[INFO] cloning repository https://github.com/bede/deacon [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/bede/deacon" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbede%2Fdeacon", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbede%2Fdeacon'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c2af09e61f1df50fd9f2e67d9c5d903d517be89e [INFO] documenting bede/deacon against beta-2026-04-21 for beta-1.96-rustdoc-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fbede%2Fdeacon" "/workspace/builds/worker-6-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc2/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-6-tc2/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/bede/deacon [INFO] removed 0 missing tests [INFO] finished tweaking git repo https://github.com/bede/deacon [INFO] tweaked toml for git repo https://github.com/bede/deacon written to /workspace/builds/worker-6-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/bede/deacon on toolchain beta-2026-04-21 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-04-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/bede/deacon already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-04-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded mem_dbg-derive v0.2.1 [INFO] [stderr] Downloaded seq-hash v0.1.2 [INFO] [stderr] Downloaded mem_dbg v0.3.4 [INFO] [stderr] Downloaded packed-seq v4.4.2 [INFO] [stderr] Downloaded simd-minimizers v2.3.1 [INFO] [stderr] Downloaded toml_edit v0.25.4+spec-1.1.0 [INFO] [stderr] Downloaded ensure_simd v0.1.0 [INFO] [stderr] Downloaded buffer-redux v1.1.0 [INFO] [stderr] Downloaded minreq v2.14.1 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded bgzip v0.3.1 [INFO] [stderr] Downloaded niffler v3.0.0 [INFO] [stderr] Downloaded paraseq v0.4.8 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] [stderr] Downloaded gzp v2.0.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a1d311cbf2da0bf2ecb1f4a987e0ff7594ae52da354030938f1aaedb783ac402 [INFO] running `Command { std: "docker" "start" "-a" "a1d311cbf2da0bf2ecb1f4a987e0ff7594ae52da354030938f1aaedb783ac402", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a1d311cbf2da0bf2ecb1f4a987e0ff7594ae52da354030938f1aaedb783ac402", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a1d311cbf2da0bf2ecb1f4a987e0ff7594ae52da354030938f1aaedb783ac402", kill_on_drop: false }` [INFO] [stdout] a1d311cbf2da0bf2ecb1f4a987e0ff7594ae52da354030938f1aaedb783ac402 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a77d2da704eb606e76f35250e7ddf55fbbe6adb8cc40508e7082fc32509ab8f0 [INFO] running `Command { std: "docker" "start" "-a" "a77d2da704eb606e76f35250e7ddf55fbbe6adb8cc40508e7082fc32509ab8f0", kill_on_drop: false }` [INFO] [stderr] Compiling zerocopy v0.8.42 [INFO] [stderr] Checking zlib-rs v0.6.3 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Compiling cc v1.2.56 [INFO] [stderr] Checking bytemuck v1.25.0 [INFO] [stderr] Checking regex-automata v0.4.14 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Checking anstream v1.0.0 [INFO] [stderr] Checking num_cpus v1.17.0 [INFO] [stderr] Checking ensure_simd v0.1.0 [INFO] [stderr] Checking rayon v1.11.0 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Checking anstream v0.6.21 [INFO] [stderr] Compiling virtue v0.0.18 [INFO] [stderr] Checking futures-core v0.3.32 [INFO] [stderr] Checking rustls-native-certs v0.6.3 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Checking buffer-redux v1.1.0 [INFO] [stderr] Checking bytecount v0.6.9 [INFO] [stderr] Checking core_affinity v0.8.3 [INFO] [stderr] Checking nanorand v0.7.0 [INFO] [stderr] Checking unty v0.0.4 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Checking serde_json v1.0.149 [INFO] [stderr] Checking clap_builder v4.6.0 [INFO] [stderr] Checking rapidhash v4.4.1 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Checking flume v0.11.1 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Compiling bincode_derive v2.0.1 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling ring v0.17.14 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Checking bzip2 v0.5.2 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking regex v1.12.3 [INFO] [stderr] Checking env_filter v1.0.0 [INFO] [stderr] Checking env_logger v0.11.9 [INFO] [stderr] Compiling rustls v0.21.12 [INFO] [stderr] Checking liblzma v0.3.6 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling mem_dbg-derive v0.2.1 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling clap_derive v4.6.0 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Checking sct v0.7.1 [INFO] [stderr] Checking rustls-webpki v0.101.7 [INFO] [stderr] Checking mem_dbg v0.3.4 [INFO] [stderr] Checking thiserror v2.0.18 [INFO] [stderr] Checking gzp v2.0.2 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking bgzip v0.3.1 [INFO] [stderr] Checking clap v4.6.0 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Checking rand_chacha v0.9.0 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking rand v0.9.2 [INFO] [stderr] Checking niffler v3.0.0 [INFO] [stderr] Checking needletail v0.6.3 [INFO] [stderr] Checking minreq v2.14.1 [INFO] [stderr] Checking paraseq v0.4.8 [INFO] [stderr] Checking packed-seq v4.4.2 [INFO] [stderr] Checking serde v1.0.228 [INFO] [stderr] Checking seq-hash v0.1.2 [INFO] [stderr] Checking simd-minimizers v2.3.1 [INFO] [stderr] Checking bincode v2.0.1 [INFO] [stderr] Documenting deacon v0.15.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/../README.md:329:19 [INFO] [stdout] | [INFO] [stdout] 329 | Work in progress: https://github.com/galaxyproject/tools-iuc/pull/7473 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] = note: `#[warn(rustdoc::bare_urls)]` on by default [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 329 | Work in progress: [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/../README.md:339:124 [INFO] [stdout] | [INFO] [stdout] 339 | ...zers, *fast*" *bioRxiv* 2025.01.27.634998, https://doi.org/10.1101/2025.01.27.634998 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 339 | > Ragnar Groot Koerkamp, Igor Martayan. "SimdMinimizers: Computing random minimizers, *fast*" *bioRxiv* 2025.01.27.634998, [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 35.63s [INFO] [stderr] Generated /opt/rustwide/target/doc/deacon/index.html [INFO] running `Command { std: "docker" "inspect" "a77d2da704eb606e76f35250e7ddf55fbbe6adb8cc40508e7082fc32509ab8f0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a77d2da704eb606e76f35250e7ddf55fbbe6adb8cc40508e7082fc32509ab8f0", kill_on_drop: false }` [INFO] [stdout] a77d2da704eb606e76f35250e7ddf55fbbe6adb8cc40508e7082fc32509ab8f0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7f6fa888419ae9132457f45344e0aff4bbb7ca730e87877d96231c0d2944e7c1 [INFO] running `Command { std: "docker" "start" "-a" "7f6fa888419ae9132457f45344e0aff4bbb7ca730e87877d96231c0d2944e7c1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.106 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.18 [INFO] [stderr] Compiling anyhow v1.0.102 [INFO] [stderr] Compiling quote v1.0.45 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling mem_dbg-derive v0.2.1 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling clap_derive v4.6.0 [INFO] [stderr] Checking mem_dbg v0.3.4 [INFO] [stderr] Checking packed-seq v4.4.2 [INFO] [stderr] Checking gzp v2.0.2 [INFO] [stderr] Checking seq-hash v0.1.2 [INFO] [stderr] Checking bgzip v0.3.1 [INFO] [stderr] Checking niffler v3.0.0 [INFO] [stderr] Checking clap v4.6.0 [INFO] [stderr] Checking simd-minimizers v2.3.1 [INFO] [stderr] Checking paraseq v0.4.8 [INFO] [stderr] Checking serde v1.0.228 [INFO] [stderr] Checking bincode v2.0.1 [INFO] [stderr] Documenting deacon v0.15.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/../README.md:329:19 [INFO] [stdout] | [INFO] [stdout] 329 | Work in progress: https://github.com/galaxyproject/tools-iuc/pull/7473 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] = note: `#[warn(rustdoc::bare_urls)]` on by default [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 329 | Work in progress: [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: this URL is not a hyperlink [INFO] [stdout] --> src/../README.md:339:124 [INFO] [stdout] | [INFO] [stdout] 339 | ...zers, *fast*" *bioRxiv* 2025.01.27.634998, https://doi.org/10.1101/2025.01.27.634998 [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: bare URLs are not automatically turned into clickable links [INFO] [stdout] help: use an automatic link instead [INFO] [stdout] | [INFO] [stdout] 339 | > Ragnar Groot Koerkamp, Igor Martayan. "SimdMinimizers: Computing random minimizers, *fast*" *bioRxiv* 2025.01.27.634998, [INFO] [stdout] | + + [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 10.70s [INFO] [stderr] Generated /opt/rustwide/target/doc/deacon/index.html [INFO] running `Command { std: "docker" "inspect" "7f6fa888419ae9132457f45344e0aff4bbb7ca730e87877d96231c0d2944e7c1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7f6fa888419ae9132457f45344e0aff4bbb7ca730e87877d96231c0d2944e7c1", kill_on_drop: false }` [INFO] [stdout] 7f6fa888419ae9132457f45344e0aff4bbb7ca730e87877d96231c0d2944e7c1