[INFO] cloning repository https://github.com/alvgeppetto/loom [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/alvgeppetto/loom" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 62f111d1ff71bfb21bbf1aa1ffb8142c17571d0a [INFO] checking alvgeppetto/loom/62f111d1ff71bfb21bbf1aa1ffb8142c17571d0a against 1.94.0 for beta-1.95-4 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falvgeppetto%2Floom" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-1-tc1/source/.cargo/config.toml [INFO] started tweaking git repo https://github.com/alvgeppetto/loom [INFO] finished tweaking git repo https://github.com/alvgeppetto/loom [INFO] tweaked toml for git repo https://github.com/alvgeppetto/loom written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/alvgeppetto/loom on toolchain 1.94.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.94.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/alvgeppetto/loom already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.94.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fm-index v0.2.0 [INFO] [stderr] Downloaded vers-vecs v1.9.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.94.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 80b96b5fe313b434fd885027ef8956d937cf7e316a2f039d9244a78e312ecb9e [INFO] running `Command { std: "docker" "start" "-a" "80b96b5fe313b434fd885027ef8956d937cf7e316a2f039d9244a78e312ecb9e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "80b96b5fe313b434fd885027ef8956d937cf7e316a2f039d9244a78e312ecb9e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80b96b5fe313b434fd885027ef8956d937cf7e316a2f039d9244a78e312ecb9e", kill_on_drop: false }` [INFO] [stdout] 80b96b5fe313b434fd885027ef8956d937cf7e316a2f039d9244a78e312ecb9e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+1.94.0" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1cd323bcf58358fbccb349d243aed38d6351d4ae06396ad47ee85b93bd37c25d [INFO] running `Command { std: "docker" "start" "-a" "1cd323bcf58358fbccb349d243aed38d6351d4ae06396ad47ee85b93bd37c25d", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.44 [INFO] [stderr] Compiling libc v0.2.182 [INFO] [stderr] Checking subtle v2.6.1 [INFO] [stderr] Compiling serde_core v1.0.228 [INFO] [stderr] Compiling serde v1.0.228 [INFO] [stderr] Compiling wasm-bindgen-shared v0.2.113 [INFO] [stderr] Checking litemap v0.8.1 [INFO] [stderr] Compiling cc v1.2.56 [INFO] [stderr] Checking writeable v0.6.2 [INFO] [stderr] Checking smallvec v1.15.1 [INFO] [stderr] Compiling zerocopy v0.8.40 [INFO] [stderr] Compiling icu_properties_data v2.1.2 [INFO] [stderr] Compiling icu_normalizer_data v2.1.1 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling heapless v0.7.17 [INFO] [stderr] Checking simd-adler32 v0.3.8 [INFO] [stderr] Compiling bumpalo v3.20.2 [INFO] [stderr] Compiling getrandom v0.4.1 [INFO] [stderr] Checking itoa v1.0.17 [INFO] [stderr] Compiling rustix v1.1.4 [INFO] [stderr] Checking hash32 v0.2.1 [INFO] [stderr] Checking miniz_oxide v0.8.9 [INFO] [stderr] Compiling syn v2.0.117 [INFO] [stderr] Compiling wasm-bindgen v0.2.113 [INFO] [stderr] Checking spin v0.9.8 [INFO] [stderr] Checking linux-raw-sys v0.12.1 [INFO] [stderr] Checking base64ct v1.8.3 [INFO] [stderr] Checking bitflags v2.11.0 [INFO] [stderr] Checking unicode-ident v1.0.24 [INFO] [stderr] Checking anstyle-parse v0.2.7 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Checking percent-encoding v2.3.2 [INFO] [stderr] Checking colorchoice v1.0.4 [INFO] [stderr] Checking fastrand v2.3.0 [INFO] [stderr] Checking flate2 v1.1.9 [INFO] [stderr] Compiling rustls v0.23.37 [INFO] [stderr] Checking anstyle v1.0.13 [INFO] [stderr] Compiling portable-atomic v1.13.1 [INFO] [stderr] Checking form_urlencoded v1.2.2 [INFO] [stderr] Checking clap_lex v1.0.0 [INFO] [stderr] Checking unicode-width v0.2.2 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking csv-core v0.1.13 [INFO] [stderr] Checking number_prefix v0.4.0 [INFO] [stderr] Checking ryu v1.0.23 [INFO] [stderr] Checking either v1.15.0 [INFO] [stderr] Checking aho-corasick v1.1.4 [INFO] [stderr] Checking anstream v0.6.21 [INFO] [stderr] Checking chrono v0.4.44 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Checking clap_builder v4.5.60 [INFO] [stderr] Compiling ring v0.17.14 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Checking getrandom v0.2.17 [INFO] [stderr] Checking console v0.15.11 [INFO] [stderr] Checking errno v0.3.14 [INFO] [stderr] Checking parking_lot_core v0.9.12 [INFO] [stderr] Checking socket2 v0.6.2 [INFO] [stderr] Checking signal-hook-registry v1.4.8 [INFO] [stderr] Checking mio v1.1.1 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking parking_lot v0.12.5 [INFO] [stderr] Checking crypto-common v0.1.7 [INFO] [stderr] Checking password-hash v0.5.0 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking digest v0.10.7 [INFO] [stderr] Checking cipher v0.4.4 [INFO] [stderr] Checking universal-hash v0.5.1 [INFO] [stderr] Checking aead v0.5.2 [INFO] [stderr] Checking rayon v1.11.0 [INFO] [stderr] Checking indicatif v0.17.11 [INFO] [stderr] Checking blake2 v0.10.6 [INFO] [stderr] Checking hmac v0.12.1 [INFO] [stderr] Checking sha2 v0.10.9 [INFO] [stderr] Checking aes v0.8.4 [INFO] [stderr] Checking ctr v0.9.2 [INFO] [stderr] Checking polyval v0.6.2 [INFO] [stderr] Checking hkdf v0.12.4 [INFO] [stderr] Checking ghash v0.5.1 [INFO] [stderr] Checking argon2 v0.5.3 [INFO] [stderr] Checking tempfile v3.26.0 [INFO] [stderr] Checking aes-gcm v0.10.3 [INFO] [stderr] Checking serde_json v1.0.149 [INFO] [stderr] Checking csv v1.4.0 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling wasm-bindgen-macro-support v0.2.113 [INFO] [stderr] Checking rustls-webpki v0.103.9 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.8.1 [INFO] [stderr] Compiling zerovec-derive v0.11.2 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling thiserror-impl v2.0.18 [INFO] [stderr] Compiling clap_derive v4.5.55 [INFO] [stderr] Compiling tokio-macros v2.6.0 [INFO] [stderr] Checking tokio v1.49.0 [INFO] [stderr] Checking zerofrom v0.1.6 [INFO] [stderr] Checking yoke v0.8.1 [INFO] [stderr] Checking thiserror v2.0.18 [INFO] [stderr] Checking cobs v0.3.0 [INFO] [stderr] Checking zerovec v0.11.5 [INFO] [stderr] Checking zerotrie v0.2.3 [INFO] [stderr] Checking clap v4.5.60 [INFO] [stderr] Checking tinystr v0.8.2 [INFO] [stderr] Checking potential_utf v0.1.4 [INFO] [stderr] Checking icu_collections v2.1.1 [INFO] [stderr] Checking icu_locale_core v2.1.1 [INFO] [stderr] Compiling wasm-bindgen-macro v0.2.113 [INFO] [stderr] Checking icu_provider v2.1.1 [INFO] [stderr] Checking vers-vecs v1.9.0 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking icu_properties v2.1.2 [INFO] [stderr] Checking icu_normalizer v2.1.1 [INFO] [stderr] Checking postcard v1.1.3 [INFO] [stderr] Checking js-sys v0.3.90 [INFO] [stderr] Checking fm-index v0.2.0 [INFO] [stderr] Checking brenda v0.1.0 (/opt/rustwide/workdir/brenda) [INFO] [stderr] Checking idna_adapter v1.2.1 [INFO] [stderr] Checking idna v1.1.0 [INFO] [stderr] Checking url v2.5.8 [INFO] [stderr] Checking ureq v2.12.1 [INFO] [stderr] Checking serde-wasm-bindgen v0.6.5 [INFO] [stderr] Checking loom v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: field `novelty_score` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 26 | struct NovelRegion { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 31 | novelty_score: f64, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `total_guides` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 36 | struct PublishedDb { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] 37 | total_guides: usize, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stdout] --> src/dna/guide_novelty.rs:48:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct PublishedGuide { [INFO] [stdout] | -------------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 48 | pmid: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 49 | #[serde(default)] [INFO] [stdout] 50 | gene: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 51 | #[serde(default)] [INFO] [stdout] 52 | wuhan_hu1_pos: Option, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] 53 | length: usize, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stdout] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stdout] | [INFO] [stdout] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct OntologyPathogen { [INFO] [stdout] | ---------------- fields in this struct [INFO] [stdout] 43 | species: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 44 | genes: Option, [INFO] [stdout] 45 | disease_ontology: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] 46 | taxonomy: Option, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 50 | struct OntologyGenes { [INFO] [stdout] | ------------- fields in this struct [INFO] [stdout] 51 | reference_accession: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 52 | gene_count: Option, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `gene_id` and `gene_type` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stdout] | [INFO] [stdout] 57 | struct OntologyGene { [INFO] [stdout] | ------------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 60 | gene_id: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 61 | #[serde(rename = "type")] [INFO] [stdout] 62 | gene_type: Option, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `name` and `synonyms` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stdout] | [INFO] [stdout] 66 | struct DiseaseOntology { [INFO] [stdout] | --------------- fields in this struct [INFO] [stdout] 67 | name: Option, [INFO] [stdout] | ^^^^ [INFO] [stdout] 68 | synonyms: Option>, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `scientific_name` is never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stdout] | [INFO] [stdout] 72 | struct Taxonomy { [INFO] [stdout] | -------- field in this struct [INFO] [stdout] 73 | scientific_name: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `novelty_score` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:31:5 [INFO] [stdout] | [INFO] [stdout] 26 | struct NovelRegion { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] ... [INFO] [stdout] 31 | novelty_score: f64, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `NovelRegion` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `total_guides` is never read [INFO] [stdout] --> src/dna/guide_novelty.rs:37:5 [INFO] [stdout] | [INFO] [stdout] 36 | struct PublishedDb { [INFO] [stdout] | ----------- field in this struct [INFO] [stdout] 37 | total_guides: usize, [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedDb` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `pmid`, `gene`, `wuhan_hu1_pos`, and `length` are never read [INFO] [stdout] --> src/dna/guide_novelty.rs:48:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct PublishedGuide { [INFO] [stdout] | -------------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 48 | pmid: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 49 | #[serde(default)] [INFO] [stdout] 50 | gene: String, [INFO] [stdout] | ^^^^ [INFO] [stdout] 51 | #[serde(default)] [INFO] [stdout] 52 | wuhan_hu1_pos: Option, [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] 53 | length: usize, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `PublishedGuide` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `EXCLUDE_KEYS` is never used [INFO] [stdout] --> src/dna/pubmed_scan.rs:32:7 [INFO] [stdout] | [INFO] [stdout] 32 | const EXCLUDE_KEYS: &[&str] = &["human-grch38", "human", "refseq-viral"]; [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `species`, `disease_ontology`, and `taxonomy` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:43:5 [INFO] [stdout] | [INFO] [stdout] 42 | struct OntologyPathogen { [INFO] [stdout] | ---------------- fields in this struct [INFO] [stdout] 43 | species: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 44 | genes: Option, [INFO] [stdout] 45 | disease_ontology: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] 46 | taxonomy: Option, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyPathogen` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `reference_accession` and `gene_count` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:51:5 [INFO] [stdout] | [INFO] [stdout] 50 | struct OntologyGenes { [INFO] [stdout] | ------------- fields in this struct [INFO] [stdout] 51 | reference_accession: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] 52 | gene_count: Option, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGenes` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `gene_id` and `gene_type` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:60:5 [INFO] [stdout] | [INFO] [stdout] 57 | struct OntologyGene { [INFO] [stdout] | ------------ fields in this struct [INFO] [stdout] ... [INFO] [stdout] 60 | gene_id: Option, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] 61 | #[serde(rename = "type")] [INFO] [stdout] 62 | gene_type: Option, [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `OntologyGene` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `name` and `synonyms` are never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:67:5 [INFO] [stdout] | [INFO] [stdout] 66 | struct DiseaseOntology { [INFO] [stdout] | --------------- fields in this struct [INFO] [stdout] 67 | name: Option, [INFO] [stdout] | ^^^^ [INFO] [stdout] 68 | synonyms: Option>, [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `DiseaseOntology` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `scientific_name` is never read [INFO] [stdout] --> src/dna/pubmed_scan.rs:73:5 [INFO] [stdout] | [INFO] [stdout] 72 | struct Taxonomy { [INFO] [stdout] | -------- field in this struct [INFO] [stdout] 73 | scientific_name: Option, [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `Taxonomy` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 34.46s [INFO] running `Command { std: "docker" "inspect" "1cd323bcf58358fbccb349d243aed38d6351d4ae06396ad47ee85b93bd37c25d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1cd323bcf58358fbccb349d243aed38d6351d4ae06396ad47ee85b93bd37c25d", kill_on_drop: false }` [INFO] [stdout] 1cd323bcf58358fbccb349d243aed38d6351d4ae06396ad47ee85b93bd37c25d