[INFO] cloning repository https://github.com/inc0/sdf-utils [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/inc0/sdf-utils" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] d3a325c1b6fe342717bb41796ce34e4afe681b0f [INFO] checking inc0/sdf-utils against 1.95.0-beta.7 for beta-1.95-4 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Finc0%2Fsdf-utils" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/inc0/sdf-utils [INFO] finished tweaking git repo https://github.com/inc0/sdf-utils [INFO] tweaked toml for git repo https://github.com/inc0/sdf-utils written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/inc0/sdf-utils on toolchain 1.95.0-beta.7 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0-beta.7" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/inc0/sdf-utils already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.95.0-beta.7" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0-beta.7" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1176900fd16cbf5493a15e3597ef3431a48f9875a655829e76fdd4a52fc758b5 [INFO] running `Command { std: "docker" "start" "-a" "1176900fd16cbf5493a15e3597ef3431a48f9875a655829e76fdd4a52fc758b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1176900fd16cbf5493a15e3597ef3431a48f9875a655829e76fdd4a52fc758b5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1176900fd16cbf5493a15e3597ef3431a48f9875a655829e76fdd4a52fc758b5", kill_on_drop: false }` [INFO] [stdout] 1176900fd16cbf5493a15e3597ef3431a48f9875a655829e76fdd4a52fc758b5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.95.0-beta.7" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7bd1fccf6838f015404bd7bc57f67d731318f586ddddaa2ed5bd822ec6461d63 [INFO] running `Command { std: "docker" "start" "-a" "7bd1fccf6838f015404bd7bc57f67d731318f586ddddaa2ed5bd822ec6461d63", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.149 [INFO] [stderr] Checking clap_lex v0.5.1 [INFO] [stderr] Compiling syn v2.0.38 [INFO] [stderr] Checking clap_builder v4.4.6 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling chemfiles-sys v0.10.40 [INFO] [stderr] Compiling clap_derive v4.4.2 [INFO] [stderr] Checking clap v4.4.6 [INFO] [stderr] error: failed to run custom build command for `chemfiles-sys v0.10.40` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/chemfiles-sys-91560fd4d60baa35/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build" && CMAKE_PREFIX_PATH="" "cmake" "/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/." "-DCHEMFILES_VERSION=0.10.4" "-DCHFL_RUST_PREBUILT_TARGET=x86_64-linux-gnu" "-DCHFL_RUST_PREBUILT_SHA256=2ac97eba5b79f8051cd86184e00379271c72e85d2bbcbcd50626b0ec602a1978" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug" [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- trying to download https://github.com/chemfiles/chemfiles-prebuilt/releases/download/v0.10.4/chemfiles-static.v0.10.4.x86_64-linux-gnu.tar.gz [INFO] [stderr] -- failed to download prebuilt chemfiles, building from sources [INFO] [stderr] -- The C compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc - skipped [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] -- Unpacking zlib sources [INFO] [stderr] -- Unpacking lzma sources [INFO] [stderr] -- Unpacking bzip2 sources [INFO] [stderr] -- Unpacking fmt sources [INFO] [stderr] -- Unpacking toml11 sources [INFO] [stderr] -- Unpacking tng sources [INFO] [stderr] -- Unpacking molfiles sources [INFO] [stderr] -- Unpacking mmtf-cpp sources [INFO] [stderr] -- Unpacking pugixml sources [INFO] [stderr] -- Unpacking gemmi sources [INFO] [stderr] -- Configuring done (50.5s) [INFO] [stderr] -- Generating done (0.1s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build" && MAKEFLAGS="-j --jobserver-fds=8,9 --jobserver-auth=8,9" "cmake" "--build" "." "--target" "install" "--config" "Debug" [INFO] [stderr] [ 1%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Atom.cpp.o [INFO] [stderr] [ 2%] Building CXX object chemfiles/external/CMakeFiles/pugixml.dir/pugixml/src/pugixml.cpp.o [INFO] [stderr] [ 2%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwlzh.c.o [INFO] [stderr] [ 3%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/check.c.o [INFO] [stderr] [ 4%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/adler32.c.o [INFO] [stderr] [ 4%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Configuration.cpp.o [INFO] [stderr] [ 3%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/blocksort.c.o [INFO] [stderr] [ 5%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/gromacsplugin.cxx.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/bwt.c.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/compress.c.o [INFO] [stderr] [ 6%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/coder.c.o [INFO] [stderr] [ 7%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/crc32.c.o [INFO] [stderr] [ 7%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/deflate.c.o [INFO] [stderr] [ 7%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc32_fast.c.o [INFO] [stderr] [ 8%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/huffman.c.o [INFO] [stderr] [ 8%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/crctable.c.o [INFO] [stderr] [ 9%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/randtable.c.o [INFO] [stderr] [ 10%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/gzclose.c.o [INFO] [stderr] [ 11%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc32_table.c.o [INFO] [stderr] [ 11%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/compress.c.o [INFO] [stderr] [ 12%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/dict.c.o [INFO] [stderr] [ 13%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/moldenplugin.c.o [INFO] [stderr] [ 12%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc64_fast.c.o [INFO] [stderr] [ 13%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/fixpoint.c.o [INFO] [stderr] [ 14%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/gzlib.c.o [INFO] [stderr] [ 15%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/huffman.c.o [INFO] [stderr] [ 16%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/decompress.c.o [INFO] [stderr] [ 17%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/crc64_table.c.o [INFO] [stderr] [ 18%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/check/sha256.c.o [INFO] [stderr] [ 18%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/psfplugin.c.o [INFO] [stderr] [ 18%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/gzread.c.o [INFO] [stderr] [ 19%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/huffmem.c.o [INFO] [stderr] [ 20%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/gzwrite.c.o [INFO] [stderr] [ 20%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/bzlib.c.o [INFO] [stderr] [ 20%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/alone_decoder.c.o [INFO] [stderr] [ 21%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/alone_encoder.c.o [INFO] [stderr] [ 21%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/lz77.c.o [INFO] [stderr] [ 21%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/auto_decoder.c.o [INFO] [stderr] [ 22%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/merge_sort.c.o [INFO] [stderr] [ 23%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_buffer_decoder.c.o [INFO] [stderr] [ 23%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/mtf.c.o [INFO] [stderr] [ 23%] Built target bzip2 [INFO] [stderr] [ 23%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/inflate.c.o [INFO] [stderr] [ 23%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_buffer_encoder.c.o [INFO] [stderr] [ 24%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/fmt/CMakeFiles/fmt.dir/src/format.cc.o [INFO] [stderr] [ 24%] Built target molfiles [INFO] [stderr] [ 25%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/rle.c.o [INFO] [stderr] [ 25%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/fmt/CMakeFiles/fmt.dir/src/os.cc.o [INFO] [stderr] [ 25%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/tng_compress.c.o [INFO] [stderr] [ 26%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_decoder.c.o [INFO] [stderr] [ 27%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/infback.c.o [INFO] [stderr] [ 27%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_encoder.c.o [INFO] [stderr] [ 27%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/inftrees.c.o [INFO] [stderr] [ 28%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_header_decoder.c.o [INFO] [stderr] [ 29%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/vals16.c.o [INFO] [stderr] [ 30%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_header_encoder.c.o [INFO] [stderr] [ 31%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/inffast.c.o [INFO] [stderr] [ 31%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/warnmalloc.c.o [INFO] [stderr] [ 31%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/block_util.c.o [INFO] [stderr] [ 31%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/trees.c.o [INFO] [stderr] [ 32%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/common.c.o [INFO] [stderr] [ 32%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/easy_buffer_encoder.c.o [INFO] [stderr] [ 33%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/widemuldiv.c.o [INFO] [stderr] [ 34%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/easy_decoder_memusage.c.o [INFO] [stderr] [ 35%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Connectivity.cpp.o [INFO] [stderr] [ 35%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/easy_encoder.c.o [INFO] [stderr] [ 36%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/xtc2.c.o [INFO] [stderr] [ 37%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/uncompr.c.o [INFO] [stderr] [ 38%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/easy_encoder_memusage.c.o [INFO] [stderr] [ 39%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeFiles/zlib.dir/zutil.c.o [INFO] [stderr] [ 39%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/easy_preset.c.o [INFO] [stderr] [ 39%] Built target zlib [INFO] [stderr] [ 40%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_buffer_decoder.c.o [INFO] [stderr] [ 41%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_buffer_encoder.c.o [INFO] [stderr] [ 41%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/compression/xtc3.c.o [INFO] [stderr] [ 41%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/File.cpp.o [INFO] [stderr] [ 41%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_common.c.o [INFO] [stderr] [ 42%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_decoder.c.o [INFO] [stderr] [ 42%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_encoder.c.o [INFO] [stderr] [ 43%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_flags_decoder.c.o [INFO] [stderr] [ 43%] Built target pugixml [INFO] [stderr] [ 43%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/filter_flags_encoder.c.o [INFO] [stderr] [ 44%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/lib/tng_io.c.o [INFO] [stderr] [ 45%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Format.cpp.o [INFO] [stderr] [ 45%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeFiles/tng_io.dir/src/lib/md5.c.o [INFO] [stderr] [ 46%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/index.c.o [INFO] [stderr] [ 46%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/FormatFactory.cpp.o [INFO] [stderr] [ 46%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/index_decoder.c.o [INFO] [stderr] [ 47%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/index_encoder.c.o [INFO] [stderr] [ 48%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/index_hash.c.o [INFO] [stderr] [ 48%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_buffer_decoder.c.o [INFO] [stderr] [ 49%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_buffer_encoder.c.o [INFO] [stderr] [ 49%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_decoder.c.o [INFO] [stderr] [ 50%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_encoder.c.o [INFO] [stderr] [ 50%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_flags_common.c.o [INFO] [stderr] [ 51%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_flags_decoder.c.o [INFO] [stderr] [ 51%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/stream_flags_encoder.c.o [INFO] [stderr] [ 52%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/vli_decoder.c.o [INFO] [stderr] [ 53%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/vli_encoder.c.o [INFO] [stderr] [ 53%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/common/vli_size.c.o [INFO] [stderr] [ 54%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/delta/delta_common.c.o [INFO] [stderr] [ 54%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/delta/delta_decoder.c.o [INFO] [stderr] [ 54%] Built target tng_io [INFO] [stderr] [ 55%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/FormatMetadata.cpp.o [INFO] [stderr] [ 56%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/delta/delta_encoder.c.o [INFO] [stderr] [ 56%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lz/lz_decoder.c.o [INFO] [stderr] [ 57%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lz/lz_encoder.c.o [INFO] [stderr] [ 57%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lz/lz_encoder_mf.c.o [INFO] [stderr] [ 58%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/fastpos_table.c.o [INFO] [stderr] [ 59%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma2_decoder.c.o [INFO] [stderr] [ 59%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma2_encoder.c.o [INFO] [stderr] [ 60%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma_decoder.c.o [INFO] [stderr] [ 60%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma_encoder.c.o [INFO] [stderr] [ 61%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma_encoder_optimum_fast.c.o [INFO] [stderr] [ 61%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma_encoder_optimum_normal.c.o [INFO] [stderr] [ 61%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Frame.cpp.o [INFO] [stderr] [ 62%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/lzma/lzma_encoder_presets.c.o [INFO] [stderr] [ 62%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/rangecoder/price_table.c.o [INFO] [stderr] [ 63%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/arm.c.o [INFO] [stderr] [ 64%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Property.cpp.o [INFO] [stderr] [ 65%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/armthumb.c.o [INFO] [stderr] [ 65%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/ia64.c.o [INFO] [stderr] [ 66%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Residue.cpp.o [INFO] [stderr] [ 67%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/powerpc.c.o [INFO] [stderr] [ 67%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/simple_coder.c.o [INFO] [stderr] [ 68%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/simple_decoder.c.o [INFO] [stderr] [ 68%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/simple_encoder.c.o [INFO] [stderr] [ 69%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/sparc.c.o [INFO] [stderr] [ 69%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeFiles/lzma.dir/liblzma/simple/x86.c.o [INFO] [stderr] [ 69%] Built target lzma [INFO] [stderr] [ 69%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Selection.cpp.o [INFO] [stderr] [ 69%] Built target fmt [INFO] [stderr] [ 70%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Topology.cpp.o [INFO] [stderr] [ 70%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/Trajectory.cpp.o [INFO] [stderr] [ 71%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/UnitCell.cpp.o [INFO] [stderr] [ 71%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/atom.cpp.o [INFO] [stderr] [ 72%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/cell.cpp.o [INFO] [stderr] [ 72%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/frame.cpp.o [INFO] [stderr] [ 73%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/misc.cpp.o [INFO] [stderr] [ 74%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/property.cpp.o [INFO] [stderr] [ 74%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/residue.cpp.o [INFO] [stderr] [ 75%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/selection.cpp.o [INFO] [stderr] [ 75%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/shared_allocator.cpp.o [INFO] [stderr] [ 76%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/topology.cpp.o [INFO] [stderr] [ 76%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/capi/trajectory.cpp.o [INFO] [stderr] [ 77%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/BinaryFile.cpp.o [INFO] [stderr] [ 77%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/Bz2File.cpp.o [INFO] [stderr] [ 78%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/GzFile.cpp.o [INFO] [stderr] [ 79%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/MemoryBuffer.cpp.o [INFO] [stderr] [ 79%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/MemoryFile.cpp.o [INFO] [stderr] [ 80%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/Netcdf3File.cpp.o [INFO] [stderr] [ 80%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/PlainFile.cpp.o [INFO] [stderr] [ 81%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/TNGFile.cpp.o [INFO] [stderr] [ 81%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/XDRFile.cpp.o [INFO] [stderr] [ 82%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/files/XzFile.cpp.o [INFO] [stderr] [ 82%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/AmberNetCDF.cpp.o [INFO] [stderr] [ 83%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CIF.cpp.o [INFO] [stderr] [ 84%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CML.cpp.o [INFO] [stderr] [ 84%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CSSR.cpp.o [INFO] [stderr] [ 85%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/DCD.cpp.o [INFO] [stderr] [ 85%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/GRO.cpp.o [INFO] [stderr] [ 86%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/LAMMPSData.cpp.o [INFO] [stderr] [ 86%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/LAMMPSTrajectory.cpp.o [INFO] [stderr] [ 87%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/MMTF.cpp.o [INFO] [stderr] [ 87%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/MOL2.cpp.o [INFO] [stderr] [ 88%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/Molfile.cpp.o [INFO] [stderr] [ 89%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/PDB.cpp.o [INFO] [stderr] [ 89%] Building CXX object chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/SDF.cpp.o [INFO] [stderr] [INFO] [stderr] --- stderr [INFO] [stderr] CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at chemfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at chemfiles/CMakeLists.txt:35 (option): [INFO] [stderr] Policy CMP0077 is not set: option() honors normal variables. Run "cmake [INFO] [stderr] --help-policy CMP0077" for policy details. Use the cmake_policy command to [INFO] [stderr] set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] For compatibility with older versions of CMake, option is clearing the [INFO] [stderr] normal variable 'BUILD_SHARED_LIBS'. [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/zlib/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/lzma/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/bzip2/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/fmt/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/tng/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-a144074bc855a363/out/build/chemfiles/external/molfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning: [INFO] [stderr] Manually-specified variables were not used by the project: [INFO] [stderr] [INFO] [stderr] CMAKE_ASM_COMPILER [INFO] [stderr] CMAKE_ASM_FLAGS [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] In file included from /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/chemfiles/src/FormatFactory.cpp:40: [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/chemfiles/include/chemfiles/formats/SMI.hpp: In constructor 'chemfiles::SMIFormat::SMIFormat(const std::string&, chemfiles::File::Mode, chemfiles::File::Compression)': [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/chemfiles/include/chemfiles/formats/SMI.hpp:35:29: warning: redundant move in initialization [-Wredundant-move] [INFO] [stderr] 35 | TextFormat(std::move(path), mode, compression) {} [INFO] [stderr] | ~~~~~~~~~^~~~~~ [INFO] [stderr] /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.40/chemfiles/include/chemfiles/formats/SMI.hpp:35:29: note: remove 'std::move' call [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:566: chemfiles/CMakeFiles/chemfiles_objects.dir/src/formats/CIF.cpp.o] Error 1 [INFO] [stderr] gmake[2]: *** Waiting for unfinished jobs.... [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:214: chemfiles/CMakeFiles/chemfiles_objects.dir/all] Error 2 [INFO] [stderr] gmake: *** [Makefile:136: all] Error 2 [INFO] [stderr] [INFO] [stderr] thread 'main' (121) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.50/src/lib.rs:1098:5: [INFO] [stderr] [INFO] [stderr] command did not execute successfully, got: exit status: 2 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x581ec9468eea - std[2bf2fe0f5e2b469a]::backtrace_rs::backtrace::libunwind::trace [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x581ec9468eea - std[2bf2fe0f5e2b469a]::backtrace_rs::backtrace::trace_unsynchronized:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x581ec9468eea - std[2bf2fe0f5e2b469a]::sys::backtrace::_print_fmt [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/sys/backtrace.rs:74:9 [INFO] [stderr] 3: 0x581ec9468eea - <::print::DisplayBacktrace as core[bd7107ce196a68c2]::fmt::Display>::fmt [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/sys/backtrace.rs:44:26 [INFO] [stderr] 4: 0x581ec947d0fa - ::fmt [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/core/src/fmt/rt.rs:152:76 [INFO] [stderr] 5: 0x581ec947d0fa - core[bd7107ce196a68c2]::fmt::write [INFO] [stderr] 6: 0x581ec946eed2 - std[2bf2fe0f5e2b469a]::io::default_write_fmt:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x581ec946eed2 - ::write_fmt [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/io/mod.rs:1994:13 [INFO] [stderr] 8: 0x581ec944a1ef - ::print [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/sys/backtrace.rs:47:9 [INFO] [stderr] 9: 0x581ec944a1ef - std[2bf2fe0f5e2b469a]::panicking::default_hook::{closure#0} [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:292:27 [INFO] [stderr] 10: 0x581ec94635e1 - std[2bf2fe0f5e2b469a]::panicking::default_hook [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:319:9 [INFO] [stderr] 11: 0x581ec946379b - std[2bf2fe0f5e2b469a]::panicking::panic_with_hook [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:825:13 [INFO] [stderr] 12: 0x581ec944a2a8 - std[2bf2fe0f5e2b469a]::panicking::panic_handler::{closure#0} [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:698:13 [INFO] [stderr] 13: 0x581ec943f3a9 - std[2bf2fe0f5e2b469a]::sys::backtrace::__rust_end_short_backtrace:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/sys/backtrace.rs:182:18 [INFO] [stderr] 14: 0x581ec944ac0d - __rustc[8d4a95d2a951f29f]::rust_begin_unwind [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:689:5 [INFO] [stderr] 15: 0x581ec947d94c - core[bd7107ce196a68c2]::panicking::panic_fmt [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/core/src/panicking.rs:80:14 [INFO] [stderr] 16: 0x581ec93ea697 - cmake::fail::h9669d0b94f8fc826 [INFO] [stderr] 17: 0x581ec93ea351 - cmake::run::h2492f6f5a68aafa9 [INFO] [stderr] 18: 0x581ec93f0400 - cmake::Config::build::hf463d6d3dbc8807a [INFO] [stderr] 19: 0x581ec93dd97f - build_script_build::build_chemfiles::hbdaaac401d92ebe0 [INFO] [stderr] 20: 0x581ec93ddc13 - build_script_build::main::h9d2c5509383199f1 [INFO] [stderr] 21: 0x581ec93de7a3 - core::ops::function::FnOnce::call_once::h14b41bc4f195fd2e [INFO] [stderr] 22: 0x581ec93de6d6 - std::sys::backtrace::__rust_begin_short_backtrace::h0281826bfdc1f4ee [INFO] [stderr] 23: 0x581ec93de659 - std::rt::lang_start::{{closure}}::he7d61860bc0a11f2 [INFO] [stderr] 24: 0x581ec94626d4 - <&dyn core[bd7107ce196a68c2]::ops::function::Fn<(), Output = i32> + core[bd7107ce196a68c2]::marker::Sync + core[bd7107ce196a68c2]::panic::unwind_safe::RefUnwindSafe as core[bd7107ce196a68c2]::ops::function::FnOnce<()>>::call_once [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/core/src/ops/function.rs:287:21 [INFO] [stderr] 25: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panicking::catch_unwind::do_call::<&dyn core[bd7107ce196a68c2]::ops::function::Fn<(), Output = i32> + core[bd7107ce196a68c2]::marker::Sync + core[bd7107ce196a68c2]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:581:40 [INFO] [stderr] 26: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panicking::catch_unwind:: + core[bd7107ce196a68c2]::marker::Sync + core[bd7107ce196a68c2]::panic::unwind_safe::RefUnwindSafe> [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:544:19 [INFO] [stderr] 27: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panic::catch_unwind::<&dyn core[bd7107ce196a68c2]::ops::function::Fn<(), Output = i32> + core[bd7107ce196a68c2]::marker::Sync + core[bd7107ce196a68c2]::panic::unwind_safe::RefUnwindSafe, i32> [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panic.rs:359:14 [INFO] [stderr] 28: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::rt::lang_start_internal::{closure#0} [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/rt.rs:175:24 [INFO] [stderr] 29: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panicking::catch_unwind::do_call:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:581:40 [INFO] [stderr] 30: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panicking::catch_unwind:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panicking.rs:544:19 [INFO] [stderr] 31: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::panic::catch_unwind:: [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/panic.rs:359:14 [INFO] [stderr] 32: 0x581ec94626d4 - std[2bf2fe0f5e2b469a]::rt::lang_start_internal [INFO] [stderr] at /rustc/cc969f3c457b2ce350fb9fda6c784cc9813b5c71/library/std/src/rt.rs:171:5 [INFO] [stderr] 33: 0x581ec93de641 - std::rt::lang_start::h822b455c1d0513a9 [INFO] [stderr] 34: 0x581ec93e0285 - main [INFO] [stderr] 35: 0x795844e391ca - [INFO] [stderr] 36: 0x795844e3928b - __libc_start_main [INFO] [stderr] 37: 0x581ec93dcdf5 - _start [INFO] [stderr] 38: 0x0 - [INFO] running `Command { std: "docker" "inspect" "7bd1fccf6838f015404bd7bc57f67d731318f586ddddaa2ed5bd822ec6461d63", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7bd1fccf6838f015404bd7bc57f67d731318f586ddddaa2ed5bd822ec6461d63", kill_on_drop: false }` [INFO] [stdout] 7bd1fccf6838f015404bd7bc57f67d731318f586ddddaa2ed5bd822ec6461d63