[INFO] cloning repository https://github.com/ilaykav/scvelo-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/ilaykav/scvelo-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Filaykav%2Fscvelo-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Filaykav%2Fscvelo-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] d73699cbb23f64dee760fcf1e6a95d893d363eea
[INFO] testing ilaykav/scvelo-rs against 1.98.0-beta.1 for beta-1.98-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Filaykav%2Fscvelo-rs" "/workspace/builds/worker-7-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/ilaykav/scvelo-rs
[INFO] finished tweaking git repo https://github.com/ilaykav/scvelo-rs
[INFO] tweaked toml for git repo https://github.com/ilaykav/scvelo-rs written to /workspace/builds/worker-7-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/ilaykav/scvelo-rs on toolchain 1.98.0-beta.1
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/ilaykav/scvelo-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.98.0-beta.1" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }`
[INFO] [stdout] 94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e
[INFO] running `Command { std: "docker" "start" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.8.0
[INFO] [stderr]    Compiling regex-syntax v0.8.10
[INFO] [stderr]    Compiling zerocopy v0.8.48
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling shlex v2.0.1
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling pyo3-build-config v0.22.6
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling bytemuck v1.25.0
[INFO] [stderr]    Compiling rayon v1.12.0
[INFO] [stderr]    Compiling anstream v1.0.0
[INFO] [stderr]    Compiling jiff v0.2.24
[INFO] [stderr]    Compiling cc v1.2.63
[INFO] [stderr]    Compiling rand_core v0.9.5
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling cpu-time v1.0.0
[INFO] [stderr]    Compiling num_cpus v1.17.0
[INFO] [stderr]    Compiling unindent v0.2.4
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling combine v4.6.7
[INFO] [stderr]    Compiling hashbrown v0.17.1
[INFO] [stderr]    Compiling wide v0.7.33
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.49
[INFO] [stderr]    Compiling indexmap v2.14.0
[INFO] [stderr]    Compiling pyo3-macros-backend v0.22.6
[INFO] [stderr]    Compiling pyo3-ffi v0.22.6
[INFO] [stderr]    Compiling pyo3 v0.22.6
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling simba v0.9.1
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr]    Compiling mimalloc v0.1.52
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling rand v0.9.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling enum-as-inner v0.6.1
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling env_filter v1.0.1
[INFO] [stderr]    Compiling env_logger v0.11.10
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling sysctl v0.6.0
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling anndists v0.1.5
[INFO] [stderr]    Compiling mmap-rs v0.7.0
[INFO] [stderr]    Compiling pyo3-macros v0.22.6
[INFO] [stderr]    Compiling nalgebra v0.33.3
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling hnsw_rs v0.3.4
[INFO] [stderr]    Compiling numpy v0.22.1
[INFO] [stderr]    Compiling scvelo-rs v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 17s
[INFO] running `Command { std: "docker" "inspect" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stderr]    Compiling scvelo-rs v0.1.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 8.70s
[INFO] running `Command { std: "docker" "inspect" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e" "/opt/rustwide/cargo-home/bin/cargo" "+1.98.0-beta.1" "test" "--frozen", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.20s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/scvelo_rs-0c4579225e9dc77f)
[INFO] [stdout] 
[INFO] [stdout] running 26 tests
[INFO] [stdout] test csr::tests::matvec_dense_3x3 ... ok
[INFO] [stdout] test csr::tests::matvec_multi_matches_per_column ... ok
[INFO] [stdout] test align_dynamics::tests::align_skips_nan_genes ... ok
[INFO] [stdout] test divergence::assign::tests::assign_timepoints_smoke ... ok
[INFO] [stdout] test csr::tests::matvec_identity ... ok
[INFO] [stdout] test dynamics::tests::clipped_log_clips_both_bounds ... ok
[INFO] [stdout] test divergence::increments::tests::diff_with_prepend_zero_matches_numpy ... ok
[INFO] [stdout] test dynamics::tests::invert_zero_returns_zero ... ok
[INFO] [stdout] test dynamics::tests::vectorize_induction_matches_t ... ok
[INFO] [stdout] test dynamics::tests::vectorize_repression_uses_switch_point ... ok
[INFO] [stdout] test nelder_mead::tests::callback_sees_best_per_iter ... ok
[INFO] [stdout] test dynamics::tests::clipped_log_inside_interval ... ok
[INFO] [stdout] test projection::tests::closed_form_at_zero ... ok
[INFO] [stdout] test nelder_mead::tests::rosenbrock_minimum ... ok
[INFO] [stdout] test nelder_mead::tests::quadratic_immediate ... ok
[INFO] [stdout] test numpy_compat::tests::argmin_axis0_first_wins_on_tie ... ok
[INFO] [stdout] test dynamics::tests::tau_inv_u_only_branch_when_gamma_ge_beta ... ok
[INFO] [stdout] test numpy_compat::tests::mean_basic ... ok
[INFO] [stdout] test numpy_compat::tests::pairwise_sum_large_stable_for_uniform ... ok
[INFO] [stdout] test numpy_compat::tests::pairwise_sum_small_matches_naive ... ok
[INFO] [stdout] test numpy_compat::tests::percentile_99_5_of_arange ... ok
[INFO] [stdout] test dynamics::tests::unspliced_at_zero_returns_u0 ... ok
[INFO] [stdout] test em::tests::fit_all_genes_smoke ... ok
[INFO] [stdout] test recovery::api::tests::smoke_synthetic_gene ... ok
[INFO] [stdout] test dynamics::tests::spliced_at_zero_returns_s0 ... ok
[INFO] [stdout] test projection::tests::project_picks_nearest_point ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.11s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests scvelo_rs
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e", kill_on_drop: false }`
[INFO] [stdout] 94f715f90d1e693508f19b36addac9127d89f4e5bef8358c92dabbd99377609e
