[INFO] cloning repository https://github.com/HuangShiLab/meta2bseek [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HuangShiLab/meta2bseek" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] a0baa2aaabe170d698a3509f573c62e5635afdc0 [INFO] testing HuangShiLab/meta2bseek against 1.97.0-beta.6 for beta-1.98-2 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/HuangShiLab/meta2bseek [INFO] finished tweaking git repo https://github.com/HuangShiLab/meta2bseek [INFO] tweaked toml for git repo https://github.com/HuangShiLab/meta2bseek written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/HuangShiLab/meta2bseek on toolchain 1.97.0-beta.6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/HuangShiLab/meta2bseek already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded tikv-jemallocator v0.5.4 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded scalable_cuckoo_filter v0.2.4 [INFO] [stderr] Downloaded siphasher v1.0.2 [INFO] [stderr] Downloaded memory-stats v1.2.0 [INFO] [stderr] Downloaded nalgebra-macros v0.1.0 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded ntapi v0.4.3 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded safe_arch v0.7.4 [INFO] [stderr] Downloaded wide v0.7.33 [INFO] [stderr] Downloaded sysinfo v0.29.11 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded petgraph v0.6.5 [INFO] [stderr] Downloaded tikv-jemalloc-sys v0.5.4+5.3.0-patched [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c [INFO] running `Command { std: "docker" "start" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.16 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling cc v1.2.59 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling bytemuck v1.25.0 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling regex-syntax v0.8.10 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling anstyle-parse v1.0.0 [INFO] [stderr] Compiling time-core v0.1.8 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.2 [INFO] [stderr] Compiling num-conv v0.2.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling anstyle-query v1.1.5 [INFO] [stderr] Compiling anstyle v1.0.14 [INFO] [stderr] Compiling colorchoice v1.0.5 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling simd-adler32 v0.3.9 [INFO] [stderr] Compiling anstream v1.0.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling time-macros v0.2.27 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling deranged v0.5.8 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling clap_lex v1.1.0 [INFO] [stderr] Compiling strsim v0.11.1 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling clap_builder v4.6.0 [INFO] [stderr] Compiling flate2 v1.1.9 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling tikv-jemalloc-sys v0.5.4+5.3.0-patched [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling time v0.3.47 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling buffer-redux v1.1.0 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling unsafe-libyaml v0.2.11 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling siphasher v1.0.2 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling sysinfo v0.29.11 [INFO] [stderr] Compiling scalable_cuckoo_filter v0.2.4 [INFO] [stderr] Compiling serde_json v1.0.149 [INFO] [stderr] Compiling memory-stats v1.2.0 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling clap_derive v4.6.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling clap v4.6.0 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling serde_yaml v0.9.34+deprecated [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling tikv-jemallocator v0.5.4 [INFO] [stderr] Compiling meta2bseek v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:480:5 [INFO] [stdout] | [INFO] [stdout] 480 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 176 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:993:4 [INFO] [stdout] | [INFO] [stdout] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1203:4 [INFO] [stdout] | [INFO] [stdout] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:480:5 [INFO] [stdout] | [INFO] [stdout] 480 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `QueryArgs` is never constructed [INFO] [stdout] --> src/cmdline.rs:299:12 [INFO] [stdout] | [INFO] [stdout] 299 | pub struct QueryArgs { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stdout] --> src/extract.rs:397:12 [INFO] [stdout] | [INFO] [stdout] 397 | pub struct GenomeSketchInspect { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DatabaseSketch` is never constructed [INFO] [stdout] --> src/extract.rs:416:12 [INFO] [stdout] | [INFO] [stdout] 416 | pub struct DatabaseSketch { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type alias `Hash` is never used [INFO] [stdout] --> src/sketch.rs:20:10 [INFO] [stdout] | [INFO] [stdout] 20 | pub type Hash = u64; [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `query_tags` is never read [INFO] [stdout] --> src/contain.rs:116:9 [INFO] [stdout] | [INFO] [stdout] 101 | pub struct QueryResult { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 116 | pub query_tags: usize, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `QueryResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `file_path` is never read [INFO] [stdout] --> src/contain.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 123 | pub struct GenomeProfileResult { [INFO] [stdout] | ------------------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 176 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `query_single_file` is never used [INFO] [stdout] --> src/contain.rs:927:8 [INFO] [stdout] | [INFO] [stdout] 927 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:993:4 [INFO] [stdout] | [INFO] [stdout] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1203:4 [INFO] [stdout] | [INFO] [stdout] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `DEFAULT_FPR` is never used [INFO] [stdout] --> src/constants.rs:18:11 [INFO] [stdout] | [INFO] [stdout] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hash_string` is never used [INFO] [stdout] --> src/constants.rs:25:8 [INFO] [stdout] | [INFO] [stdout] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 03s [INFO] running `Command { std: "docker" "inspect" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling meta2bseek v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:480:5 [INFO] [stdout] | [INFO] [stdout] 480 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 176 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:993:4 [INFO] [stdout] | [INFO] [stdout] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1203:4 [INFO] [stdout] | [INFO] [stdout] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:480:5 [INFO] [stdout] | [INFO] [stdout] 480 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 176 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:993:4 [INFO] [stdout] | [INFO] [stdout] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1203:4 [INFO] [stdout] | [INFO] [stdout] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:480:5 [INFO] [stdout] | [INFO] [stdout] 480 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `QueryArgs` is never constructed [INFO] [stdout] --> src/cmdline.rs:299:12 [INFO] [stdout] | [INFO] [stdout] 299 | pub struct QueryArgs { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stdout] --> src/extract.rs:397:12 [INFO] [stdout] | [INFO] [stdout] 397 | pub struct GenomeSketchInspect { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DatabaseSketch` is never constructed [INFO] [stdout] --> src/extract.rs:416:12 [INFO] [stdout] | [INFO] [stdout] 416 | pub struct DatabaseSketch { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type alias `Hash` is never used [INFO] [stdout] --> src/sketch.rs:20:10 [INFO] [stdout] | [INFO] [stdout] 20 | pub type Hash = u64; [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `query_tags` is never read [INFO] [stdout] --> src/contain.rs:116:9 [INFO] [stdout] | [INFO] [stdout] 101 | pub struct QueryResult { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 116 | pub query_tags: usize, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `QueryResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `file_path` is never read [INFO] [stdout] --> src/contain.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 123 | pub struct GenomeProfileResult { [INFO] [stdout] | ------------------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 176 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `query_single_file` is never used [INFO] [stdout] --> src/contain.rs:927:8 [INFO] [stdout] | [INFO] [stdout] 927 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:993:4 [INFO] [stdout] | [INFO] [stdout] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1203:4 [INFO] [stdout] | [INFO] [stdout] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `DEFAULT_FPR` is never used [INFO] [stdout] --> src/constants.rs:18:11 [INFO] [stdout] | [INFO] [stdout] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hash_string` is never used [INFO] [stdout] --> src/constants.rs:25:8 [INFO] [stdout] | [INFO] [stdout] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.63s [INFO] running `Command { std: "docker" "inspect" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::thread` [INFO] [stderr] --> src/contain.rs:13:5 [INFO] [stderr] | [INFO] [stderr] 13 | use std::thread; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::time::Duration` [INFO] [stderr] --> src/contain.rs:14:5 [INFO] [stderr] | [INFO] [stderr] 14 | use std::time::Duration; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `memory_stats::memory_stats` [INFO] [stderr] --> src/contain.rs:15:5 [INFO] [stderr] | [INFO] [stderr] 15 | use memory_stats::memory_stats; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `sample_entries` [INFO] [stderr] --> src/contain.rs:480:5 [INFO] [stderr] | [INFO] [stderr] 480 | sample_entries: &[SylspEntry] [INFO] [stderr] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: struct `ReassignmentStats` is never constructed [INFO] [stderr] --> src/contain.rs:176:8 [INFO] [stderr] | [INFO] [stderr] 176 | struct ReassignmentStats { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: function `extract_genome_id` is never used [INFO] [stderr] --> src/contain.rs:993:4 [INFO] [stderr] | [INFO] [stderr] 993 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `read_genome_mapping` is never used [INFO] [stderr] --> src/contain.rs:1203:4 [INFO] [stderr] | [INFO] [stderr] 1203 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `meta2bseek` (lib) generated 7 warnings (run `cargo fix --lib -p meta2bseek` to apply 4 suggestions) [INFO] [stderr] warning: `meta2bseek` (lib test) generated 7 warnings (7 duplicates) [INFO] [stderr] warning: struct `QueryArgs` is never constructed [INFO] [stderr] --> src/cmdline.rs:299:12 [INFO] [stderr] | [INFO] [stderr] 299 | pub struct QueryArgs { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stderr] --> src/extract.rs:397:12 [INFO] [stderr] | [INFO] [stderr] 397 | pub struct GenomeSketchInspect { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: struct `DatabaseSketch` is never constructed [INFO] [stderr] --> src/extract.rs:416:12 [INFO] [stderr] | [INFO] [stderr] 416 | pub struct DatabaseSketch { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: type alias `Hash` is never used [INFO] [stderr] --> src/sketch.rs:20:10 [INFO] [stderr] | [INFO] [stderr] 20 | pub type Hash = u64; [INFO] [stderr] | ^^^^ [INFO] [stderr] [INFO] [stderr] warning: field `query_tags` is never read [INFO] [stderr] --> src/contain.rs:116:9 [INFO] [stderr] | [INFO] [stderr] 101 | pub struct QueryResult { [INFO] [stderr] | ----------- field in this struct [INFO] [stderr] ... [INFO] [stderr] 116 | pub query_tags: usize, [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `QueryResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: field `file_path` is never read [INFO] [stderr] --> src/contain.rs:126:9 [INFO] [stderr] | [INFO] [stderr] 123 | pub struct GenomeProfileResult { [INFO] [stderr] | ------------------- field in this struct [INFO] [stderr] ... [INFO] [stderr] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: struct `ReassignmentStats` is never constructed [INFO] [stderr] --> src/contain.rs:176:8 [INFO] [stderr] | [INFO] [stderr] 176 | struct ReassignmentStats { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `query_single_file` is never used [INFO] [stderr] --> src/contain.rs:927:8 [INFO] [stderr] | [INFO] [stderr] 927 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `DEFAULT_FPR` is never used [INFO] [stderr] --> src/constants.rs:18:11 [INFO] [stderr] | [INFO] [stderr] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `hash_string` is never used [INFO] [stderr] --> src/constants.rs:25:8 [INFO] [stderr] | [INFO] [stderr] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `meta2bseek` (bin "meta2bseek" test) generated 16 warnings (6 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.19s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/meta2bseek-92b51d9cf295cb44) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/meta2bseek-c48ad918b6a6e2b4) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test mark::tests::test_mark_unique_tags ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests meta2bseek [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c", kill_on_drop: false }` [INFO] [stdout] b5d38e0a7f616da5298cf332af1b58db7ca6a5fc3e6d894757d4c9eeacc6945c