[INFO] cloning repository https://github.com/alvgeppetto/loom [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/alvgeppetto/loom" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 62f111d1ff71bfb21bbf1aa1ffb8142c17571d0a [INFO] testing alvgeppetto/loom against 1.97.0-beta.6+cargoflags=--release for beta-1.98-release-3 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-6-tc1/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/alvgeppetto/loom [INFO] finished tweaking git repo https://github.com/alvgeppetto/loom [INFO] tweaked toml for git repo https://github.com/alvgeppetto/loom written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/alvgeppetto/loom on toolchain 1.97.0-beta.6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/alvgeppetto/loom already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded wasm-bindgen-macro v0.2.113 [INFO] [stderr] Downloaded cobs v0.3.0 [INFO] [stderr] Downloaded wasm-bindgen-macro-support v0.2.113 [INFO] [stderr] Downloaded wasm-bindgen-shared v0.2.113 [INFO] [stderr] Downloaded hash32 v0.2.1 [INFO] [stderr] Downloaded ghash v0.5.1 [INFO] [stderr] Downloaded universal-hash v0.5.1 [INFO] [stderr] Downloaded aead v0.5.2 [INFO] [stderr] Downloaded serde-wasm-bindgen v0.6.5 [INFO] [stderr] Downloaded embedded-io v0.6.1 [INFO] [stderr] Downloaded critical-section v1.2.0 [INFO] [stderr] Downloaded argon2 v0.5.3 [INFO] [stderr] Downloaded password-hash v0.5.0 [INFO] [stderr] Downloaded base64ct v1.8.3 [INFO] [stderr] Downloaded ctr v0.9.2 [INFO] [stderr] Downloaded tempfile v3.26.0 [INFO] [stderr] Downloaded postcard v1.1.3 [INFO] [stderr] Downloaded getrandom v0.4.1 [INFO] [stderr] Downloaded wasm-bindgen v0.2.113 [INFO] [stderr] Downloaded polyval v0.6.2 [INFO] [stderr] Downloaded heapless v0.7.17 [INFO] [stderr] Downloaded js-sys v0.3.90 [INFO] [stderr] Downloaded zerocopy-derive v0.8.40 [INFO] [stderr] Downloaded vers-vecs v1.9.0 [INFO] [stderr] Downloaded hkdf v0.12.4 [INFO] [stderr] Downloaded aes-gcm v0.10.3 [INFO] [stderr] Downloaded zerocopy v0.8.40 [INFO] [stderr] Downloaded rustls v0.23.37 [INFO] [stderr] Downloaded fm-index v0.2.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:00c5645b54fe3ce5dae1417175e3c7fb6a6646c021d554ecd63a097b8b9f3602" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] 7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf [INFO] running `Command { std: "docker" "start" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "build" "--frozen" "--message-format=json" "--release", kill_on_drop: false }` [INFO] [stderr] Compiling unicode-ident v1.0.24 [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling quote v1.0.44 [INFO] [stderr] Compiling libc v0.2.182 [INFO] [stderr] Compiling cfg-if v1.0.4 [INFO] [stderr] Compiling version_check v0.9.5 [INFO] [stderr] Compiling typenum v1.19.0 [INFO] [stderr] Compiling stable_deref_trait v1.2.1 [INFO] [stderr] Compiling subtle v2.6.1 [INFO] [stderr] Compiling find-msvc-tools v0.1.9 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling cc v1.2.56 [INFO] [stderr] Compiling wasm-bindgen-shared v0.2.113 [INFO] [stderr] Compiling generic-array v0.14.7 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling writeable v0.6.2 [INFO] [stderr] Compiling litemap v0.8.1 [INFO] [stderr] Compiling cpufeatures v0.2.17 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling icu_properties_data v2.1.2 [INFO] [stderr] Compiling icu_normalizer_data v2.1.1 [INFO] [stderr] Compiling semver v1.0.27 [INFO] [stderr] Compiling autocfg v1.5.0 [INFO] [stderr] Compiling zerocopy v0.8.40 [INFO] [stderr] Compiling zeroize v1.8.2 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling getrandom v0.2.17 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling memchr v2.8.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling rustls-pki-types v1.14.0 [INFO] [stderr] Compiling rustc_version v0.4.1 [INFO] [stderr] Compiling crypto-common v0.1.7 [INFO] [stderr] Compiling block-buffer v0.10.4 [INFO] [stderr] Compiling inout v0.1.4 [INFO] [stderr] Compiling digest v0.10.7 [INFO] [stderr] Compiling ring v0.17.14 [INFO] [stderr] Compiling smallvec v1.15.1 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Compiling scopeguard v1.2.0 [INFO] [stderr] Compiling bumpalo v3.20.2 [INFO] [stderr] Compiling zmij v1.0.21 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling wasm-bindgen v0.2.113 [INFO] [stderr] Compiling lock_api v0.4.14 [INFO] [stderr] Compiling cipher v0.4.4 [INFO] [stderr] Compiling heapless v0.7.17 [INFO] [stderr] Compiling universal-hash v0.5.1 [INFO] [stderr] Compiling untrusted v0.9.0 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling simd-adler32 v0.3.8 [INFO] [stderr] Compiling getrandom v0.4.1 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling itoa v1.0.17 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling opaque-debug v0.3.1 [INFO] [stderr] Compiling rustix v1.1.4 [INFO] [stderr] Compiling hash32 v0.2.1 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling polyval v0.6.2 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling spin v0.9.8 [INFO] [stderr] Compiling anstyle v1.0.13 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling percent-encoding v2.3.2 [INFO] [stderr] Compiling anstyle-query v1.1.5 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.2 [INFO] [stderr] Compiling portable-atomic v1.13.1 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling base64ct v1.8.3 [INFO] [stderr] Compiling utf8_iter v1.0.4 [INFO] [stderr] Compiling rustls v0.23.37 [INFO] [stderr] Compiling bitflags v2.11.0 [INFO] [stderr] Compiling linux-raw-sys v0.12.1 [INFO] [stderr] Compiling password-hash v0.5.0 [INFO] [stderr] Compiling anstream v0.6.21 [INFO] [stderr] Compiling form_urlencoded v1.2.2 [INFO] [stderr] Compiling flate2 v1.1.9 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling ghash v0.5.1 [INFO] [stderr] Compiling aes v0.8.4 [INFO] [stderr] Compiling ctr v0.9.2 [INFO] [stderr] Compiling webpki-roots v1.0.6 [INFO] [stderr] Compiling hmac v0.12.1 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling wasm-bindgen-macro-support v0.2.113 [INFO] [stderr] Compiling blake2 v0.10.6 [INFO] [stderr] Compiling aead v0.5.2 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling log v0.4.29 [INFO] [stderr] Compiling fastrand v2.3.0 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling strsim v0.11.1 [INFO] [stderr] Compiling unicode-width v0.2.2 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling clap_lex v1.0.0 [INFO] [stderr] Compiling clap_builder v4.5.60 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling clap_derive v4.5.55 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.8.1 [INFO] [stderr] Compiling zerovec v0.11.5 [INFO] [stderr] Compiling zerotrie v0.2.3 [INFO] [stderr] Compiling cobs v0.3.0 [INFO] [stderr] Compiling wasm-bindgen-macro v0.2.113 [INFO] [stderr] Compiling tinystr v0.8.2 [INFO] [stderr] Compiling potential_utf v0.1.4 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling icu_collections v2.1.1 [INFO] [stderr] Compiling icu_locale_core v2.1.1 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling tempfile v3.26.0 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling icu_provider v2.1.1 [INFO] [stderr] Compiling js-sys v0.3.90 [INFO] [stderr] Compiling icu_properties v2.1.2 [INFO] [stderr] Compiling icu_normalizer v2.1.1 [INFO] [stderr] Compiling aes-gcm v0.10.3 [INFO] [stderr] Compiling argon2 v0.5.3 [INFO] [stderr] Compiling hkdf v0.12.4 [INFO] [stderr] Compiling vers-vecs v1.9.0 [INFO] [stderr] Compiling idna_adapter v1.2.1 [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling idna v1.1.0 [INFO] [stderr] Compiling postcard v1.1.3 [INFO] [stderr] Compiling url v2.5.8 [INFO] [stderr] Compiling webpki-roots v0.26.11 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling rustls-webpki v0.103.9 [INFO] [stderr] Compiling fm-index v0.2.0 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling sha2 v0.10.9 [INFO] [stderr] Compiling iana-time-zone v0.1.65 [INFO] [stderr] Compiling ryu v1.0.23 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling base64 v0.22.1 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling brenda v0.1.0 (/opt/rustwide/workdir/brenda) [INFO] [stderr] Compiling chrono v0.4.44 [INFO] [stderr] Compiling clap v4.5.60 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling serde-wasm-bindgen v0.6.5 [INFO] [stderr] Compiling ureq v2.12.1 [INFO] [stderr] Compiling loom v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `novelty_score` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 26 | struct NovelRegion { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 31 | novelty_score: f64, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `total_guides` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 36 | struct PublishedDb { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] 37 | total_guides: usize, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stdout] --> src/dna/guide_novelty.rs:48:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct PublishedGuide { [INFO] [stdout] | -------------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 48 | pmid: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 49 | #[serde(default)] [INFO] [stdout] 50 | gene: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 51 | #[serde(default)] [INFO] [stdout] 52 | wuhan_hu1_pos: Option, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] 53 | length: usize, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stdout] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stdout] | [INFO] [stdout] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct OntologyPathogen { [INFO] [stdout] | ---------------- fields in this struct [INFO] [stdout] 43 | species: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 44 | genes: Option, [INFO] [stdout] 45 | disease_ontology: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] 46 | taxonomy: Option, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 50 | struct OntologyGenes { [INFO] [stdout] | ------------- fields in this struct [INFO] [stdout] 51 | reference_accession: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 52 | gene_count: Option, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `gene_id` and `gene_type` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stdout] | [INFO] [stdout] 57 | struct OntologyGene { [INFO] [stdout] | ------------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 60 | gene_id: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 61 | #[serde(rename = "type")] [INFO] [stdout] 62 | gene_type: Option, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `name` and `synonyms` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stdout] | [INFO] [stdout] 66 | struct DiseaseOntology { [INFO] [stdout] | --------------- fields in this struct [INFO] [stdout] 67 | name: Option, [INFO] [stdout] | ^^^^ [INFO] [stdout] 68 | synonyms: Option>, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `scientific_name` is never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stdout] | [INFO] [stdout] 72 | struct Taxonomy { [INFO] [stdout] | -------- field in this struct [INFO] [stdout] 73 | scientific_name: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `release` profile [optimized] target(s) in 4m 39s [INFO] running `Command { std: "docker" "inspect" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen" "--no-run" "--message-format=json" "--release", kill_on_drop: false }` [INFO] [stderr] Compiling parking_lot_core v0.9.12 [INFO] [stderr] Compiling errno v0.3.14 [INFO] [stderr] Compiling tokio-macros v2.6.0 [INFO] [stderr] Compiling mio v1.1.1 [INFO] [stdout] warning: field `novelty_score` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 26 | struct NovelRegion { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 31 | novelty_score: f64, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling socket2 v0.6.2 [INFO] [stdout] warning: field `total_guides` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 36 | struct PublishedDb { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] 37 | total_guides: usize, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling pin-project-lite v0.2.16 [INFO] [stderr] Compiling bytes v1.11.1 [INFO] [stdout] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stdout] --> src/dna/guide_novelty.rs:48:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct PublishedGuide { [INFO] [stdout] | -------------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 48 | pmid: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 49 | #[serde(default)] [INFO] [stdout] 50 | gene: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 51 | #[serde(default)] [INFO] [stdout] 52 | wuhan_hu1_pos: Option, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] 53 | length: usize, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stdout] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stdout] | [INFO] [stdout] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct OntologyPathogen { [INFO] [stdout] | ---------------- fields in this struct [INFO] [stdout] 43 | species: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 44 | genes: Option, [INFO] [stdout] 45 | disease_ontology: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] 46 | taxonomy: Option, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 50 | struct OntologyGenes { [INFO] [stdout] | ------------- fields in this struct [INFO] [stdout] 51 | reference_accession: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 52 | gene_count: Option, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `gene_id` and `gene_type` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stdout] | [INFO] [stdout] 57 | struct OntologyGene { [INFO] [stdout] | ------------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 60 | gene_id: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 61 | #[serde(rename = "type")] [INFO] [stdout] 62 | gene_type: Option, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `name` and `synonyms` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stdout] | [INFO] [stdout] 66 | struct DiseaseOntology { [INFO] [stdout] | --------------- fields in this struct [INFO] [stdout] 67 | name: Option, [INFO] [stdout] | ^^^^ [INFO] [stdout] 68 | synonyms: Option>, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `scientific_name` is never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stdout] | [INFO] [stdout] 72 | struct Taxonomy { [INFO] [stdout] | -------- field in this struct [INFO] [stdout] 73 | scientific_name: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling signal-hook-registry v1.4.8 [INFO] [stderr] Compiling parking_lot v0.12.5 [INFO] [stderr] Compiling tokio v1.49.0 [INFO] [stderr] Compiling loom v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `novelty_score` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 26 | struct NovelRegion { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 31 | novelty_score: f64, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `total_guides` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 36 | struct PublishedDb { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] 37 | total_guides: usize, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stdout] --> src/dna/guide_novelty.rs:48:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct PublishedGuide { [INFO] [stdout] | -------------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 48 | pmid: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 49 | #[serde(default)] [INFO] [stdout] 50 | gene: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 51 | #[serde(default)] [INFO] [stdout] 52 | wuhan_hu1_pos: Option, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] 53 | length: usize, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stdout] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stdout] | [INFO] [stdout] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct OntologyPathogen { [INFO] [stdout] | ---------------- fields in this struct [INFO] [stdout] 43 | species: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 44 | genes: Option, [INFO] [stdout] 45 | disease_ontology: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] 46 | taxonomy: Option, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 50 | struct OntologyGenes { [INFO] [stdout] | ------------- fields in this struct [INFO] [stdout] 51 | reference_accession: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 52 | gene_count: Option, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `gene_id` and `gene_type` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stdout] | [INFO] [stdout] 57 | struct OntologyGene { [INFO] [stdout] | ------------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 60 | gene_id: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 61 | #[serde(rename = "type")] [INFO] [stdout] 62 | gene_type: Option, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `name` and `synonyms` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stdout] | [INFO] [stdout] 66 | struct DiseaseOntology { [INFO] [stdout] | --------------- fields in this struct [INFO] [stdout] 67 | name: Option, [INFO] [stdout] | ^^^^ [INFO] [stdout] 68 | synonyms: Option>, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `scientific_name` is never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stdout] | [INFO] [stdout] 72 | struct Taxonomy { [INFO] [stdout] | -------- field in this struct [INFO] [stdout] 73 | scientific_name: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `release` profile [optimized] target(s) in 1m 17s [INFO] running `Command { std: "docker" "inspect" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen" "--release", kill_on_drop: false }` [INFO] [stderr] warning: field `novelty_score` is never read [INFO] [stderr] --> src/dna/guide_novelty.rs:31:5 [INFO] [stderr] | [INFO] [stderr] 26 | struct NovelRegion { [INFO] [stderr] | ----------- field in this struct [INFO] [stderr] ... [INFO] [stderr] 31 | novelty_score: f64, [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: field `total_guides` is never read [INFO] [stderr] --> src/dna/guide_novelty.rs:37:5 [INFO] [stderr] | [INFO] [stderr] 36 | struct PublishedDb { [INFO] [stderr] | ----------- field in this struct [INFO] [stderr] 37 | total_guides: usize, [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stderr] --> src/dna/guide_novelty.rs:48:5 [INFO] [stderr] | [INFO] [stderr] 42 | struct PublishedGuide { [INFO] [stderr] | -------------- fields in this struct [INFO] [stderr] ... [INFO] [stderr] 48 | pmid: String, [INFO] [stderr] | ^^^^ [INFO] [stderr] 49 | #[serde(default)] [INFO] [stderr] 50 | gene: String, [INFO] [stderr] | ^^^^ [INFO] [stderr] 51 | #[serde(default)] [INFO] [stderr] 52 | wuhan_hu1_pos: Option, [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] 53 | length: usize, [INFO] [stderr] | ^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stderr] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stderr] | [INFO] [stderr] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stderr] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stderr] | [INFO] [stderr] 42 | struct OntologyPathogen { [INFO] [stderr] | ---------------- fields in this struct [INFO] [stderr] 43 | species: Option, [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] 44 | genes: Option, [INFO] [stderr] 45 | disease_ontology: Option, [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] 46 | taxonomy: Option, [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stderr] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stderr] | [INFO] [stderr] 50 | struct OntologyGenes { [INFO] [stderr] | ------------- fields in this struct [INFO] [stderr] 51 | reference_accession: Option, [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] 52 | gene_count: Option, [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: fields `gene_id` and `gene_type` are never read [INFO] [stderr] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stderr] | [INFO] [stderr] 57 | struct OntologyGene { [INFO] [stderr] | ------------ fields in this struct [INFO] [stderr] ... [INFO] [stderr] 60 | gene_id: Option, [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] 61 | #[serde(rename = "type")] [INFO] [stderr] 62 | gene_type: Option, [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: fields `name` and `synonyms` are never read [INFO] [stderr] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stderr] | [INFO] [stderr] 66 | struct DiseaseOntology { [INFO] [stderr] | --------------- fields in this struct [INFO] [stderr] 67 | name: Option, [INFO] [stderr] | ^^^^ [INFO] [stderr] 68 | synonyms: Option>, [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: field `scientific_name` is never read [INFO] [stderr] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stderr] | [INFO] [stderr] 72 | struct Taxonomy { [INFO] [stderr] | -------- field in this struct [INFO] [stderr] 73 | scientific_name: Option, [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: `loom` (lib) generated 9 warnings [INFO] [stderr] warning: `loom` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `release` profile [optimized] target(s) in 0.34s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/release/deps/loom-4de8210bd02f1984) [INFO] [stdout] [INFO] [stdout] running 61 tests [INFO] [stdout] test dna::benchmark::tests::format_utc_timestamp_epoch ... ok [INFO] [stdout] test dna::benchmark::tests::format_utc_timestamp_known_date ... ok [INFO] [stdout] test dna::benchmark::tests::metrics_miss_retrieval ... ok [INFO] [stdout] test dna::benchmark::tests::metrics_perfect_retrieval ... ok [INFO] [stdout] test dna::benchmark::tests::plain_index_finds_exact_match ... ok [INFO] [stdout] test dna::benchmark::tests::plain_index_returns_empty_for_no_match ... ok [INFO] [stdout] test dna::benchmark::tests::count_occurrences_basic ... ok [INFO] [stdout] test dna::compare::tests::compare_identical_reports_zero_delta ... ok [INFO] [stdout] test dna::compare::tests::all_kpi_pass_gives_pass_verdict ... ok [INFO] [stdout] test dna::compare::tests::high_latency_gives_fail_verdict ... ok [INFO] [stdout] test dna::compare::tests::metric_delta_relative_zero_baseline ... ok [INFO] [stdout] test dna::compare::tests::low_hit_at_k_gives_fail_verdict ... ok [INFO] [stdout] test dna::corpus::tests::detect_gzip_fastq ... ok [INFO] [stdout] test dna::corpus::tests::detect_plain_fasta ... ok [INFO] [stdout] test dna::corpus::tests::parses_fastq_records_with_normalization ... ok [INFO] [stdout] test dna::corpus::tests::detect_unknown_extension_errors ... ok [INFO] [stdout] test dna::corpus::tests::stream_fasta_basic ... ok [INFO] [stdout] test dna::corpus::tests::stream_fasta_filters_by_min_len ... ok [INFO] [stdout] test dna::corpus::tests::detect_xz_fasta ... ok [INFO] [stdout] test dna::corpus::tests::stream_fasta_multiline_sequence ... ok [INFO] [stdout] test dna::corpus::tests::stream_fasta_ignores_semicolon_comments ... ok [INFO] [stdout] test dna::corpus::tests::stream_fastq_basic ... ok [INFO] [stdout] test dna::corpus::tests::parses_fasta_records_with_normalization ... ok [INFO] [stdout] test dna::corpus::tests::stream_fastq_rejects_bad_header ... ok [INFO] [stdout] test dna::compare::tests::render_markdown_contains_key_sections ... ok [INFO] [stdout] test dna::compare::tests::large_regression_gives_fail_verdict ... ok [INFO] [stdout] test dna::corpus::tests::stream_fastq_rejects_missing_plus_separator ... ok [INFO] [stdout] test dna::corpus::tests::stream_fastq_rejects_quality_length_mismatch ... ok [INFO] [stdout] test dna::crispr_scan::tests::ambiguous_bases_reset_window ... ok [INFO] [stdout] test dna::crispr_scan::tests::pam_ngg_detected ... ok [INFO] [stdout] test dna::latency::tests::cold_is_first_sample_warm_excludes_it ... ok [INFO] [stdout] test dna::crispr_scan::tests::pam_tttn_detected ... ok [INFO] [stdout] test dna::crispr_scan::tests::scan_small_sequence ... ok [INFO] [stdout] test dna::latency::tests::percentile_sorted_edge_cases ... ok [INFO] [stdout] test dna::latency::tests::returns_none_for_empty_input ... ok [INFO] [stdout] test dna::latency::tests::single_sample_populates_all_fields ... ok [INFO] [stdout] test dna::latency::tests::time_call_returns_result_and_positive_elapsed ... ok [INFO] [stdout] test dna::benchmark::tests::run_benchmark_on_synthetic_corpus ... ok [INFO] [stdout] test dna::corpus::tests::stream_gz_fasta_round_trip ... ok [INFO] [stdout] test dna::manifest::tests::builds_manifest_with_checksums_and_metadata ... ok [INFO] [stdout] test dna::offtarget::tests::hamming_identical_is_zero ... ok [INFO] [stdout] test dna::offtarget::tests::hamming_one_mismatch ... ok [INFO] [stdout] test dna::manifest::tests::writes_manifest_json ... ok [INFO] [stdout] test dna::offtarget::tests::encode_decode_round_trip ... ok [INFO] [stdout] test dna::latency::tests::p95_and_p99_on_100_sample_range ... ok [INFO] [stdout] test dna::offtarget::tests::no_duplicate_hits ... ok [INFO] [stdout] test dna::offtarget::tests::one_mismatch_found ... ok [INFO] [stdout] test dna::offtarget::tests::no_hit_beyond_threshold ... ok [INFO] [stdout] test dna::offtarget::tests::rc_complement_and_reverse ... ok [INFO] [stdout] test dna::tests::maps_iupac_ambiguity_codes_to_n ... ok [INFO] [stdout] test dna::offtarget::tests::rc_strand_detected ... ok [INFO] [stdout] test dna::tests::removes_non_sequence_characters ... ok [INFO] [stdout] test wasm::tests::enrichment_falls_back_when_ontology_missing ... ok [INFO] [stdout] test dna::tests::keeps_canonical_bases ... ok [INFO] [stdout] test wasm::tests::malformed_ontology_payload_does_not_break_boot ... ok [INFO] [stdout] test wasm::tests::enrichment_uses_embedded_ontology_terms ... ok [INFO] [stdout] test wasm::tests::parses_ontology_and_returns_related_terms ... ok [INFO] [stdout] test dna::tests::uppercases_and_maps_u_to_t ... ok [INFO] [stdout] test dna::crispr_scan::tests::encode_decode_roundtrip ... ok [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/release/deps/loom-156c5f942bb9cb14) [INFO] [stdout] test dna::offtarget::tests::exact_match_found ... ok [INFO] [stdout] test dna::offtarget::tests::hamming_all_mismatch ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 61 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/encrypt_tests.rs (/opt/rustwide/target/release/deps/encrypt_tests-3e9c29eb00e2ce5c) [INFO] [stdout] [INFO] [stdout] running 14 tests [INFO] [stdout] test test_blind_index_correct_key_finds_terms ... ok [INFO] [stdout] test test_encrypt_decrypt_roundtrip ... ok [INFO] [stdout] test test_blind_flag ... ok [INFO] [stdout] test test_blind_index_unkeyed_search_returns_zero ... ok [INFO] [stdout] test test_blind_permutation_overhead_sanity ... FAILED [INFO] [stdout] test test_decrypt_wrong_key_returns_error ... ok [INFO] [stdout] test test_encrypted_file_magic ... ok [INFO] [stdout] test test_encrypt_decrypt_roundtrip_password_api ... ok [INFO] [stdout] test test_permuter_deterministic ... ok [INFO] [stdout] test test_permuter_roundtrip ... ok [INFO] [stdout] test test_search_after_decrypt ... ok [INFO] [stdout] test test_permuter_different_keys_differ ... ok [INFO] [stdout] test test_cli_search_encrypted_blind_index_with_key_succeeds ... ok [INFO] [stdout] test test_encrypt_password_wrong_password_fails ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- test_blind_permutation_overhead_sanity stdout ---- [INFO] [stdout] Plain: 55.0ms Blind: 92.0ms Overhead: 67.3% [INFO] [stdout] [INFO] [stdout] thread 'test_blind_permutation_overhead_sanity' (3321) panicked at tests/encrypt_tests.rs:368:9: [INFO] [stdout] Blind index overhead too large: 67.3% (target < 5%, CI limit < 20%) [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x63176091cec9 - <::print::DisplayBacktrace as core[8fb95b77d25ab6c8]::fmt::Display>::fmt [INFO] [stdout] 1: 0x6317608b986a - core[8fb95b77d25ab6c8]::fmt::write [INFO] [stdout] 2: 0x631760923326 - as std[10d71ac2c42b111e]::io::Write>::write_fmt [INFO] [stdout] 3: 0x6317608f57c6 - std[10d71ac2c42b111e]::panicking::default_hook::{closure#0} [INFO] [stdout] 4: 0x631760914661 - std[10d71ac2c42b111e]::panicking::default_hook [INFO] [stdout] 5: 0x631760914842 - std[10d71ac2c42b111e]::panicking::panic_with_hook [INFO] [stdout] 6: 0x6317608f5882 - std[10d71ac2c42b111e]::panicking::panic_handler::{closure#0} [INFO] [stdout] 7: 0x6317608ea769 - std[10d71ac2c42b111e]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stdout] 8: 0x6317608fa8ad - __rustc[3be9ba60078d4c86]::rust_begin_unwind [INFO] [stdout] 9: 0x6317608b9f5c - core[8fb95b77d25ab6c8]::panicking::panic_fmt [INFO] [stdout] 10: 0x6317608c7e87 - >::call_once [INFO] [stdout] 11: 0x63176092680b - test[213991da798b1c03]::__rust_begin_short_backtrace::, fn() -> core[8fb95b77d25ab6c8]::result::Result<(), alloc[a7ee25936407c584]::string::String>> [INFO] [stdout] 12: 0x631760935051 - test[213991da798b1c03]::run_test::{closure#0} [INFO] [stdout] 13: 0x63176092e7a4 - std[10d71ac2c42b111e]::sys::backtrace::__rust_begin_short_backtrace:: [INFO] [stdout] 14: 0x631760939002 - ::{closure#1} as core[8fb95b77d25ab6c8]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0} [INFO] [stdout] 15: 0x63176091bd54 - ::new::thread_start [INFO] [stdout] 16: 0x79dccc11a07a - [INFO] [stdout] 17: 0x79dccc1ad534 - clone [INFO] [stdout] 18: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] test_blind_permutation_overhead_sanity [INFO] [stdout] [INFO] [stdout] test result: FAILED. 13 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.54s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--test encrypt_tests` [INFO] running `Command { std: "docker" "inspect" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf", kill_on_drop: false }` [INFO] [stdout] 7eab141bc30e3a20140d6ab879e3d7a648c827680fca72dbd44901ad3da77baf