[INFO] cloning repository https://github.com/madhavajay/samtools-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/madhavajay/samtools-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmadhavajay%2Fsamtools-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmadhavajay%2Fsamtools-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e0a5a5d9ed60efa2f514fbca8a8b6f1659f4c3a9
[INFO] testing madhavajay/samtools-rs against 1.98.0-beta.1 for beta-1.98-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmadhavajay%2Fsamtools-rs" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/madhavajay/samtools-rs
[INFO] finished tweaking git repo https://github.com/madhavajay/samtools-rs
[INFO] tweaked toml for git repo https://github.com/madhavajay/samtools-rs written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/madhavajay/samtools-rs on toolchain 1.98.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/madhavajay/samtools-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3
[INFO] running `Command { std: "docker" "start" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling bytes v1.11.1
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling typenum v1.20.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling libc v0.2.186
[INFO] [stderr]    Compiling futures-core v0.3.32
[INFO] [stderr]    Compiling pin-project-lite v0.2.17
[INFO] [stderr]    Compiling bitflags v2.11.1
[INFO] [stderr]    Compiling writeable v0.6.3
[INFO] [stderr]    Compiling zlib-rs v0.6.3
[INFO] [stderr]    Compiling itoa v1.0.18
[INFO] [stderr]    Compiling litemap v0.8.2
[INFO] [stderr]    Compiling icu_normalizer_data v2.2.0
[INFO] [stderr]    Compiling percent-encoding v2.3.2
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling zerofrom-derive v0.1.7
[INFO] [stderr]    Compiling yoke-derive v0.8.2
[INFO] [stderr]    Compiling zerovec-derive v0.11.3
[INFO] [stderr]    Compiling icu_properties_data v2.2.0
[INFO] [stderr]    Compiling hashbrown v0.17.1
[INFO] [stderr]    Compiling lexical-util v1.0.7
[INFO] [stderr]    Compiling bit-vec v0.9.1
[INFO] [stderr]    Compiling slab v0.4.12
[INFO] [stderr]    Compiling httparse v1.10.1
[INFO] [stderr]    Compiling cfg-if v1.0.4
[INFO] [stderr]    Compiling futures-task v0.3.32
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[INFO] [stderr]    Compiling once_cell v1.21.4
[INFO] [stderr]    Compiling futures-util v0.3.32
[INFO] [stderr]    Compiling sync_wrapper v1.0.2
[INFO] [stderr]    Compiling futures-channel v0.3.32
[INFO] [stderr]    Compiling lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling lexical-parse-integer v1.0.6
[INFO] [stderr]    Compiling tracing-core v0.1.36
[INFO] [stderr]    Compiling tower-layer v0.3.3
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]    Compiling atomic-waker v1.1.2
[INFO] [stderr]    Compiling const-oid v0.10.2
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling http v1.4.0
[INFO] [stderr]    Compiling lexical-parse-float v1.0.6
[INFO] [stderr]    Compiling futures-sink v0.3.32
[INFO] [stderr]    Compiling lexical-write-float v1.0.6
[INFO] [stderr]    Compiling rustix v1.1.4
[INFO] [stderr]    Compiling ryu v1.0.23
[INFO] [stderr]    Compiling ipnet v2.12.0
[INFO] [stderr]    Compiling noodles-core v0.20.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling hybrid-array v0.4.12
[INFO] [stderr]    Compiling tracing v0.1.44
[INFO] [stderr]    Compiling serde_urlencoded v0.7.1
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling lexical-core v1.0.6
[INFO] [stderr]    Compiling linux-raw-sys v0.12.1
[INFO] [stderr]    Compiling libbz2-rs-sys v0.2.4
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling noodles-fastq v0.23.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling zerofrom v0.1.8
[INFO] [stderr]    Compiling socket2 v0.6.3
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[INFO] [stderr]    Compiling anstyle v1.0.14
[INFO] [stderr]    Compiling http-body-util v0.1.3
[INFO] [stderr]    Compiling zerovec v0.11.6
[INFO] [stderr]    Compiling zerotrie v0.2.4
[INFO] [stderr]    Compiling crypto-common v0.1.7
[INFO] [stderr]    Compiling block-buffer v0.10.4
[INFO] [stderr]    Compiling anyhow v1.0.102
[INFO] [stderr]    Compiling bzip2 v0.6.1
[INFO] [stderr]    Compiling digest v0.10.7
[INFO] [stderr]    Compiling tokio v1.52.3
[INFO] [stderr]    Compiling clap_lex v1.1.0
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling block-buffer v0.12.0
[INFO] [stderr]    Compiling crypto-common v0.2.1
[INFO] [stderr]    Compiling sha2 v0.10.9
[INFO] [stderr]    Compiling clap_derive v4.6.1
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling md-5 v0.10.6
[INFO] [stderr]    Compiling tinystr v0.8.3
[INFO] [stderr]    Compiling potential_utf v0.1.5
[INFO] [stderr]    Compiling icu_collections v2.2.0
[INFO] [stderr]    Compiling lzma-rust2 v0.16.2
[INFO] [stderr]    Compiling icu_locale_core v2.2.0
[INFO] [stderr]    Compiling terminal_size v0.4.4
[INFO] [stderr]    Compiling clap_builder v4.6.0
[INFO] [stderr]    Compiling digest v0.11.3
[INFO] [stderr]    Compiling icu_provider v2.2.0
[INFO] [stderr]    Compiling md-5 v0.11.0
[INFO] [stderr]    Compiling icu_normalizer v2.2.0
[INFO] [stderr]    Compiling icu_properties v2.2.0
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling noodles-bgzf v0.47.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling flate2 v1.1.9
[INFO] [stderr]    Compiling noodles-csi v0.56.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling noodles-fasta v0.61.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling clap v4.6.1
[INFO] [stderr]    Compiling noodles-tabix v0.62.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling noodles-sam v0.85.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling noodles-vcf v0.88.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling idna_adapter v1.2.2
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling tower v0.5.3
[INFO] [stderr]    Compiling hyper v1.9.0
[INFO] [stderr]    Compiling tokio-util v0.7.18
[INFO] [stderr]    Compiling url v2.5.8
[INFO] [stderr]    Compiling tower-http v0.6.10
[INFO] [stderr]    Compiling noodles-bam v0.89.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling hyper-util v0.1.20
[INFO] [stderr]    Compiling noodles-bcf v0.86.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling noodles-cram v0.93.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling reqwest v0.13.3
[INFO] [stderr]    Compiling noodles-refget v0.10.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling noodles v0.110.0 (https://github.com/madhavajay/noodles.git?branch=madhava%2Fbioscript#5868f00a)
[INFO] [stderr]    Compiling htslib-rs v0.1.0 (https://github.com/madhavajay/htslib-rs.git?branch=main#03bf5378)
[INFO] [stderr]    Compiling samtools-rs v0.0.1 (/opt/rustwide/workdir/crates/samtools-rs)
[INFO] [stderr]    Compiling samtools-rs-cli v0.0.1 (/opt/rustwide/workdir/crates/samtools-rs-cli)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 23s
[INFO] running `Command { std: "docker" "inspect" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling samtools-rs v0.0.1 (/opt/rustwide/workdir/crates/samtools-rs)
[INFO] [stderr]    Compiling samtools-rs-cli v0.0.1 (/opt/rustwide/workdir/crates/samtools-rs-cli)
[INFO] [stderr] error: could not compile `samtools-rs` (test "misc")
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.98.0-beta.1-x86_64-unknown-linux-gnu/bin/rustc --crate-name misc --edition=2024 crates/samtools-rs/tests/misc.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --forbid=unsafe_code --test --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values())' -C metadata=71ce0cca40d5d2e6 -C extra-filename=-618f4f956f8dfba9 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern anyhow=/opt/rustwide/target/debug/deps/libanyhow-9e4c44ac98d8e4ea.rlib --extern bstr=/opt/rustwide/target/debug/deps/libbstr-07d56dd6a19c3928.rlib --extern bytes=/opt/rustwide/target/debug/deps/libbytes-2ed9460101f17bbf.rlib --extern clap=/opt/rustwide/target/debug/deps/libclap-0afeab3e9e08d442.rlib --extern crc32fast=/opt/rustwide/target/debug/deps/libcrc32fast-77160f4e25d6fc25.rlib --extern flate2=/opt/rustwide/target/debug/deps/libflate2-6086f25bb1160b94.rlib --extern htslib_rs=/opt/rustwide/target/debug/deps/libhtslib_rs-610db4a86bb7892d.rlib --extern indexmap=/opt/rustwide/target/debug/deps/libindexmap-b92bb9c25241b995.rlib --extern md5=/opt/rustwide/target/debug/deps/libmd5-419b5dcd92937ad3.rlib --extern memchr=/opt/rustwide/target/debug/deps/libmemchr-5cfa70d22cb32987.rlib --extern regex=/opt/rustwide/target/debug/deps/libregex-ec2dc9d409c38a88.rlib --extern samtools_rs=/opt/rustwide/target/debug/deps/libsamtools_rs-08b1d2feace3731c.rlib --extern thiserror=/opt/rustwide/target/debug/deps/libthiserror-cc3fa666f0f859a1.rlib --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stderr] error: could not compile `samtools-rs` (lib test)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.98.0-beta.1-x86_64-unknown-linux-gnu/bin/rustc --crate-name samtools_rs --edition=2024 crates/samtools-rs/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --emit=dep-info,link -C embed-bitcode=no -C debuginfo=2 --forbid=unsafe_code --test --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values())' -C metadata=22b871b5d6d57ed5 -C extra-filename=-2301201d1f4c58db --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern anyhow=/opt/rustwide/target/debug/deps/libanyhow-9e4c44ac98d8e4ea.rlib --extern bstr=/opt/rustwide/target/debug/deps/libbstr-07d56dd6a19c3928.rlib --extern bytes=/opt/rustwide/target/debug/deps/libbytes-2ed9460101f17bbf.rlib --extern clap=/opt/rustwide/target/debug/deps/libclap-0afeab3e9e08d442.rlib --extern crc32fast=/opt/rustwide/target/debug/deps/libcrc32fast-77160f4e25d6fc25.rlib --extern flate2=/opt/rustwide/target/debug/deps/libflate2-6086f25bb1160b94.rlib --extern htslib_rs=/opt/rustwide/target/debug/deps/libhtslib_rs-610db4a86bb7892d.rlib --extern indexmap=/opt/rustwide/target/debug/deps/libindexmap-b92bb9c25241b995.rlib --extern md5=/opt/rustwide/target/debug/deps/libmd5-419b5dcd92937ad3.rlib --extern memchr=/opt/rustwide/target/debug/deps/libmemchr-5cfa70d22cb32987.rlib --extern regex=/opt/rustwide/target/debug/deps/libregex-ec2dc9d409c38a88.rlib --extern thiserror=/opt/rustwide/target/debug/deps/libthiserror-cc3fa666f0f859a1.rlib --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/opt/rustwide/target/debug/deps/rustcjFlVm2/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libsamtools_rs-08b1d2feace3731c,libcrc32fast-77160f4e25d6fc25,libthiserror-cc3fa666f0f859a1,libmd5-419b5dcd92937ad3,libhtslib_rs-610db4a86bb7892d,libregex-ec2dc9d409c38a88,libregex_automata-bf751438404198b1,libaho_corasick-fa94425a423a79cf,libregex_syntax-6d6ee545e2ffad72,libnoodles-447293b353542b33,libnoodles_refget-d3564ce9e81a71c3,libreqwest-133648448c788875,libserde_urlencoded-2341f3c8e7e61253,libryu-1f4f40e4352371e5,libserde_json-508bd9f2e6d37d72,libzmij-ef63f1da73704b4c,libtower_http-229fbf5c03987a7a,libtower-aba178436e3984b9,libtower_layer-d908dd771b239ecd,libhyper_util-46e5b33ba6492273,libbase64-32787b0325ea6df8,libipnet-61ca7a5e1c2863d4,libtower_service-3fb88d28c2218805,libtracing-8891879938231fdd,libtracing_core-89b602bc4a7d7f8a,libonce_cell-b5bdc597ed9676b3,libhyper-33ba21f8c7dc45f1,libwant-7a6260b9c50f1479,libtry_lock-8fa2f6971035be84,libhttparse-8c9b827b8f345444,libatomic_waker-06950c8c08d2b8fa,libfutures_channel-94289a78f74303ed,libfutures_util-155a98708b78fd0a,libfutures_task-5326a9841e0a3cd0,libtokio_util-264e44886bd3b8ff,libfutures_sink-3971bde37bb30e19,libtokio-c12196dceb2b8d21,libsocket2-2367bcf2eb96355a,libmio-3f5f6fa89ecad527,liblibc-612664c2206eec43,libhttp_body_util-ed5fbd1db1f6d6fc,libpin_project_lite-0a15d51c77964692,libhttp_body-8d8f9f8398f09fa7,liblog-f16ce4b64309590f,libhttp-563f2cb150350555,libitoa-5de11b3b23bfe572,libsync_wrapper-6bdfbc29c4269203,libfutures_core-1121ff913ed87f93,libserde-412dbd78e31c62e4,libserde_core-2c928ee17a7447a4,liburl-f151a1b8d7ac10cc,libidna-d10aa9b5f6a0dca8,libidna_adapter-0143082c932ce651,libicu_properties-f6d23f1c7dd2c423,libicu_properties_data-e6cf238fc98dd59d,libicu_normalizer-740a8606bb2e85fd,libsmallvec-bc3128fdd57228fc,libicu_normalizer_data-8fea05bee0bb4e49,libicu_collections-323d7649c55d2bdf,libutf8_iter-51566bbad89f3a68,libpotential_utf-a1212c0291c510fe,libicu_provider-f0257ff03c4d66a5,libicu_locale_core-d126436c9da29667,libtinystr-1b5dab3b93a374c9,liblitemap-dc288f07f8f61193,libwriteable-48b3e52227924bb5,libzerovec-c48ce656957872ab,libzerotrie-2f04072257e534e3,libyoke-a6a95c9f09e13f77,libstable_deref_trait-63cbf3f3d3f94e56,libzerofrom-6dca3e26d145fb42,libform_urlencoded-58b0f0edb59b40d2,libnoodles_fastq-46ed6cddb13d68c4,libnoodles_cram-30ff2717d70b4336,libmd5-3befc2beb0ef4db7,libdigest-481d11c3e5005a7e,libconst_oid-58507ca40e062d76,libcrypto_common-6571a6bf29698fcc,libblock_buffer-6dc2dbbe97810cbc,libhybrid_array-4cf5b5ac0b92d91d,libnoodles_fasta-89099ee26a9f86de,liblzma_rust2-b6997db8fec1b048,libsha2-6b7f2af15756a75b,libcpufeatures-e04321643d03190d,libcfg_if-83060ec5685761ae,libdigest-6e373fc121e8a853,libblock_buffer-381c14b1d561e854,libcrypto_common-b95f3716e504c74a,libgeneric_array-e19a48ecdef08923,libtypenum-16ceaa0b6a024548,libbzip2-19a7453f9dacfeec,liblibbz2_rs_sys-bd804546ef7ac93c,libnoodles_bcf-a3a762d9d846f8f4,libnoodles_vcf-5378b4422356ccb1,libpercent_encoding-fa055ecaa1e57cfa,libnoodles_tabix-ccea1c2c35b302e4,libnoodles_bam-b6e735449b621bbd,libnoodles_sam-cdb6bffbb59af747,libbitflags-db7b9c0337a7ee76,liblexical_core-01af1141c816a22c,liblexical_write_float-c10b4e2ad2c9e604,liblexical_write_integer-2b5a1c3222d346aa,liblexical_parse_float-a7ce5b1bad958c68,liblexical_parse_integer-eccd82888d3f7b6c,liblexical_util-cb790f3155cc1e98,libnoodles_csi-8c03b32a97f6352d,libbit_vec-6abea4b3914df053,libnoodles_core-254acba3b58a32df,libnoodles_bgzf-90693835a3f3e168,libbytes-2ed9460101f17bbf,libcrossbeam_channel-a54b30448774328c,libcrossbeam_utils-076f45bf81d9c2d2,libindexmap-b92bb9c25241b995,libequivalent-6a754676e6af62ae,libhashbrown-d7214d631586fd51,libflate2-6086f25bb1160b94,libzlib_rs-b5fdf3d8136cdeac,libbstr-07d56dd6a19c3928,libmemchr-5cfa70d22cb32987}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/deps/rustcjFlVm2/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/targetcut-c70d69f63e271ef0" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `samtools-rs` (test "targetcut") due to 1 previous error
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/opt/rustwide/target/debug/deps/rustcRUxRFQ/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libsamtools_rs-08b1d2feace3731c,libcrc32fast-77160f4e25d6fc25,libthiserror-cc3fa666f0f859a1,libmd5-419b5dcd92937ad3,libhtslib_rs-610db4a86bb7892d,libregex-ec2dc9d409c38a88,libregex_automata-bf751438404198b1,libaho_corasick-fa94425a423a79cf,libregex_syntax-6d6ee545e2ffad72,libnoodles-447293b353542b33,libnoodles_refget-d3564ce9e81a71c3,libreqwest-133648448c788875,libserde_urlencoded-2341f3c8e7e61253,libryu-1f4f40e4352371e5,libserde_json-508bd9f2e6d37d72,libzmij-ef63f1da73704b4c,libtower_http-229fbf5c03987a7a,libtower-aba178436e3984b9,libtower_layer-d908dd771b239ecd,libhyper_util-46e5b33ba6492273,libbase64-32787b0325ea6df8,libipnet-61ca7a5e1c2863d4,libtower_service-3fb88d28c2218805,libtracing-8891879938231fdd,libtracing_core-89b602bc4a7d7f8a,libonce_cell-b5bdc597ed9676b3,libhyper-33ba21f8c7dc45f1,libwant-7a6260b9c50f1479,libtry_lock-8fa2f6971035be84,libhttparse-8c9b827b8f345444,libatomic_waker-06950c8c08d2b8fa,libfutures_channel-94289a78f74303ed,libfutures_util-155a98708b78fd0a,libfutures_task-5326a9841e0a3cd0,libtokio_util-264e44886bd3b8ff,libfutures_sink-3971bde37bb30e19,libtokio-c12196dceb2b8d21,libsocket2-2367bcf2eb96355a,libmio-3f5f6fa89ecad527,liblibc-612664c2206eec43,libhttp_body_util-ed5fbd1db1f6d6fc,libpin_project_lite-0a15d51c77964692,libhttp_body-8d8f9f8398f09fa7,liblog-f16ce4b64309590f,libhttp-563f2cb150350555,libitoa-5de11b3b23bfe572,libsync_wrapper-6bdfbc29c4269203,libfutures_core-1121ff913ed87f93,libserde-412dbd78e31c62e4,libserde_core-2c928ee17a7447a4,liburl-f151a1b8d7ac10cc,libidna-d10aa9b5f6a0dca8,libidna_adapter-0143082c932ce651,libicu_properties-f6d23f1c7dd2c423,libicu_properties_data-e6cf238fc98dd59d,libicu_normalizer-740a8606bb2e85fd,libsmallvec-bc3128fdd57228fc,libicu_normalizer_data-8fea05bee0bb4e49,libicu_collections-323d7649c55d2bdf,libutf8_iter-51566bbad89f3a68,libpotential_utf-a1212c0291c510fe,libicu_provider-f0257ff03c4d66a5,libicu_locale_core-d126436c9da29667,libtinystr-1b5dab3b93a374c9,liblitemap-dc288f07f8f61193,libwriteable-48b3e52227924bb5,libzerovec-c48ce656957872ab,libzerotrie-2f04072257e534e3,libyoke-a6a95c9f09e13f77,libstable_deref_trait-63cbf3f3d3f94e56,libzerofrom-6dca3e26d145fb42,libform_urlencoded-58b0f0edb59b40d2,libnoodles_fastq-46ed6cddb13d68c4,libnoodles_cram-30ff2717d70b4336,libmd5-3befc2beb0ef4db7,libdigest-481d11c3e5005a7e,libconst_oid-58507ca40e062d76,libcrypto_common-6571a6bf29698fcc,libblock_buffer-6dc2dbbe97810cbc,libhybrid_array-4cf5b5ac0b92d91d,libnoodles_fasta-89099ee26a9f86de,liblzma_rust2-b6997db8fec1b048,libsha2-6b7f2af15756a75b,libcpufeatures-e04321643d03190d,libcfg_if-83060ec5685761ae,libdigest-6e373fc121e8a853,libblock_buffer-381c14b1d561e854,libcrypto_common-b95f3716e504c74a,libgeneric_array-e19a48ecdef08923,libtypenum-16ceaa0b6a024548,libbzip2-19a7453f9dacfeec,liblibbz2_rs_sys-bd804546ef7ac93c,libnoodles_bcf-a3a762d9d846f8f4,libnoodles_vcf-5378b4422356ccb1,libpercent_encoding-fa055ecaa1e57cfa,libnoodles_tabix-ccea1c2c35b302e4,libnoodles_bam-b6e735449b621bbd,libnoodles_sam-cdb6bffbb59af747,libbitflags-db7b9c0337a7ee76,liblexical_core-01af1141c816a22c,liblexical_write_float-c10b4e2ad2c9e604,liblexical_write_integer-2b5a1c3222d346aa,liblexical_parse_float-a7ce5b1bad958c68,liblexical_parse_integer-eccd82888d3f7b6c,liblexical_util-cb790f3155cc1e98,libnoodles_csi-8c03b32a97f6352d,libbit_vec-6abea4b3914df053,libnoodles_core-254acba3b58a32df,libnoodles_bgzf-90693835a3f3e168,libbytes-2ed9460101f17bbf,libcrossbeam_channel-a54b30448774328c,libcrossbeam_utils-076f45bf81d9c2d2,libindexmap-b92bb9c25241b995,libequivalent-6a754676e6af62ae,libhashbrown-d7214d631586fd51,libflate2-6086f25bb1160b94,libzlib_rs-b5fdf3d8136cdeac,libbstr-07d56dd6a19c3928,libmemchr-5cfa70d22cb32987}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/deps/rustcRUxRFQ/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/phase-aaa17ca9379a417c" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `samtools-rs` (test "phase") due to 1 previous error
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note:  "cc" "-m64" "/opt/rustwide/target/debug/deps/rustcJNKyoU/symbols.o" "<7 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libsamtools_rs-08b1d2feace3731c,libcrc32fast-77160f4e25d6fc25,libthiserror-cc3fa666f0f859a1,libmd5-419b5dcd92937ad3,libhtslib_rs-610db4a86bb7892d,libregex-ec2dc9d409c38a88,libregex_automata-bf751438404198b1,libaho_corasick-fa94425a423a79cf,libregex_syntax-6d6ee545e2ffad72,libnoodles-447293b353542b33,libnoodles_refget-d3564ce9e81a71c3,libreqwest-133648448c788875,libserde_urlencoded-2341f3c8e7e61253,libryu-1f4f40e4352371e5,libserde_json-508bd9f2e6d37d72,libzmij-ef63f1da73704b4c,libtower_http-229fbf5c03987a7a,libtower-aba178436e3984b9,libtower_layer-d908dd771b239ecd,libhyper_util-46e5b33ba6492273,libbase64-32787b0325ea6df8,libipnet-61ca7a5e1c2863d4,libtower_service-3fb88d28c2218805,libtracing-8891879938231fdd,libtracing_core-89b602bc4a7d7f8a,libonce_cell-b5bdc597ed9676b3,libhyper-33ba21f8c7dc45f1,libwant-7a6260b9c50f1479,libtry_lock-8fa2f6971035be84,libhttparse-8c9b827b8f345444,libatomic_waker-06950c8c08d2b8fa,libfutures_channel-94289a78f74303ed,libfutures_util-155a98708b78fd0a,libfutures_task-5326a9841e0a3cd0,libtokio_util-264e44886bd3b8ff,libfutures_sink-3971bde37bb30e19,libtokio-c12196dceb2b8d21,libsocket2-2367bcf2eb96355a,libmio-3f5f6fa89ecad527,liblibc-612664c2206eec43,libhttp_body_util-ed5fbd1db1f6d6fc,libpin_project_lite-0a15d51c77964692,libhttp_body-8d8f9f8398f09fa7,liblog-f16ce4b64309590f,libhttp-563f2cb150350555,libitoa-5de11b3b23bfe572,libsync_wrapper-6bdfbc29c4269203,libfutures_core-1121ff913ed87f93,libserde-412dbd78e31c62e4,libserde_core-2c928ee17a7447a4,liburl-f151a1b8d7ac10cc,libidna-d10aa9b5f6a0dca8,libidna_adapter-0143082c932ce651,libicu_properties-f6d23f1c7dd2c423,libicu_properties_data-e6cf238fc98dd59d,libicu_normalizer-740a8606bb2e85fd,libsmallvec-bc3128fdd57228fc,libicu_normalizer_data-8fea05bee0bb4e49,libicu_collections-323d7649c55d2bdf,libutf8_iter-51566bbad89f3a68,libpotential_utf-a1212c0291c510fe,libicu_provider-f0257ff03c4d66a5,libicu_locale_core-d126436c9da29667,libtinystr-1b5dab3b93a374c9,liblitemap-dc288f07f8f61193,libwriteable-48b3e52227924bb5,libzerovec-c48ce656957872ab,libzerotrie-2f04072257e534e3,libyoke-a6a95c9f09e13f77,libstable_deref_trait-63cbf3f3d3f94e56,libzerofrom-6dca3e26d145fb42,libform_urlencoded-58b0f0edb59b40d2,libnoodles_fastq-46ed6cddb13d68c4,libnoodles_cram-30ff2717d70b4336,libmd5-3befc2beb0ef4db7,libdigest-481d11c3e5005a7e,libconst_oid-58507ca40e062d76,libcrypto_common-6571a6bf29698fcc,libblock_buffer-6dc2dbbe97810cbc,libhybrid_array-4cf5b5ac0b92d91d,libnoodles_fasta-89099ee26a9f86de,liblzma_rust2-b6997db8fec1b048,libsha2-6b7f2af15756a75b,libcpufeatures-e04321643d03190d,libcfg_if-83060ec5685761ae,libdigest-6e373fc121e8a853,libblock_buffer-381c14b1d561e854,libcrypto_common-b95f3716e504c74a,libgeneric_array-e19a48ecdef08923,libtypenum-16ceaa0b6a024548,libbzip2-19a7453f9dacfeec,liblibbz2_rs_sys-bd804546ef7ac93c,libnoodles_bcf-a3a762d9d846f8f4,libnoodles_vcf-5378b4422356ccb1,libpercent_encoding-fa055ecaa1e57cfa,libnoodles_tabix-ccea1c2c35b302e4,libnoodles_bam-b6e735449b621bbd,libnoodles_sam-cdb6bffbb59af747,libbitflags-db7b9c0337a7ee76,liblexical_core-01af1141c816a22c,liblexical_write_float-c10b4e2ad2c9e604,liblexical_write_integer-2b5a1c3222d346aa,liblexical_parse_float-a7ce5b1bad958c68,liblexical_parse_integer-eccd82888d3f7b6c,liblexical_util-cb790f3155cc1e98,libnoodles_csi-8c03b32a97f6352d,libbit_vec-6abea4b3914df053,libnoodles_core-254acba3b58a32df,libnoodles_bgzf-90693835a3f3e168,libbytes-2ed9460101f17bbf,libcrossbeam_channel-a54b30448774328c,libcrossbeam_utils-076f45bf81d9c2d2,libindexmap-b92bb9c25241b995,libequivalent-6a754676e6af62ae,libhashbrown-d7214d631586fd51,libflate2-6086f25bb1160b94,libzlib_rs-b5fdf3d8136cdeac,libbstr-07d56dd6a19c3928,libmemchr-5cfa70d22cb32987}.rlib" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,libcfg_if-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,liblibc-*,librustc_std_workspace_core-*,liballoc-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-L" "/opt/rustwide/target/debug/deps/rustcJNKyoU/raw-dylibs" "-B<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/bin/gcc-ld" "-fuse-ld=lld" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "<sysroot>/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/sort_merge-1e29bb1c0f896d37" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: collect2: fatal error: ld terminated with signal 9 [Killed]
[INFO] [stdout]           compilation terminated.
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `samtools-rs` (test "sort_merge") due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3", kill_on_drop: false }`
[INFO] [stdout] d77cf8e6db189b9c3b12e815762da40c5ab7cc5c5592e78a9edd42b4e9ae87d3
