[INFO] cloning repository https://github.com/Adoni5/cnv_from_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Adoni5/cnv_from_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] c537c911efb519f10579a1dab8612025edf0c1ad
[INFO] documenting Adoni5/cnv_from_bam against 1.91.0 for beta-1.92-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] finished tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] tweaked toml for git repo https://github.com/Adoni5/cnv_from_bam written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Adoni5/cnv_from_bam on toolchain 1.91.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.91.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.91.0" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 91 packages to latest Rust 1.91.0 compatible versions
[INFO] [stderr]       Adding noodles v0.99.0 (available: v0.101.0)
[INFO] [stderr]       Adding noodles-bgzf v0.41.0 (available: v0.43.0)
[INFO] [stderr]       Adding pyo3 v0.25.1 (available: v0.27.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.91.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-build-config v0.25.1
[INFO] [stderr]   Downloaded pyo3-macros v0.25.1
[INFO] [stderr]   Downloaded natord v1.0.9
[INFO] [stderr]   Downloaded indoc v2.0.7
[INFO] [stderr]   Downloaded noodles-core v0.17.0
[INFO] [stderr]   Downloaded ctrlc v3.5.1
[INFO] [stderr]   Downloaded noodles v0.99.0
[INFO] [stderr]   Downloaded libdeflater v1.25.0
[INFO] [stderr]   Downloaded block2 v0.6.2
[INFO] [stderr]   Downloaded console v0.16.1
[INFO] [stderr]   Downloaded indicatif v0.18.2
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.25.1
[INFO] [stderr]   Downloaded noodles-bam v0.81.0
[INFO] [stderr]   Downloaded noodles-sam v0.77.0
[INFO] [stderr]   Downloaded noodles-csi v0.49.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.41.0
[INFO] [stderr]   Downloaded pyo3-ffi v0.25.1
[INFO] [stderr]   Downloaded libdeflate-sys v1.25.0
[INFO] [stderr]   Downloaded objc2 v0.6.3
[INFO] [stderr]   Downloaded bstr v1.12.1
[INFO] [stderr]   Downloaded pyo3 v0.25.1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] aab5b4d0348bd14237e0e200389ac72ccc562d9d263d5b3359c357272d243f6c
[INFO] running `Command { std: "docker" "start" "-a" "aab5b4d0348bd14237e0e200389ac72ccc562d9d263d5b3359c357272d243f6c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "aab5b4d0348bd14237e0e200389ac72ccc562d9d263d5b3359c357272d243f6c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "aab5b4d0348bd14237e0e200389ac72ccc562d9d263d5b3359c357272d243f6c", kill_on_drop: false }`
[INFO] [stdout] aab5b4d0348bd14237e0e200389ac72ccc562d9d263d5b3359c357272d243f6c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 67931002ec1f1dcb89053683db6d936466215d7ecc5277b1dabb7eda4b84c06a
[INFO] running `Command { std: "docker" "start" "-a" "67931002ec1f1dcb89053683db6d936466215d7ecc5277b1dabb7eda4b84c06a", kill_on_drop: false }`
[INFO] [stderr]    Compiling target-lexicon v0.13.3
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking zlib-rs v0.5.2
[INFO] [stderr]    Compiling proc-macro2 v1.0.103
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]     Checking memchr v2.7.6
[INFO] [stderr]    Compiling unicode-ident v1.0.22
[INFO] [stderr]    Compiling cc v1.2.44
[INFO] [stderr]     Checking bitflags v2.10.0
[INFO] [stderr]     Checking smallvec v1.15.1
[INFO] [stderr]     Checking hashbrown v0.16.0
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]     Checking either v1.15.0
[INFO] [stderr]    Compiling indoc v2.0.7
[INFO] [stderr]     Checking unindent v0.2.4
[INFO] [stderr]     Checking unit-prefix v0.5.1
[INFO] [stderr]     Checking rayon v1.11.0
[INFO] [stderr]     Checking natord v1.0.9
[INFO] [stderr]     Checking log v0.4.28
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]    Compiling syn v2.0.108
[INFO] [stderr]    Compiling pyo3-build-config v0.25.1
[INFO] [stderr]     Checking noodles-core v0.17.0
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking indexmap v2.12.0
[INFO] [stderr]     Checking libz-rs-sys v0.5.2
[INFO] [stderr]     Checking flate2 v1.1.5
[INFO] [stderr]    Compiling libdeflate-sys v1.25.0
[INFO] [stderr]    Compiling pyo3-ffi v0.25.1
[INFO] [stderr]    Compiling pyo3-macros-backend v0.25.1
[INFO] [stderr]    Compiling pyo3 v0.25.1
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]     Checking once_cell v1.21.3
[INFO] [stderr]     Checking console v0.16.1
[INFO] [stderr]     Checking ctrlc v3.5.1
[INFO] [stderr]     Checking indicatif v0.18.2
[INFO] [stderr]     Checking libdeflater v1.25.0
[INFO] [stderr]     Checking noodles-bgzf v0.41.0
[INFO] [stderr]     Checking noodles-csi v0.49.0
[INFO] [stderr]     Checking noodles-sam v0.77.0
[INFO] [stderr]     Checking noodles-bam v0.81.0
[INFO] [stderr]     Checking noodles v0.99.0
[INFO] [stderr]    Compiling pyo3-macros v0.25.1
[INFO] [stderr]  Documenting cnv_from_bam v0.4.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 22.67s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/cnv_from_bam/index.html
[INFO] running `Command { std: "docker" "inspect" "67931002ec1f1dcb89053683db6d936466215d7ecc5277b1dabb7eda4b84c06a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "67931002ec1f1dcb89053683db6d936466215d7ecc5277b1dabb7eda4b84c06a", kill_on_drop: false }`
[INFO] [stdout] 67931002ec1f1dcb89053683db6d936466215d7ecc5277b1dabb7eda4b84c06a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "DOCS_RS=1" "-e" "RUSTC_BOOTSTRAP=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fd9a6899456fa7f019116b9465575553dc8e0d06e4b0aa4b5afe7b1ee224e469
[INFO] running `Command { std: "docker" "start" "-a" "fd9a6899456fa7f019116b9465575553dc8e0d06e4b0aa4b5afe7b1ee224e469", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.103
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]    Compiling syn v2.0.108
[INFO] [stderr]    Compiling pyo3-macros-backend v0.25.1
[INFO] [stderr]    Compiling pyo3-macros v0.25.1
[INFO] [stderr]     Checking pyo3 v0.25.1
[INFO] [stderr]  Documenting cnv_from_bam v0.4.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 12.38s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/cnv_from_bam/index.html
[INFO] running `Command { std: "docker" "inspect" "fd9a6899456fa7f019116b9465575553dc8e0d06e4b0aa4b5afe7b1ee224e469", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fd9a6899456fa7f019116b9465575553dc8e0d06e4b0aa4b5afe7b1ee224e469", kill_on_drop: false }`
[INFO] [stdout] fd9a6899456fa7f019116b9465575553dc8e0d06e4b0aa4b5afe7b1ee224e469
