[INFO] cloning repository https://github.com/HuangShiLab/meta2bseek [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/HuangShiLab/meta2bseek" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] a9e91f8c8adc2778f4496eee1da7779da2e53c2e [INFO] testing HuangShiLab/meta2bseek against 1.97.0-beta.6 for beta-1.98-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FHuangShiLab%2Fmeta2bseek" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/HuangShiLab/meta2bseek [INFO] finished tweaking git repo https://github.com/HuangShiLab/meta2bseek [INFO] tweaked toml for git repo https://github.com/HuangShiLab/meta2bseek written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/HuangShiLab/meta2bseek on toolchain 1.97.0-beta.6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/HuangShiLab/meta2bseek already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.97.0-beta.6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded colored v2.2.0 [INFO] [stderr] Downloaded tikv-jemallocator v0.5.4 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded scalable_cuckoo_filter v0.2.4 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded memory-stats v1.2.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded indexmap v2.13.1 [INFO] [stderr] Downloaded xz2 v0.1.7 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded bytecount v0.6.9 [INFO] [stderr] Downloaded simba v0.6.0 [INFO] [stderr] Downloaded sysinfo v0.29.11 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded ndarray v0.15.6 [INFO] [stderr] Downloaded nalgebra v0.29.0 [INFO] [stderr] Downloaded lzma-sys v0.1.20 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-m" "1610612736" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3d5ced03c013a94a2f102a4510f48a6e9184255caf5fd8244f58017bde7f5210" "sleep" "infinity", kill_on_drop: false }` [INFO] [stdout] c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3 [INFO] running `Command { std: "docker" "start" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.45 [INFO] [stderr] Compiling libc v0.2.184 [INFO] [stderr] Compiling libm v0.2.16 [INFO] [stderr] Compiling find-msvc-tools v0.1.9 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling cfg-if v1.0.4 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling memchr v2.8.0 [INFO] [stderr] Compiling zerocopy v0.8.48 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling bytemuck v1.25.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling itoa v1.0.18 [INFO] [stderr] Compiling rustversion v1.0.22 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling cc v1.2.59 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.8.10 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling typenum v1.19.0 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling aho-corasick v1.1.4 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling hashbrown v0.16.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling time-core v0.1.8 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling zmij v1.0.21 [INFO] [stderr] Compiling ryu v1.0.23 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling indexmap v2.13.1 [INFO] [stderr] Compiling simd-adler32 v0.3.9 [INFO] [stderr] Compiling num-conv v0.2.1 [INFO] [stderr] Compiling time-macros v0.2.27 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling deranged v0.5.8 [INFO] [stderr] Compiling getrandom v0.2.17 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling regex-automata v0.4.14 [INFO] [stderr] Compiling tikv-jemalloc-sys v0.5.4+5.3.0-patched [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] 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[stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling buffer-redux v1.1.0 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling once_cell v1.21.4 [INFO] [stderr] Compiling siphasher v1.0.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling humantime v2.3.0 [INFO] [stderr] Compiling unsafe-libyaml v0.2.11 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling memory-stats v1.2.0 [INFO] [stderr] Compiling glob v0.3.3 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling regex v1.12.3 [INFO] [stderr] Compiling clap_derive v4.6.0 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling sysinfo v0.29.11 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling clap v4.6.0 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling scalable_cuckoo_filter v0.2.4 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling serde_yaml v0.9.34+deprecated [INFO] [stderr] Compiling bincode v1.3.3 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling tikv-jemallocator v0.5.4 [INFO] [stderr] Compiling meta2bseek v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:467:5 [INFO] [stdout] | [INFO] [stdout] 467 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:147:8 [INFO] [stdout] | [INFO] [stdout] 147 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:1047:4 [INFO] [stdout] | [INFO] [stdout] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1258:4 [INFO] [stdout] | [INFO] [stdout] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:467:5 [INFO] [stdout] | [INFO] [stdout] 467 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `QueryArgs` is never constructed [INFO] [stdout] --> src/cmdline.rs:299:12 [INFO] [stdout] | [INFO] [stdout] 299 | pub struct QueryArgs { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stdout] --> src/extract.rs:388:12 [INFO] [stdout] | [INFO] [stdout] 388 | pub struct GenomeSketchInspect { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DatabaseSketch` is never constructed [INFO] [stdout] --> src/extract.rs:407:12 [INFO] [stdout] | [INFO] [stdout] 407 | pub struct DatabaseSketch { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type alias `Hash` is never used [INFO] [stdout] --> src/sketch.rs:20:10 [INFO] [stdout] | [INFO] [stdout] 20 | pub type Hash = u64; [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `file_path` is never read [INFO] [stdout] --> src/contain.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 123 | pub struct GenomeProfileResult { [INFO] [stdout] | ------------------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:147:8 [INFO] [stdout] | [INFO] [stdout] 147 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `query_single_file` is never used [INFO] [stdout] --> src/contain.rs:947:8 [INFO] [stdout] | [INFO] [stdout] 947 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:1047:4 [INFO] [stdout] | [INFO] [stdout] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1258:4 [INFO] [stdout] | [INFO] [stdout] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `DEFAULT_FPR` is never used [INFO] [stdout] --> src/constants.rs:18:11 [INFO] [stdout] | [INFO] [stdout] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hash_string` is never used [INFO] [stdout] --> src/constants.rs:25:8 [INFO] [stdout] | [INFO] [stdout] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 36s [INFO] running `Command { std: "docker" "inspect" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stderr] Compiling meta2bseek v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:467:5 [INFO] [stdout] | [INFO] [stdout] 467 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:147:8 [INFO] [stdout] | [INFO] [stdout] 147 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:1047:4 [INFO] [stdout] | [INFO] [stdout] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1258:4 [INFO] [stdout] | [INFO] [stdout] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::thread` [INFO] [stdout] --> src/contain.rs:13:5 [INFO] [stdout] | [INFO] [stdout] 13 | use std::thread; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::time::Duration` [INFO] [stdout] --> src/contain.rs:14:5 [INFO] [stdout] | [INFO] [stdout] 14 | use std::time::Duration; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `memory_stats::memory_stats` [INFO] [stdout] --> src/contain.rs:15:5 [INFO] [stdout] | [INFO] [stdout] 15 | use memory_stats::memory_stats; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:467:5 [INFO] [stdout] | [INFO] [stdout] 467 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:147:8 [INFO] [stdout] | [INFO] [stdout] 147 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:1047:4 [INFO] [stdout] | [INFO] [stdout] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1258:4 [INFO] [stdout] | [INFO] [stdout] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `sample_entries` [INFO] [stdout] --> src/contain.rs:467:5 [INFO] [stdout] | [INFO] [stdout] 467 | sample_entries: &[SylspEntry] [INFO] [stdout] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `QueryArgs` is never constructed [INFO] [stdout] --> src/cmdline.rs:299:12 [INFO] [stdout] | [INFO] [stdout] 299 | pub struct QueryArgs { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stdout] --> src/extract.rs:388:12 [INFO] [stdout] | [INFO] [stdout] 388 | pub struct GenomeSketchInspect { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `DatabaseSketch` is never constructed [INFO] [stdout] --> src/extract.rs:407:12 [INFO] [stdout] | [INFO] [stdout] 407 | pub struct DatabaseSketch { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type alias `Hash` is never used [INFO] [stdout] --> src/sketch.rs:20:10 [INFO] [stdout] | [INFO] [stdout] 20 | pub type Hash = u64; [INFO] [stdout] | ^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `file_path` is never read [INFO] [stdout] --> src/contain.rs:126:9 [INFO] [stdout] | [INFO] [stdout] 123 | pub struct GenomeProfileResult { [INFO] [stdout] | ------------------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `ReassignmentStats` is never constructed [INFO] [stdout] --> src/contain.rs:147:8 [INFO] [stdout] | [INFO] [stdout] 147 | struct ReassignmentStats { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `query_single_file` is never used [INFO] [stdout] --> src/contain.rs:947:8 [INFO] [stdout] | [INFO] [stdout] 947 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `extract_genome_id` is never used [INFO] [stdout] --> src/contain.rs:1047:4 [INFO] [stdout] | [INFO] [stdout] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `read_genome_mapping` is never used [INFO] [stdout] --> src/contain.rs:1258:4 [INFO] [stdout] | [INFO] [stdout] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `DEFAULT_FPR` is never used [INFO] [stdout] --> src/constants.rs:18:11 [INFO] [stdout] | [INFO] [stdout] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hash_string` is never used [INFO] [stdout] --> src/constants.rs:25:8 [INFO] [stdout] | [INFO] [stdout] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.61s [INFO] running `Command { std: "docker" "inspect" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "exec" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-w" "/opt/rustwide/workdir" "--user" "0:0" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3" "/opt/rustwide/cargo-home/bin/cargo" "+1.97.0-beta.6" "test" "--frozen", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::thread` [INFO] [stderr] --> src/contain.rs:13:5 [INFO] [stderr] | [INFO] [stderr] 13 | use std::thread; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::time::Duration` [INFO] [stderr] --> src/contain.rs:14:5 [INFO] [stderr] | [INFO] [stderr] 14 | use std::time::Duration; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `memory_stats::memory_stats` [INFO] [stderr] --> src/contain.rs:15:5 [INFO] [stderr] | [INFO] [stderr] 15 | use memory_stats::memory_stats; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `sample_entries` [INFO] [stderr] --> src/contain.rs:467:5 [INFO] [stderr] | [INFO] [stderr] 467 | sample_entries: &[SylspEntry] [INFO] [stderr] | ^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_sample_entries` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: struct `ReassignmentStats` is never constructed [INFO] [stderr] --> src/contain.rs:147:8 [INFO] [stderr] | [INFO] [stderr] 147 | struct ReassignmentStats { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: function `extract_genome_id` is never used [INFO] [stderr] --> src/contain.rs:1047:4 [INFO] [stderr] | [INFO] [stderr] 1047 | fn extract_genome_id(file_path: &str) -> String { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `read_genome_mapping` is never used [INFO] [stderr] --> src/contain.rs:1258:4 [INFO] [stderr] | [INFO] [stderr] 1258 | fn read_genome_mapping(db_path: &str) -> Result> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `meta2bseek` (lib) generated 7 warnings (run `cargo fix --lib -p meta2bseek` to apply 4 suggestions) [INFO] [stderr] warning: `meta2bseek` (lib test) generated 7 warnings (7 duplicates) [INFO] [stderr] warning: struct `QueryArgs` is never constructed [INFO] [stderr] --> src/cmdline.rs:299:12 [INFO] [stderr] | [INFO] [stderr] 299 | pub struct QueryArgs { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: struct `GenomeSketchInspect` is never constructed [INFO] [stderr] --> src/extract.rs:388:12 [INFO] [stderr] | [INFO] [stderr] 388 | pub struct GenomeSketchInspect { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: struct `DatabaseSketch` is never constructed [INFO] [stderr] --> src/extract.rs:407:12 [INFO] [stderr] | [INFO] [stderr] 407 | pub struct DatabaseSketch { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: type alias `Hash` is never used [INFO] [stderr] --> src/sketch.rs:20:10 [INFO] [stderr] | [INFO] [stderr] 20 | pub type Hash = u64; [INFO] [stderr] | ^^^^ [INFO] [stderr] [INFO] [stderr] warning: field `file_path` is never read [INFO] [stderr] --> src/contain.rs:126:9 [INFO] [stderr] | [INFO] [stderr] 123 | pub struct GenomeProfileResult { [INFO] [stderr] | ------------------- field in this struct [INFO] [stderr] ... [INFO] [stderr] 126 | pub file_path: String, // 新增字段,存储文件路径 [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `GenomeProfileResult` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis [INFO] [stderr] [INFO] [stderr] warning: struct `ReassignmentStats` is never constructed [INFO] [stderr] --> src/contain.rs:147:8 [INFO] [stderr] | [INFO] [stderr] 147 | struct ReassignmentStats { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `query_single_file` is never used [INFO] [stderr] --> src/contain.rs:947:8 [INFO] [stderr] | [INFO] [stderr] 947 | pub fn query_single_file(sample_path: &str, db_path: &str, min_ani: f64) -> Result> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `DEFAULT_FPR` is never used [INFO] [stderr] --> src/constants.rs:18:11 [INFO] [stderr] | [INFO] [stderr] 18 | pub const DEFAULT_FPR: f64 = 0.0001; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: function `hash_string` is never used [INFO] [stderr] --> src/constants.rs:25:8 [INFO] [stderr] | [INFO] [stderr] 25 | pub fn hash_string(s: &str) -> Hash { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `meta2bseek` (bin "meta2bseek" test) generated 15 warnings (6 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/meta2bseek-92b51d9cf295cb44) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/meta2bseek-c48ad918b6a6e2b4) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test mark::tests::test_mark_unique_tags ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests meta2bseek [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3", kill_on_drop: false }` [INFO] [stdout] c34e2001e50558a353af562ddefe62e339f67cf3fc7e5f19bb4b3129bc948df3