[INFO] cloning repository https://github.com/keithyin/align-hmm
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/keithyin/align-hmm" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Falign-hmm", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Falign-hmm'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] a0fa9a7347a7f5964fcaa64b15654e3602cbeab4
[INFO] testing keithyin/align-hmm against 1.98.0-beta.1 for beta-1.98-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkeithyin%2Falign-hmm" "/workspace/builds/worker-1-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/keithyin/align-hmm
[INFO] finished tweaking git repo https://github.com/keithyin/align-hmm
[INFO] tweaked toml for git repo https://github.com/keithyin/align-hmm written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/keithyin/align-hmm on toolchain 1.98.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/keithyin/align-hmm already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
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[INFO] [stdout] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stdout]  --> src/em_training/fb.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 4 |     common::IDX_BASE_MAP,
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `decode_2_bases`
[INFO] [stdout]  --> src/em_training/fb.rs:8:20
[INFO] [stdout]   |
[INFO] [stdout] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stdout]   |                    ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stdout]  --> src/em_training/fb_v2.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 4 |     common::IDX_BASE_MAP,
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `decode_2_bases`
[INFO] [stdout]  --> src/em_training/fb_v2.rs:8:20
[INFO] [stdout]   |
[INFO] [stdout] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stdout]   |                    ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fb::veterbi_decode`
[INFO] [stdout]   --> src/em_training.rs:17:5
[INFO] [stdout]    |
[INFO] [stdout] 17 | use fb::veterbi_decode;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around method argument
[INFO] [stdout]    --> src/em_training.rs:273:9
[INFO] [stdout]     |
[INFO] [stdout] 273 |         (alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stdout]     |         ^
[INFO] [stdout] ...
[INFO] [stdout] 279 |             )),
[INFO] [stdout]     |              ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 273 ~         alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stdout] 274 |             + beta_dp[[tot_row - 1, tot_col - 1]]
[INFO] [stdout] ...
[INFO] [stdout] 278 |                 cur_base_enc,
[INFO] [stdout] 279 ~             ),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `Array` and `stack`
[INFO] [stdout]  --> src/hmm_model.rs:2:18
[INFO] [stdout]   |
[INFO] [stdout] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stdout]   |                  ^^^^^  ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `boundaries_4_100` and `v1`
[INFO] [stdout]   --> src/main.rs:16:18
[INFO] [stdout]    |
[INFO] [stdout] 16 | use hmm_models::{boundaries_4_100, v1};
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^^  ^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Dimension`
[INFO] [stdout]  --> src/hmm_model.rs:2:62
[INFO] [stdout]   |
[INFO] [stdout] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stdout]   |                                                              ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `ref_base`
[INFO] [stdout]    --> src/supervised_training.rs:391:25
[INFO] [stdout]     |
[INFO] [stdout] 391 |                     let ref_base = ref_base as u8;
[INFO] [stdout]     |                         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ref_base`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `cnt` is assigned to, but never used
[INFO] [stdout]   --> src/dataset.rs:65:9
[INFO] [stdout]    |
[INFO] [stdout] 65 |     let mut cnt = 0;
[INFO] [stdout]    |         ^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_cnt` instead
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `cnt` is never read
[INFO] [stdout]   --> src/dataset.rs:68:9
[INFO] [stdout]    |
[INFO] [stdout] 68 |         cnt += 1;
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `forward` is never used
[INFO] [stdout]   --> src/em_training/fb.rs:21:8
[INFO] [stdout]    |
[INFO] [stdout] 21 | pub fn forward(encoded_query: &[u8], template: &Template, hmm_model: &HmmModel) -> Array2<f64> {
[INFO] [stdout]    |        ^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `forward_with_log_sum_exp_trick` is never used
[INFO] [stdout]    --> src/em_training/fb.rs:106:8
[INFO] [stdout]     |
[INFO] [stdout] 106 | pub fn forward_with_log_sum_exp_trick(
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `backward` is never used
[INFO] [stdout]    --> src/em_training/fb.rs:195:8
[INFO] [stdout]     |
[INFO] [stdout] 195 | pub fn backward(encoded_query: &[u8], template: &Template, hmm_model: &HmmModel) -> Array2<f64> {
[INFO] [stdout]     |        ^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `backward_with_log_sum_exp_trick` is never used
[INFO] [stdout]    --> src/em_training/fb.rs:289:8
[INFO] [stdout]     |
[INFO] [stdout] 289 | pub fn backward_with_log_sum_exp_trick(
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `encode_emit_base` is never used
[INFO] [stdout]   --> src/em_training/model.rs:26:8
[INFO] [stdout]    |
[INFO] [stdout] 26 | pub fn encode_emit_base(dw_bucket: u8, base: u8) -> u8 {
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated items `new`, `add_to_ctx_move_prob_numerator`, `add_to_move_ctx_emit_prob_numerator`, and `merge` are never used
[INFO] [stdout]    --> src/hmm_model.rs:310:12
[INFO] [stdout]     |
[INFO] [stdout] 309 | impl HmmBuilder {
[INFO] [stdout]     | --------------- associated items in this implementation
[INFO] [stdout] 310 |     pub fn new() -> Self {
[INFO] [stdout]     |            ^^^
[INFO] [stdout] ...
[INFO] [stdout] 317 |     pub fn add_to_ctx_move_prob_numerator(&mut self, ctx: u8, movement: TransState, prob: f64) {
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 321 |     pub fn add_to_move_ctx_emit_prob_numerator(
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 332 |     pub fn merge(&mut self, other: &HmmBuilder) {
[INFO] [stdout]     |            ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `get_hmm_model` is never used
[INFO] [stdout]  --> src/hmm_models/v1.rs:6:8
[INFO] [stdout]   |
[INFO] [stdout] 6 | pub fn get_hmm_model() -> HmmModel {
[INFO] [stdout]   |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `get_hmm_model` is never used
[INFO] [stdout]  --> src/hmm_models/v2.rs:5:8
[INFO] [stdout]   |
[INFO] [stdout] 5 | pub fn get_hmm_model() -> HmmModel {
[INFO] [stdout]   |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `get_hmm_model` is never used
[INFO] [stdout]  --> src/hmm_models/boundaries_4_100.rs:5:8
[INFO] [stdout]   |
[INFO] [stdout] 5 | pub fn get_hmm_model() -> HmmModel {
[INFO] [stdout]   |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 8m 22s
[INFO] running `Command { std: "docker" "inspect" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling align-hmm v0.0.2 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stdout]  --> src/em_training/fb.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 4 |     common::IDX_BASE_MAP,
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `decode_2_bases`
[INFO] [stdout]  --> src/em_training/fb.rs:8:20
[INFO] [stdout]   |
[INFO] [stdout] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stdout]   |                    ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stdout]  --> src/em_training/fb_v2.rs:4:5
[INFO] [stdout]   |
[INFO] [stdout] 4 |     common::IDX_BASE_MAP,
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `decode_2_bases`
[INFO] [stdout]  --> src/em_training/fb_v2.rs:8:20
[INFO] [stdout]   |
[INFO] [stdout] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stdout]   |                    ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `gskits::file_reader::bed_reader::BedRowData`
[INFO] [stdout]    --> src/em_training/fb_v2.rs:228:9
[INFO] [stdout]     |
[INFO] [stdout] 228 |     use gskits::file_reader::bed_reader::BedRowData;
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `fb::veterbi_decode`
[INFO] [stdout]   --> src/em_training.rs:17:5
[INFO] [stdout]    |
[INFO] [stdout] 17 | use fb::veterbi_decode;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around method argument
[INFO] [stdout]    --> src/em_training.rs:273:9
[INFO] [stdout]     |
[INFO] [stdout] 273 |         (alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stdout]     |         ^
[INFO] [stdout] ...
[INFO] [stdout] 279 |             )),
[INFO] [stdout]     |              ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 273 ~         alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stdout] 274 |             + beta_dp[[tot_row - 1, tot_col - 1]]
[INFO] [stdout] ...
[INFO] [stdout] 278 |                 cur_base_enc,
[INFO] [stdout] 279 ~             ),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `Array` and `stack`
[INFO] [stdout]  --> src/hmm_model.rs:2:18
[INFO] [stdout]   |
[INFO] [stdout] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stdout]   |                  ^^^^^  ^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `boundaries_4_100` and `v1`
[INFO] [stdout]   --> src/main.rs:16:18
[INFO] [stdout]    |
[INFO] [stdout] 16 | use hmm_models::{boundaries_4_100, v1};
[INFO] [stdout]    |                  ^^^^^^^^^^^^^^^^  ^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Dimension`
[INFO] [stdout]  --> src/hmm_model.rs:2:62
[INFO] [stdout]   |
[INFO] [stdout] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stdout]   |                                                              ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `idx`
[INFO] [stdout]    --> src/em_training.rs:302:17
[INFO] [stdout]     |
[INFO] [stdout] 302 |             for idx in 0..100 {
[INFO] [stdout]     |                 ^^^ help: if this is intentional, prefix it with an underscore: `_idx`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `ref_base`
[INFO] [stdout]    --> src/supervised_training.rs:391:25
[INFO] [stdout]     |
[INFO] [stdout] 391 |                     let ref_base = ref_base as u8;
[INFO] [stdout]     |                         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ref_base`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable `cnt` is assigned to, but never used
[INFO] [stdout]   --> src/dataset.rs:65:9
[INFO] [stdout]    |
[INFO] [stdout] 65 |     let mut cnt = 0;
[INFO] [stdout]    |         ^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: consider using `_cnt` instead
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: value assigned to `cnt` is never read
[INFO] [stdout]   --> src/dataset.rs:68:9
[INFO] [stdout]    |
[INFO] [stdout] 68 |         cnt += 1;
[INFO] [stdout]    |         ^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = help: maybe it is overwritten before being read?
[INFO] [stdout]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `encode_emit_base` is never used
[INFO] [stdout]   --> src/em_training/model.rs:26:8
[INFO] [stdout]    |
[INFO] [stdout] 26 | pub fn encode_emit_base(dw_bucket: u8, base: u8) -> u8 {
[INFO] [stdout]    |        ^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `add_to_ctx_move_prob_numerator` and `add_to_move_ctx_emit_prob_numerator` are never used
[INFO] [stdout]    --> src/hmm_model.rs:317:12
[INFO] [stdout]     |
[INFO] [stdout] 309 | impl HmmBuilder {
[INFO] [stdout]     | --------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 317 |     pub fn add_to_ctx_move_prob_numerator(&mut self, ctx: u8, movement: TransState, prob: f64) {
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 321 |     pub fn add_to_move_ctx_emit_prob_numerator(
[INFO] [stdout]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `get_hmm_model` is never used
[INFO] [stdout]  --> src/hmm_models/v2.rs:5:8
[INFO] [stdout]   |
[INFO] [stdout] 5 | pub fn get_hmm_model() -> HmmModel {
[INFO] [stdout]   |        ^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 4.24s
[INFO] running `Command { std: "docker" "inspect" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stderr]  --> src/em_training/fb.rs:4:5
[INFO] [stderr]   |
[INFO] [stderr] 4 |     common::IDX_BASE_MAP,
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `decode_2_bases`
[INFO] [stderr]  --> src/em_training/fb.rs:8:20
[INFO] [stderr]   |
[INFO] [stderr] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stderr]   |                    ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `common::IDX_BASE_MAP`
[INFO] [stderr]  --> src/em_training/fb_v2.rs:4:5
[INFO] [stderr]   |
[INFO] [stderr] 4 |     common::IDX_BASE_MAP,
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `decode_2_bases`
[INFO] [stderr]  --> src/em_training/fb_v2.rs:8:20
[INFO] [stderr]   |
[INFO] [stderr] 8 | use super::model::{decode_2_bases, decode_emit_base, encode_2_bases, Template, TemplatePos};
[INFO] [stderr]   |                    ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `gskits::file_reader::bed_reader::BedRowData`
[INFO] [stderr]    --> src/em_training/fb_v2.rs:228:9
[INFO] [stderr]     |
[INFO] [stderr] 228 |     use gskits::file_reader::bed_reader::BedRowData;
[INFO] [stderr]     |         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `fb::veterbi_decode`
[INFO] [stderr]   --> src/em_training.rs:17:5
[INFO] [stderr]    |
[INFO] [stderr] 17 | use fb::veterbi_decode;
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary parentheses around method argument
[INFO] [stderr]    --> src/em_training.rs:273:9
[INFO] [stderr]     |
[INFO] [stderr] 273 |         (alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stderr]     |         ^
[INFO] [stderr] ...
[INFO] [stderr] 279 |             )),
[INFO] [stderr]     |              ^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr] 273 ~         alpha_dp[[tot_row - 2, tot_col - 2]]
[INFO] [stderr] 274 |             + beta_dp[[tot_row - 1, tot_col - 1]]
[INFO] [stderr] ...
[INFO] [stderr] 278 |                 cur_base_enc,
[INFO] [stderr] 279 ~             ),
[INFO] [stderr]     |
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `Array` and `stack`
[INFO] [stderr]  --> src/hmm_model.rs:2:18
[INFO] [stderr]   |
[INFO] [stderr] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stderr]   |                  ^^^^^  ^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `boundaries_4_100` and `v1`
[INFO] [stderr]   --> src/main.rs:16:18
[INFO] [stderr]    |
[INFO] [stderr] 16 | use hmm_models::{boundaries_4_100, v1};
[INFO] [stderr]    |                  ^^^^^^^^^^^^^^^^  ^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Dimension`
[INFO] [stderr]  --> src/hmm_model.rs:2:62
[INFO] [stderr]   |
[INFO] [stderr] 2 | use ndarray::{s, stack, Array, Array1, Array2, Array3, Axis, Dimension};
[INFO] [stderr]   |                                                              ^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `idx`
[INFO] [stderr]    --> src/em_training.rs:302:17
[INFO] [stderr]     |
[INFO] [stderr] 302 |             for idx in 0..100 {
[INFO] [stderr]     |                 ^^^ help: if this is intentional, prefix it with an underscore: `_idx`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `ref_base`
[INFO] [stderr]    --> src/supervised_training.rs:391:25
[INFO] [stderr]     |
[INFO] [stderr] 391 |                     let ref_base = ref_base as u8;
[INFO] [stderr]     |                         ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_ref_base`
[INFO] [stderr] 
[INFO] [stderr] warning: variable `cnt` is assigned to, but never used
[INFO] [stderr]   --> src/dataset.rs:65:9
[INFO] [stderr]    |
[INFO] [stderr] 65 |     let mut cnt = 0;
[INFO] [stderr]    |         ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: consider using `_cnt` instead
[INFO] [stderr] 
[INFO] [stderr] warning: value assigned to `cnt` is never read
[INFO] [stderr]   --> src/dataset.rs:68:9
[INFO] [stderr]    |
[INFO] [stderr] 68 |         cnt += 1;
[INFO] [stderr]    |         ^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = help: maybe it is overwritten before being read?
[INFO] [stderr]    = note: `#[warn(unused_assignments)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `encode_emit_base` is never used
[INFO] [stderr]   --> src/em_training/model.rs:26:8
[INFO] [stderr]    |
[INFO] [stderr] 26 | pub fn encode_emit_base(dw_bucket: u8, base: u8) -> u8 {
[INFO] [stderr]    |        ^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: methods `add_to_ctx_move_prob_numerator` and `add_to_move_ctx_emit_prob_numerator` are never used
[INFO] [stderr]    --> src/hmm_model.rs:317:12
[INFO] [stderr]     |
[INFO] [stderr] 309 | impl HmmBuilder {
[INFO] [stderr]     | --------------- methods in this implementation
[INFO] [stderr] ...
[INFO] [stderr] 317 |     pub fn add_to_ctx_move_prob_numerator(&mut self, ctx: u8, movement: TransState, prob: f64) {
[INFO] [stderr]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 321 |     pub fn add_to_move_ctx_emit_prob_numerator(
[INFO] [stderr]     |            ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `get_hmm_model` is never used
[INFO] [stderr]  --> src/hmm_models/v2.rs:5:8
[INFO] [stderr]   |
[INFO] [stderr] 5 | pub fn get_hmm_model() -> HmmModel {
[INFO] [stderr]   |        ^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `align-hmm` (bin "align-hmm" test) generated 17 warnings (run `cargo fix --bin "align-hmm" -p align-hmm --tests` to apply 11 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.28s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/align_hmm-d3fdfcbe5a807b51)
[INFO] [stdout] 
[INFO] [stdout] running 22 tests
[INFO] [stdout] test common::test::test_local_alignment_to_record ... ok
[INFO] [stdout] test dataset::test::test_encode_emit ... ok
[INFO] [stdout] test em_training::fb_v2::test::test_forward_backward ... ok
[INFO] [stdout] test em_training::fb::test::test_max_by ... ok
[INFO] [stdout] test em_training::fb::test::test_forward_backward ... ok
[INFO] [stdout] test em_training::fb::test::test_forward_backward_0 ... ok
[INFO] [stdout] test em_training::fb_v2::test::test_forward_backward_0 ... ok
[INFO] [stdout] test em_training::fb_v2::test::test_max_by ... ok
[INFO] [stdout] test hmm_model::test::test_builder_merge ... ok
[INFO] [stdout] test em_training::model::test::test_model ... ok
[INFO] [stdout] test hmm_model::test::test_exp ... ok
[INFO] [stdout] test hmm_model::test::test_ln ... ok
[INFO] [stdout] test hmm_model::test::test_max_axis_2d ... ok
[INFO] [stdout] test hmm_model::test::test_builder_v2 ... ok
[INFO] [stdout] test supervised_training::test::test_build_train_events ... ok
[INFO] [stdout] test hmm_model::test::test_stream_acc_log_prob ... ok
[INFO] [stdout] test em_training::test::test_train_with_single_ins ... ok
[INFO] [stdout] test common::test::test_train_instance ... FAILED
[INFO] [stdout] test em_training::fb_v2::test::test_veterbi_decode ... ok
[INFO] [stdout] test em_training::fb_v2::test::test_forward_backward_2 ... ok
[INFO] [stdout] test em_training::fb::test::test_forward_backward_2 ... ok
[INFO] [stdout] test em_training::fb::test::test_fb_3 ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- common::test::test_train_instance stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'common::test::test_train_instance' (13303) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/gskits-0.11.0/src/fastx_reader/fasta_reader.rs:15:39:
[INFO] [stdout] open file error: /data/ccs_data/HG002/GCA_000001405.15_GRCh38_no_alt_analysis_set.chr1-chr22.fasta: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5ed42184b211 - std[73adb7dc35730857]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x5ed42184b211 - std[73adb7dc35730857]::backtrace_rs::backtrace::trace_unsynchronized::<std[73adb7dc35730857]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x5ed42184b211 - std[73adb7dc35730857]::sys::backtrace::_print_fmt
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/backtrace.rs:74:9
[INFO] [stdout]    3:     0x5ed42184b211 - <<std[73adb7dc35730857]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[6883ba1bc0fe4ed1]::fmt::Display>::fmt
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/backtrace.rs:44:26
[INFO] [stdout]    4:     0x5ed42185f8ea - <core[6883ba1bc0fe4ed1]::fmt::rt::Argument>::fmt
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/fmt/rt.rs:152:76
[INFO] [stdout]    5:     0x5ed42185f8ea - core[6883ba1bc0fe4ed1]::fmt::write
[INFO] [stdout]    6:     0x5ed42184f7cc - std[73adb7dc35730857]::io::default_write_fmt::<alloc[55a36b64bcbf2c0d]::vec::Vec<u8>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/io/mod.rs:626:11
[INFO] [stdout]    7:     0x5ed42184f7cc - <alloc[55a36b64bcbf2c0d]::vec::Vec<u8> as std[73adb7dc35730857]::io::Write>::write_fmt
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/io/mod.rs:1730:13
[INFO] [stdout]    8:     0x5ed421829546 - <std[73adb7dc35730857]::sys::backtrace::BacktraceLock>::print
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/backtrace.rs:47:9
[INFO] [stdout]    9:     0x5ed421829546 - std[73adb7dc35730857]::panicking::default_hook::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:292:27
[INFO] [stdout]   10:     0x5ed421843089 - std[73adb7dc35730857]::panicking::default_hook
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:316:9
[INFO] [stdout]   11:     0x5ed421302c60 - <alloc[55a36b64bcbf2c0d]::boxed::Box<dyn for<'a, 'b> core[6883ba1bc0fe4ed1]::ops::function::Fn<(&'a std[73adb7dc35730857]::panic::PanicHookInfo<'b>,), Output = ()> + core[6883ba1bc0fe4ed1]::marker::Send + core[6883ba1bc0fe4ed1]::marker::Sync> as core[6883ba1bc0fe4ed1]::ops::function::Fn<(&std[73adb7dc35730857]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/alloc/src/boxed.rs:2333:9
[INFO] [stdout]   12:     0x5ed421302c60 - test[980ffaebd391d06d]::test_main_inner::<test[980ffaebd391d06d]::test_main_static::{closure#0}>::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:155:21
[INFO] [stdout]   13:     0x5ed4218433b2 - <alloc[55a36b64bcbf2c0d]::boxed::Box<dyn for<'a, 'b> core[6883ba1bc0fe4ed1]::ops::function::Fn<(&'a std[73adb7dc35730857]::panic::PanicHookInfo<'b>,), Output = ()> + core[6883ba1bc0fe4ed1]::marker::Send + core[6883ba1bc0fe4ed1]::marker::Sync> as core[6883ba1bc0fe4ed1]::ops::function::Fn<(&std[73adb7dc35730857]::panic::PanicHookInfo,)>>::call
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/alloc/src/boxed.rs:2333:9
[INFO] [stdout]   14:     0x5ed4218433b2 - std[73adb7dc35730857]::panicking::panic_with_hook
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:823:13
[INFO] [stdout]   15:     0x5ed4218295f2 - std[73adb7dc35730857]::panicking::panic_handler::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:688:13
[INFO] [stdout]   16:     0x5ed421820f29 - std[73adb7dc35730857]::sys::backtrace::__rust_end_short_backtrace::<std[73adb7dc35730857]::panicking::panic_handler::{closure#0}, !>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/backtrace.rs:182:18
[INFO] [stdout]   17:     0x5ed42182a1ed - __rustc[a7b7b02e776dd976]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:679:5
[INFO] [stdout]   18:     0x5ed4218600ec - core[6883ba1bc0fe4ed1]::panicking::panic_fmt
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/panicking.rs:80:14
[INFO] [stdout]   19:     0x5ed42185fe62 - core[6883ba1bc0fe4ed1]::result::unwrap_failed
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/result.rs:1870:5
[INFO] [stdout]   20:     0x5ed42138799e - <core[6883ba1bc0fe4ed1]::result::Result<std[73adb7dc35730857]::fs::File, core[6883ba1bc0fe4ed1]::io::error::Error>>::expect
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/result.rs:1183:23
[INFO] [stdout]   21:     0x5ed4213825d1 - <gskits[4641521a2225f51d]::fastx_reader::fasta_reader::FastaFileReader>::new
[INFO] [stdout]                                at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/gskits-0.11.0/src/fastx_reader/fasta_reader.rs:15:39
[INFO] [stdout]   22:     0x5ed4212ce6c4 - align_hmm[43f1969b4165c942]::common::test::test_train_instance
[INFO] [stdout]                                at /opt/rustwide/workdir/src/common.rs:540:27
[INFO] [stdout]   23:     0x5ed4212cd2d7 - align_hmm[43f1969b4165c942]::common::test::test_train_instance::{closure#0}
[INFO] [stdout]                                at /opt/rustwide/workdir/src/common.rs:537:29
[INFO] [stdout]   24:     0x5ed4212eaf56 - <align_hmm[43f1969b4165c942]::common::test::test_train_instance::{closure#0} as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x5ed4212f5f9b - <fn() -> core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String> as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   26:     0x5ed4212f5f9b - test[980ffaebd391d06d]::__rust_begin_short_backtrace::<core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String>, fn() -> core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:724:18
[INFO] [stdout]   27:     0x5ed4213035e5 - test[980ffaebd391d06d]::run_test_in_process::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:747:74
[INFO] [stdout]   28:     0x5ed4213035e5 - <core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<test[980ffaebd391d06d]::run_test_in_process::{closure#0}> as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   29:     0x5ed4213035e5 - std[73adb7dc35730857]::panicking::catch_unwind::do_call::<core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<test[980ffaebd391d06d]::run_test_in_process::{closure#0}>, core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:576:43
[INFO] [stdout]   30:     0x5ed4213035e5 - std[73adb7dc35730857]::panicking::catch_unwind::<core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String>, core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<test[980ffaebd391d06d]::run_test_in_process::{closure#0}>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:544:19
[INFO] [stdout]   31:     0x5ed4213035e5 - std[73adb7dc35730857]::panic::catch_unwind::<core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<test[980ffaebd391d06d]::run_test_in_process::{closure#0}>, core[6883ba1bc0fe4ed1]::result::Result<(), alloc[55a36b64bcbf2c0d]::string::String>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panic.rs:359:14
[INFO] [stdout]   32:     0x5ed4213035e5 - test[980ffaebd391d06d]::run_test_in_process
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:747:27
[INFO] [stdout]   33:     0x5ed4213035e5 - test[980ffaebd391d06d]::run_test::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:668:43
[INFO] [stdout]   34:     0x5ed4212fe094 - test[980ffaebd391d06d]::run_test::{closure#1}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/test/src/lib.rs:698:41
[INFO] [stdout]   35:     0x5ed4212fe094 - std[73adb7dc35730857]::sys::backtrace::__rust_begin_short_backtrace::<test[980ffaebd391d06d]::run_test::{closure#1}, ()>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/backtrace.rs:166:18
[INFO] [stdout]   36:     0x5ed421306732 - std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked::<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/thread/lifecycle.rs:70:13
[INFO] [stdout]   37:     0x5ed421306732 - <core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}> as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/panic/unwind_safe.rs:275:9
[INFO] [stdout]   38:     0x5ed421306732 - std[73adb7dc35730857]::panicking::catch_unwind::do_call::<core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:576:43
[INFO] [stdout]   39:     0x5ed421306732 - std[73adb7dc35730857]::panicking::catch_unwind::<(), core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panicking.rs:544:19
[INFO] [stdout]   40:     0x5ed421306732 - std[73adb7dc35730857]::panic::catch_unwind::<core[6883ba1bc0fe4ed1]::panic::unwind_safe::AssertUnwindSafe<std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}::{closure#0}>, ()>
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/panic.rs:359:14
[INFO] [stdout]   41:     0x5ed421306732 - std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked::<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/thread/lifecycle.rs:68:26
[INFO] [stdout]   42:     0x5ed421306732 - <std[73adb7dc35730857]::thread::lifecycle::spawn_unchecked<test[980ffaebd391d06d]::run_test::{closure#1}, ()>::{closure#1} as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once::{shim:vtable#0}
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   43:     0x5ed42184aa5f - <alloc[55a36b64bcbf2c0d]::boxed::Box<dyn core[6883ba1bc0fe4ed1]::ops::function::FnOnce<(), Output = ()> + core[6883ba1bc0fe4ed1]::marker::Send> as core[6883ba1bc0fe4ed1]::ops::function::FnOnce<()>>::call_once
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/alloc/src/boxed.rs:2319:9
[INFO] [stdout]   44:     0x5ed42184aa5f - <std[73adb7dc35730857]::sys::thread::unix::Thread>::new::thread_start
[INFO] [stdout]                                at /rustc/6b3fa26749ab40e159b2dd5cf577acaaf5902772/library/std/src/sys/thread/unix.rs:123:17
[INFO] [stdout]   45:     0x756d9cbefaa4 - <unknown>
[INFO] [stdout]   46:     0x756d9cc7ca64 - clone
[INFO] [stdout]   47:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     common::test::test_train_instance
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 21 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.91s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--bin align-hmm`
[INFO] running `Command { std: "docker" "inspect" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd", kill_on_drop: false }`
[INFO] [stdout] f091eeedbbe3136b0de35f191d1bd5f74381e7d70922bda215fa1dc0c59595fd
