[INFO] cloning repository https://github.com/stela2502/rust-geo-prep
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/stela2502/rust-geo-prep" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Frust-geo-prep", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Frust-geo-prep'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 05e8bd46e019aac8df31fc9698d89773edf87d6c
[INFO] testing stela2502/rust-geo-prep against beta-2026-01-20 for beta-1.94-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Frust-geo-prep" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/stela2502/rust-geo-prep
[INFO] finished tweaking git repo https://github.com/stela2502/rust-geo-prep
[INFO] tweaked toml for git repo https://github.com/stela2502/rust-geo-prep written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/stela2502/rust-geo-prep on toolchain beta-2026-01-20
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-01-20" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/stela2502/rust-geo-prep already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-01-20" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[ERROR] error running command: no output for 300 seconds
[INFO] testing stela2502/rust-geo-prep against beta-2026-01-20 for beta-1.94-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Frust-geo-prep" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/stela2502/rust-geo-prep
[INFO] finished tweaking git repo https://github.com/stela2502/rust-geo-prep
[INFO] tweaked toml for git repo https://github.com/stela2502/rust-geo-prep written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/stela2502/rust-geo-prep on toolchain beta-2026-01-20
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-01-20" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/stela2502/rust-geo-prep already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2026-01-20" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded textwrap v0.16.2
[INFO] [stderr]   Downloaded os_str_bytes v6.6.1
[INFO] [stderr]   Downloaded assert_cmd v2.1.2
[INFO] [stderr]   Downloaded bzip2 v0.6.1
[INFO] [stderr]   Downloaded deflate64 v0.1.10
[INFO] [stderr]   Downloaded flate2 v1.1.8
[INFO] [stderr]   Downloaded lzma-rust2 v0.15.6
[INFO] [stderr]   Downloaded zip v7.0.0
[INFO] [stderr]   Downloaded bstr v1.12.1
[INFO] [stderr]   Downloaded ppmd-rust v1.3.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-01-20" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 1b3a7d760215c152b88db9469f3f5bc263d963f791c5dddbf13d62891d97bbde
[INFO] running `Command { std: "docker" "start" "-a" "1b3a7d760215c152b88db9469f3f5bc263d963f791c5dddbf13d62891d97bbde", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "1b3a7d760215c152b88db9469f3f5bc263d963f791c5dddbf13d62891d97bbde", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1b3a7d760215c152b88db9469f3f5bc263d963f791c5dddbf13d62891d97bbde", kill_on_drop: false }`
[INFO] [stdout] 1b3a7d760215c152b88db9469f3f5bc263d963f791c5dddbf13d62891d97bbde
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-01-20" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 12e275544ab8da9e03cc7f0d8c7ef03e9d0e2de0edcefec1450456eeb94d9fe7
[INFO] running `Command { std: "docker" "start" "-a" "12e275544ab8da9e03cc7f0d8c7ef03e9d0e2de0edcefec1450456eeb94d9fe7", kill_on_drop: false }`
[INFO] [stderr]    Compiling typenum v1.19.0
[INFO] [stderr]    Compiling find-msvc-tools v0.1.7
[INFO] [stderr]    Compiling libc v0.2.171
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling syn v2.0.114
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling deranged v0.5.5
[INFO] [stderr]    Compiling bumpalo v3.19.1
[INFO] [stderr]    Compiling log v0.4.29
[INFO] [stderr]    Compiling os_str_bytes v6.6.1
[INFO] [stderr]    Compiling libbz2-rs-sys v0.2.2
[INFO] [stderr]    Compiling zlib-rs v0.5.5
[INFO] [stderr]    Compiling hashbrown v0.16.1
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling generic-array v0.14.7
[INFO] [stderr]    Compiling cc v1.2.52
[INFO] [stderr]    Compiling simd-adler32 v0.3.8
[INFO] [stderr]    Compiling indexmap v2.13.0
[INFO] [stderr]    Compiling time v0.3.44
[INFO] [stderr]    Compiling zopfli v0.8.3
[INFO] [stderr]    Compiling crypto-common v0.1.7
[INFO] [stderr]    Compiling block-buffer v0.10.4
[INFO] [stderr]    Compiling digest v0.10.7
[INFO] [stderr]    Compiling inout v0.1.4
[INFO] [stderr]    Compiling cipher v0.4.4
[INFO] [stderr]    Compiling hmac v0.12.1
[INFO] [stderr]    Compiling sha2 v0.10.9
[INFO] [stderr]    Compiling aes v0.8.4
[INFO] [stderr]    Compiling pbkdf2 v0.12.2
[INFO] [stderr]    Compiling sha1 v0.10.6
[INFO] [stderr]    Compiling lzma-rust2 v0.15.6
[INFO] [stderr]    Compiling bzip2 v0.6.1
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling textwrap v0.16.2
[INFO] [stderr]    Compiling ppmd-rust v1.3.0
[INFO] [stderr]    Compiling deflate64 v0.1.10
[INFO] [stderr]    Compiling constant_time_eq v0.3.1
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling md5 v0.7.0
[INFO] [stderr]    Compiling clap_derive v3.2.25
[INFO] [stderr]    Compiling zeroize_derive v1.4.3
[INFO] [stderr]    Compiling zeroize v1.8.2
[INFO] [stderr]    Compiling flate2 v1.1.8
[INFO] [stderr]    Compiling clap v3.2.25
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling zip v7.0.0
[INFO] [stderr]    Compiling rust-geo-prep v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 8.14s
[INFO] running `Command { std: "docker" "inspect" "12e275544ab8da9e03cc7f0d8c7ef03e9d0e2de0edcefec1450456eeb94d9fe7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "12e275544ab8da9e03cc7f0d8c7ef03e9d0e2de0edcefec1450456eeb94d9fe7", kill_on_drop: false }`
[INFO] [stdout] 12e275544ab8da9e03cc7f0d8c7ef03e9d0e2de0edcefec1450456eeb94d9fe7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-01-20" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d6d464209fab7482e0e0426e1201e0fd365961ee4a214f2cfcc14b6f923276fd
[INFO] running `Command { std: "docker" "start" "-a" "d6d464209fab7482e0e0426e1201e0fd365961ee4a214f2cfcc14b6f923276fd", kill_on_drop: false }`
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling aho-corasick v1.1.4
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling rustix v1.1.2
[INFO] [stderr]    Compiling predicates-core v1.0.9
[INFO] [stderr]    Compiling clap v3.2.25
[INFO] [stderr]    Compiling termtree v0.5.1
[INFO] [stderr]    Compiling linux-raw-sys v0.11.0
[INFO] [stderr]    Compiling cc v1.2.52
[INFO] [stderr]    Compiling normalize-line-endings v0.3.0
[INFO] [stderr]    Compiling bitflags v2.10.0
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stderr]    Compiling flate2 v1.1.8
[INFO] [stderr]    Compiling assert_cmd v2.1.2
[INFO] [stderr]    Compiling predicates-tree v1.0.12
[INFO] [stderr]    Compiling float-cmp v0.10.0
[INFO] [stderr]    Compiling wait-timeout v0.2.1
[INFO] [stderr]    Compiling regex-automata v0.4.13
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling tempfile v3.23.0
[INFO] [stderr]    Compiling regex v1.12.2
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling predicates v3.1.3
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling zip v7.0.0
[INFO] [stderr]    Compiling rust-geo-prep v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 6.78s
[INFO] running `Command { std: "docker" "inspect" "d6d464209fab7482e0e0426e1201e0fd365961ee4a214f2cfcc14b6f923276fd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d6d464209fab7482e0e0426e1201e0fd365961ee4a214f2cfcc14b6f923276fd", kill_on_drop: false }`
[INFO] [stdout] d6d464209fab7482e0e0426e1201e0fd365961ee4a214f2cfcc14b6f923276fd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:98afbf2d16093dec2546ff8915fddc74e65664aa03fc460b3712b1c2c54a33e4" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2026-01-20" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 16ab2efce4f72836086d7eaaaf1130a2ee72495dc88e8d8d897b25293747d680
[INFO] running `Command { std: "docker" "start" "-a" "16ab2efce4f72836086d7eaaaf1130a2ee72495dc88e8d8d897b25293747d680", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rust_geo_prep-d579e9a27dcd0daa)
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stdout] test sample_files::parsed_file::tests::above_outs_is_none_when_outs_not_present ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::above_outs_is_none_when_path_is_outs_itself ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::above_outs_returns_sample_name_from_file_under_triplet_dir ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::above_outs_returns_sample_name_from_triplet_dir ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::above_outs_returns_sample_name_for_raw_too ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::tenx_sample_label_filtered ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::tenx_sample_label_from_file_anchor_parent ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::tenx_sample_label_none_when_outs_missing ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::h5_geo_filename ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::tenx_sample_label_none_when_path_is_just_filtered_dir_no_context ... ok
[INFO] [stdout] test sample_files::parsed_file::tests::tenx_sample_label_raw ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/rust_geo_prep-c7834ea2768821cb)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/example_test.rs (/opt/rustwide/target/debug/deps/example_test-3cc65bab23d2b40a)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test example_tree_is_created_with_expected_files ... ok
[INFO] [stdout] test cli_runs_on_example_tree_and_creates_outputs ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests rust_geo_prep
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "16ab2efce4f72836086d7eaaaf1130a2ee72495dc88e8d8d897b25293747d680", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "16ab2efce4f72836086d7eaaaf1130a2ee72495dc88e8d8d897b25293747d680", kill_on_drop: false }`
[INFO] [stdout] 16ab2efce4f72836086d7eaaaf1130a2ee72495dc88e8d8d897b25293747d680
