3.7
[INFO] [stderr]    Compiling time-macros v0.2.24
[INFO] [stderr]    Compiling take_mut v0.2.2
[INFO] [stderr]    Compiling instant v0.1.13
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling flate2 v1.1.5
[INFO] [stderr]    Compiling getrandom v0.2.16
[INFO] [stderr]    Compiling is-terminal v0.4.17
[INFO] [stderr]    Compiling time v0.3.44
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling approx v0.4.0
[INFO] [stderr]    Compiling chrono v0.4.42
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling num-bigint v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.45
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling csv v1.4.0
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling num v0.4.3
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling erased-serde v0.3.31
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_xorshift v0.3.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling slog-term v2.9.2
[INFO] [stderr]    Compiling slog-json v2.6.1
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling ndarray-rand v0.14.0
[INFO] [stderr]    Compiling ndarray-csv v0.5.1
[INFO] [stderr]    Compiling linfa-linalg v0.1.0
[INFO] [stderr]    Compiling argmin v0.4.7
[INFO] [stderr]    Compiling linfa-datasets v0.6.1
[INFO] [stderr]    Compiling linfa-linear v0.6.1
[INFO] [stderr]    Compiling qsar v0.0.3 (/opt/rustwide/workdir)
[INFO] [stdout] error[E0583]: file not found for module `models`
[INFO] [stdout]   --> src/lib.rs:55:1
[INFO] [stdout]    |
[INFO] [stdout] 55 | pub mod models;
[INFO] [stdout]    | ^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: to create the module `models`, create file "src/models.rs" or "src/models/mod.rs"
[INFO] [stdout]    = note: if there is a `mod models` elsewhere in the crate already, import it with `use crate::...` instead
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0432]: unresolved imports `super::DescriptorError`, `super::atomic_weights`
[INFO] [stdout]   --> src/descriptors/physicochemical.rs:65:13
[INFO] [stdout]    |
[INFO] [stdout] 65 | use super::{DescriptorError, atomic_weights};
[INFO] [stdout]    |             ^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^ no `atomic_weights` in `descriptors`
[INFO] [stdout]    |             |
[INFO] [stdout]    |             no `DescriptorError` in `descriptors`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0432]: unresolved imports `super::DescriptorError`, `super::parse_atoms_basic`
[INFO] [stdout]   --> src/descriptors/constitutional.rs:48:13
[INFO] [stdout]    |
[INFO] [stdout] 48 | use super::{DescriptorError, parse_atoms_basic};
[INFO] [stdout]    |             ^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^ no `parse_atoms_basic` in `descriptors`
[INFO] [stdout]    |             |
[INFO] [stdout]    |             no `DescriptorError` in `descriptors`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0432]: unresolved import `super::DescriptorError`
[INFO] [stdout]   --> src/descriptors/topological.rs:53:5
[INFO] [stdout]    |
[INFO] [stdout] 53 | use super::DescriptorError;
[INFO] [stdout]    |     ^^^^^^^---------------
[INFO] [stdout]    |            |
[INFO] [stdout]    |            no `DescriptorError` in `descriptors`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0432]: unresolved import `physicochemical::molecular_weight`
[INFO] [stdout]   --> src/lib.rs:72:13
[INFO] [stdout]    |
[INFO] [stdout] 72 |     pub use physicochemical::molecular_weight;
[INFO] [stdout]    |             ^^^^^^^^^^^^^^^^^----------------
[INFO] [stdout]    |                              |
[INFO] [stdout]    |                              no `molecular_weight` in `descriptors::physicochemical`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0425]: cannot find type `AtomInfo` in module `super`
[INFO] [stdout]    --> src/descriptors/constitutional.rs:106:38
[INFO] [stdout]     |
[INFO] [stdout] 106 | fn count_heteroatoms(atoms: &[super::AtomInfo]) -> usize {
[INFO] [stdout]     |                                      ^^^^^^^^ not found in `super`
[INFO] [stdout]     |
[INFO] [stdout] note: struct `crate::descriptors::fingerprint::AtomInfo` exists but is inaccessible
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:211:1
[INFO] [stdout]     |
[INFO] [stdout] 211 | struct AtomInfo {
[INFO] [stdout]     | ^^^^^^^^^^^^^^^ not accessible
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::collections::HashMap`
[INFO] [stdout]   --> src/descriptors/physicochemical.rs:63:5
[INFO] [stdout]    |
[INFO] [stdout] 63 | use std::collections::HashMap;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `HashMap`
[INFO] [stdout]   --> src/descriptors/fingerprint.rs:36:24
[INFO] [stdout]    |
[INFO] [stdout] 36 | use std::collections::{HashMap, HashSet};
[INFO] [stdout]    |                        ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/physicochemical.rs:171:56
[INFO] [stdout]     |
[INFO] [stdout] 171 | fn common_valence(element: &str, is_aromatic: bool) -> usize { /* ... */ }
[INFO] [stdout]     |    --------------                                      ^^^^^ expected `usize`, found `()`
[INFO] [stdout]     |    |
[INFO] [stdout]     |    implicitly returns `()` as its body has no tail or `return` expression
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/physicochemical.rs:172:91
[INFO] [stdout]     |
[INFO] [stdout] 172 | fn implicit_hydrogens(element: &str, previous_atoms: &[ParsedAtom], is_aromatic: bool) -> usize { /* ... */ }
[INFO] [stdout]     |    ------------------                                                                     ^^^^^ expected `usize`, found `()`
[INFO] [stdout]     |    |
[INFO] [stdout]     |    implicitly returns `()` as its body has no tail or `return` expression
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/physicochemical.rs:174:50
[INFO] [stdout]     |
[INFO] [stdout] 174 | fn wildman_crippen_logp(atoms: &[ParsedAtom]) -> f64 { /* ... */ }
[INFO] [stdout]     |    --------------------                          ^^^ expected `f64`, found `()`
[INFO] [stdout]     |    |
[INFO] [stdout]     |    implicitly returns `()` as its body has no tail or `return` expression
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/physicochemical.rs:175:39
[INFO] [stdout]     |
[INFO] [stdout] 175 | fn ertl_tpsa(atoms: &[ParsedAtom]) -> f64 { /* ... */ }
[INFO] [stdout]     |    ---------                          ^^^ expected `f64`, found `()`
[INFO] [stdout]     |    |
[INFO] [stdout]     |    implicitly returns `()` as its body has no tail or `return` expression
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/physicochemical.rs:176:59
[INFO] [stdout]     |
[INFO] [stdout] 176 | fn count_h_bond_donors_acceptors(atoms: &[ParsedAtom]) -> (usize, usize) { /* ... */ }
[INFO] [stdout]     |    -----------------------------                          ^^^^^^^^^^^^^^ expected `(usize, usize)`, found `()`
[INFO] [stdout]     |    |
[INFO] [stdout]     |    implicitly returns `()` as its body has no tail or `return` expression
[INFO] [stdout]     |
[INFO] [stdout]     = note:  expected tuple `(usize, usize)`
[INFO] [stdout]             found unit type `()`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0609]: no field `index` on type `&AtomInfo`
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:228:53
[INFO] [stdout]     |
[INFO] [stdout] 228 |         bonds.iter().filter(|&&(a, b, _)| a == self.index || b == self.index).count()
[INFO] [stdout]     |                                                     ^^^^^ unknown field
[INFO] [stdout]     |
[INFO] [stdout]     = note: available fields are: `element`, `h_count`, `aromatic`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0609]: no field `index` on type `&AtomInfo`
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:228:72
[INFO] [stdout]     |
[INFO] [stdout] 228 |         bonds.iter().filter(|&&(a, b, _)| a == self.index || b == self.index).count()
[INFO] [stdout]     |                                                                        ^^^^^ unknown field
[INFO] [stdout]     |
[INFO] [stdout]     = note: available fields are: `element`, `h_count`, `aromatic`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0308]: mismatched types
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:298:23
[INFO] [stdout]     |
[INFO] [stdout] 298 |         dist[a][b] =  dist[b][a] = 1;
[INFO] [stdout]     |         ----------    ^^^^^^^^^^^^^^ expected `u32`, found `()`
[INFO] [stdout]     |         |
[INFO] [stdout]     |         expected due to the type of this binding
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `atom`
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:116:17
[INFO] [stdout]     |
[INFO] [stdout] 116 |         for (i, atom) in atoms.iter().enumerate() {
[INFO] [stdout]     |                 ^^^^ help: if this is intentional, prefix it with an underscore: `_atom`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `bonds`
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:315:28
[INFO] [stdout]     |
[INFO] [stdout] 315 | fn enumerate_torsion_paths(bonds: &[(usize, usize, u8)], n_atoms: usize) -> Vec<Vec<usize>> {
[INFO] [stdout]     |                            ^^^^^ help: if this is intentional, prefix it with an underscore: `_bonds`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `n_atoms`
[INFO] [stdout]    --> src/descriptors/fingerprint.rs:315:58
[INFO] [stdout]     |
[INFO] [stdout] 315 | fn enumerate_torsion_paths(bonds: &[(usize, usize, u8)], n_atoms: usize) -> Vec<Vec<usize>> {
[INFO] [stdout]     |                                                          ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_n_atoms`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0308, E0425, E0432, E0583, E0609.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0308`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `qsar` (lib) due to 14 previous errors; 5 warnings emitted
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] warning: unused dependency `linfa-datasets`
[INFO] [stderr]  --> Cargo.toml:4:1
[INFO] [stderr]   |
[INFO] [stderr] 4 | linfa-datasets = "0.6"
[INFO] [stderr]   | ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `cargo::unused_dependencies` is set to `warn` by default
[INFO] [stderr] help: consider removing the dependency on `linfa-datasets`
[INFO] [stderr] warning: unused dependency `linfa-linear`
[INFO] [stderr]  --> Cargo.toml:5:1
[INFO] [stderr]   |
[INFO] [stderr] 5 | linfa-linear = "0.6"
[INFO] [stderr]   | ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr] help: consider removing the dependency on `linfa-linear`
[INFO] [stderr] warning: unused dependency `once_cell`
[INFO] [stderr]  --> Cargo.toml:7:1
[INFO] [stderr]   |
[INFO] [stderr] 7 | once_cell = "1.17"
[INFO] [stderr]   | ^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr] help: consider removing the dependency on `once_cell`
[INFO] [stderr] warning: `qsar` (manifest) generated 3 warnings
[INFO] running `Command { std: "docker" "inspect" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9", kill_on_drop: false }`
[INFO] [stdout] 98cd104b533e59b145cee22eae471bff46cc84fa7ccb32a018962045dfba33a9
