[INFO] fetching crate pombase-gocam 0.129.0...
[INFO] testing pombase-gocam-0.129.0 against beta-2026-04-21 for beta-1.96-2
[INFO] extracting crate pombase-gocam 0.129.0 into /workspace/builds/worker-1-tc2/source
[INFO] started tweaking crates.io crate pombase-gocam 0.129.0
[INFO] finished tweaking crates.io crate pombase-gocam 0.129.0
[INFO] tweaked toml for crates.io crate pombase-gocam 0.129.0 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate pombase-gocam 0.129.0 on toolchain beta-2026-04-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-04-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate pombase-gocam 0.129.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-04-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f0d883d6824d26b74776f2e373810d5cbea471db64797e193aaa11872ce7976c
[INFO] running `Command { std: "docker" "start" "-a" "f0d883d6824d26b74776f2e373810d5cbea471db64797e193aaa11872ce7976c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f0d883d6824d26b74776f2e373810d5cbea471db64797e193aaa11872ce7976c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f0d883d6824d26b74776f2e373810d5cbea471db64797e193aaa11872ce7976c", kill_on_drop: false }`
[INFO] [stdout] f0d883d6824d26b74776f2e373810d5cbea471db64797e193aaa11872ce7976c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 8e07903f364335b92d70765273d93f384d38a25cf4265020c60afc444758259e
[INFO] running `Command { std: "docker" "start" "-a" "8e07903f364335b92d70765273d93f384d38a25cf4265020c60afc444758259e", kill_on_drop: false }`
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling unsafe-libyaml v0.2.11
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling phf_generator v0.11.3
[INFO] [stderr]    Compiling syn v2.0.117
[INFO] [stderr]    Compiling serde_json v1.0.149
[INFO] [stderr]    Compiling serde_yaml v0.9.34+deprecated
[INFO] [stderr]    Compiling regex-automata v0.4.14
[INFO] [stderr]    Compiling phf_macros v0.11.3
[INFO] [stderr]    Compiling thiserror-impl v2.0.18
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling regex v1.12.3
[INFO] [stderr]    Compiling phf v0.11.3
[INFO] [stderr]    Compiling thiserror v2.0.18
[INFO] [stderr]    Compiling petgraph v0.8.3
[INFO] [stderr]    Compiling pombase-gocam v0.129.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.29s
[INFO] running `Command { std: "docker" "inspect" "8e07903f364335b92d70765273d93f384d38a25cf4265020c60afc444758259e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8e07903f364335b92d70765273d93f384d38a25cf4265020c60afc444758259e", kill_on_drop: false }`
[INFO] [stdout] 8e07903f364335b92d70765273d93f384d38a25cf4265020c60afc444758259e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d1e43f64ab9d0573d95950dd5196f88dc24ce9d861fb84f16aa5cac50c1d10bb
[INFO] running `Command { std: "docker" "start" "-a" "d1e43f64ab9d0573d95950dd5196f88dc24ce9d861fb84f16aa5cac50c1d10bb", kill_on_drop: false }`
[INFO] [stderr]    Compiling pombase-gocam v0.129.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 6.12s
[INFO] running `Command { std: "docker" "inspect" "d1e43f64ab9d0573d95950dd5196f88dc24ce9d861fb84f16aa5cac50c1d10bb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d1e43f64ab9d0573d95950dd5196f88dc24ce9d861fb84f16aa5cac50c1d10bb", kill_on_drop: false }`
[INFO] [stdout] d1e43f64ab9d0573d95950dd5196f88dc24ce9d861fb84f16aa5cac50c1d10bb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-04-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] f05934cb86be567a4925fbad10e006ef434e1ee226875a4b732b2aa94b568b46
[INFO] running `Command { std: "docker" "start" "-a" "f05934cb86be567a4925fbad10e006ef434e1ee226875a4b732b2aa94b568b46", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/pombase_gocam-b054b6805aa8883d)
[INFO] [stdout] 
[INFO] [stdout] running 27 tests
[INFO] [stdout] test graph::tests::parse_raw_test ... ok
[INFO] [stdout] test raw::tests::parse_raw_test_with_complement ... ok
[INFO] [stdout] test overlaps::tests::overlap_home_model_test ... ok
[INFO] [stdout] test overlaps::tests::find_overlaps_test ... ok
[INFO] [stdout] test gocam_py::tests::parse_test ... ok
[INFO] [stdout] test tests::parse_yaml_test ... ok
[INFO] [stdout] test overlaps::tests::overlap_test ... ok
[INFO] [stdout] test tests::remove_chemicals_test ... ok
[INFO] [stdout] test tests::test_genes_enabling_activities ... ok
[INFO] [stdout] test tests::merge_test ... ok
[INFO] [stdout] test tests::merge_test_mss51_remove_chemicals ... ok
[INFO] [stdout] test tests::test_genes_in_model ... ok
[INFO] [stdout] test tests::merge_test_mss51 ... ok
[INFO] [stdout] test tests::retain_largest_subgraph_test ... ok
[INFO] [stdout] test tests::retain_enabling_genes_test ... ok
[INFO] [stdout] test tests::parse_test ... ok
[INFO] [stdout] test tests::test_has_location ... ok
[INFO] [stdout] test raw::tests::parse_raw_test ... ok
[INFO] [stdout] test overlaps::tests::test_node_rel_direction ... ok
[INFO] [stdout] test tests::model_activity_enabled_by_test ... ok
[INFO] [stdout] test tests::test_modified_genes_in_model ... ok
[INFO] [stdout] test overlaps::tests::test_inputs_outputs_of ... ok
[INFO] [stdout] test overlaps::tests::test_inputs_for ... ok
[INFO] [stdout] test tests::remove_chemicals_inputs_outputs_only_test ... ok
[INFO] [stdout] test overlaps::tests::test_outputs_for ... ok
[INFO] [stdout] test tests::location_of_chemical ... ok
[INFO] [stdout] test tests::merge_test_three_models ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 27 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.23s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests pombase_gocam
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test src/raw.rs - raw (line 8) ... ok
[INFO] [stdout] test src/lib.rs - GoCamModel::new_from_raw (line 265) ... ok
[INFO] [stdout] test src/lib.rs - (line 17) ... ok
[INFO] [stdout] test src/raw.rs - raw::GoCamRawModel (line 274) ... ok
[INFO] [stdout] test src/lib.rs - parse_raw_gocam_model (line 1874) ... ok
[INFO] [stdout] test src/raw.rs - raw::gocam_parse_raw (line 436) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s
[INFO] [stdout] 
[INFO] [stdout] all doctests ran in 1.08s; merged doctests compilation took 1.00s
[INFO] running `Command { std: "docker" "inspect" "f05934cb86be567a4925fbad10e006ef434e1ee226875a4b732b2aa94b568b46", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f05934cb86be567a4925fbad10e006ef434e1ee226875a4b732b2aa94b568b46", kill_on_drop: false }`
[INFO] [stdout] f05934cb86be567a4925fbad10e006ef434e1ee226875a4b732b2aa94b568b46
