[INFO] cloning repository https://github.com/MiguelAMeloM/rustnome
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/MiguelAMeloM/rustnome" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 82286a1b94e122f3f7a4934fd09541af4dc13480
[INFO] testing MiguelAMeloM/rustnome against beta-2026-03-05 for beta-1.95-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FMiguelAMeloM%2Frustnome" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/MiguelAMeloM/rustnome
[INFO] finished tweaking git repo https://github.com/MiguelAMeloM/rustnome
[INFO] tweaked toml for git repo https://github.com/MiguelAMeloM/rustnome written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/MiguelAMeloM/rustnome on toolchain beta-2026-03-05
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-03-05" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/MiguelAMeloM/rustnome already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-03-05" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-03-05" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 462d30fcc2354ba66c5fc723a9453e440130e0e7bcfef4667fea65b8b9093061
[INFO] running `Command { std: "docker" "start" "-a" "462d30fcc2354ba66c5fc723a9453e440130e0e7bcfef4667fea65b8b9093061", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "462d30fcc2354ba66c5fc723a9453e440130e0e7bcfef4667fea65b8b9093061", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "462d30fcc2354ba66c5fc723a9453e440130e0e7bcfef4667fea65b8b9093061", kill_on_drop: false }`
[INFO] [stdout] 462d30fcc2354ba66c5fc723a9453e440130e0e7bcfef4667fea65b8b9093061
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-03-05" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 360b47fc15ed37b25c63be71e3a5a6267a9ecfaf0090a36399af2be5cee49cdf
[INFO] running `Command { std: "docker" "start" "-a" "360b47fc15ed37b25c63be71e3a5a6267a9ecfaf0090a36399af2be5cee49cdf", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.57s
[INFO] running `Command { std: "docker" "inspect" "360b47fc15ed37b25c63be71e3a5a6267a9ecfaf0090a36399af2be5cee49cdf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "360b47fc15ed37b25c63be71e3a5a6267a9ecfaf0090a36399af2be5cee49cdf", kill_on_drop: false }`
[INFO] [stdout] 360b47fc15ed37b25c63be71e3a5a6267a9ecfaf0090a36399af2be5cee49cdf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-03-05" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 75a7c4019d127e63021244349a2ae592f6b25a984198d2dfd96dfe05e624e0bd
[INFO] running `Command { std: "docker" "start" "-a" "75a7c4019d127e63021244349a2ae592f6b25a984198d2dfd96dfe05e624e0bd", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.53s
[INFO] running `Command { std: "docker" "inspect" "75a7c4019d127e63021244349a2ae592f6b25a984198d2dfd96dfe05e624e0bd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "75a7c4019d127e63021244349a2ae592f6b25a984198d2dfd96dfe05e624e0bd", kill_on_drop: false }`
[INFO] [stdout] 75a7c4019d127e63021244349a2ae592f6b25a984198d2dfd96dfe05e624e0bd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:d429b63d4308055ea97f60fb1d3dfca48854a00942f1bd2ad806beaf015945ec" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-03-05" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] f51c33ff94ae5f2fb81c6717cc97d68fd741f68f20882f0230f155507b86b32f
[INFO] running `Command { std: "docker" "start" "-a" "f51c33ff94ae5f2fb81c6717cc97d68fd741f68f20882f0230f155507b86b32f", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rustome-58b66169e98873c9)
[INFO] [stdout] running 0 tests
[INFO] [stderr]    Doc-tests rustome
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73) ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73) stdout ----
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:31
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                               ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:40
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                                        ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:75:49
[INFO] [stdout]    |
[INFO] [stdout] 75 |     ("seq1".to_string(), vec![DNuc::A, DNuc::C, DNuc::G]),
[INFO] [stdout]    |                                                 ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:31
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                               ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:40
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                                        ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `DNuc` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:76:49
[INFO] [stdout]    |
[INFO] [stdout] 76 |     ("seq2".to_string(), vec![DNuc::A, DNuc::G, DNuc::G]),
[INFO] [stdout]    |                                                 ^^^^ use of undeclared type `DNuc`
[INFO] [stdout] 
[INFO] [stdout] error[E0433]: cannot find type `Scoring` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:78:15
[INFO] [stdout]    |
[INFO] [stdout] 78 | let scoring = Scoring::default();
[INFO] [stdout]    |               ^^^^^^^ use of undeclared type `Scoring`
[INFO] [stdout]    |
[INFO] [stdout] help: a struct with a similar name exists
[INFO] [stdout]    |
[INFO] [stdout] 78 - let scoring = Scoring::default();
[INFO] [stdout] 78 + let scoring = String::default();
[INFO] [stdout]    |
[INFO] [stdout] 
[INFO] [stdout] error[E0425]: cannot find function `create_tree` in this scope
[INFO] [stdout]   --> src/upgma/algorithm.rs:79:12
[INFO] [stdout]    |
[INFO] [stdout] 79 | let tree = create_tree(sequences, scoring);
[INFO] [stdout]    |            ^^^^^^^^^^^ not found in this scope
[INFO] [stdout] 
[INFO] [stdout] error: aborting due to 8 previous errors
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0425, E0433.
[INFO] [stdout] For more information about an error, try `rustc --explain E0425`.
[INFO] [stdout] Couldn't compile the test.
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/upgma/algorithm.rs - upgma::algorithm::create_tree (line 73)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.18s
[INFO] [stdout] 
[INFO] [stdout] all doctests ran in 0.34s; merged doctests compilation took 0.15s
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "f51c33ff94ae5f2fb81c6717cc97d68fd741f68f20882f0230f155507b86b32f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f51c33ff94ae5f2fb81c6717cc97d68fd741f68f20882f0230f155507b86b32f", kill_on_drop: false }`
[INFO] [stdout] f51c33ff94ae5f2fb81c6717cc97d68fd741f68f20882f0230f155507b86b32f
