[INFO] cloning repository https://github.com/DLBPointon/FastaManipulator
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/DLBPointon/FastaManipulator" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 68c4a636a46a91b88eb171210a04d705ffcfc2d7
[INFO] documenting DLBPointon/FastaManipulator against beta-2025-10-28 for beta-1.92-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FDLBPointon%2FFastaManipulator" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/DLBPointon/FastaManipulator
[INFO] finished tweaking git repo https://github.com/DLBPointon/FastaManipulator
[INFO] tweaked toml for git repo https://github.com/DLBPointon/FastaManipulator written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/DLBPointon/FastaManipulator on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/DLBPointon/FastaManipulator already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 798e7e8db21f134d100211ec8e40c6d5a58e6dfaeddca6faa3f358cf9a8fe773
[INFO] running `Command { std: "docker" "start" "-a" "798e7e8db21f134d100211ec8e40c6d5a58e6dfaeddca6faa3f358cf9a8fe773", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "798e7e8db21f134d100211ec8e40c6d5a58e6dfaeddca6faa3f358cf9a8fe773", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "798e7e8db21f134d100211ec8e40c6d5a58e6dfaeddca6faa3f358cf9a8fe773", kill_on_drop: false }`
[INFO] [stdout] 798e7e8db21f134d100211ec8e40c6d5a58e6dfaeddca6faa3f358cf9a8fe773
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 63f772ac97e68ca47e7d4ecd860754c3aa0d5c764546bee1df9eaf29643c5e19
[INFO] running `Command { std: "docker" "start" "-a" "63f772ac97e68ca47e7d4ecd860754c3aa0d5c764546bee1df9eaf29643c5e19", kill_on_drop: false }`
[INFO] [stderr]    Compiling toml_datetime v0.6.6
[INFO] [stderr]    Compiling cc v1.1.6
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[INFO] [stderr]     Checking io v0.0.2
[INFO] [stderr]  Documenting fasta_manipulation v0.1.5 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 40.56s
[INFO] [stderr]    Generated /opt/rustwide/target/doc/fasta_manipulation/index.html
[INFO] running `Command { std: "docker" "inspect" "63f772ac97e68ca47e7d4ecd860754c3aa0d5c764546bee1df9eaf29643c5e19", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "63f772ac97e68ca47e7d4ecd860754c3aa0d5c764546bee1df9eaf29643c5e19", kill_on_drop: false }`
[INFO] [stdout] 63f772ac97e68ca47e7d4ecd860754c3aa0d5c764546bee1df9eaf29643c5e19
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "RUSTC_BOOTSTRAP=1" "-e" "DOCS_RS=1" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "rustdoc" "--lib" "-Zrustdoc-map" "--config" "build.rustdocflags=[\"--cfg\", \"docsrs\", \"-Z\", \"unstable-options\", \"--document-private-items\"]" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d6d85edbf39697b730d12bb7fe7fb1f82d4be644e55b456460468bde42127311
[INFO] running `Command { std: "docker" "start" "-a" "d6d85edbf39697b730d12bb7fe7fb1f82d4be644e55b456460468bde42127311", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.86
[INFO] [stdout] error[E0412]: cannot find type `SourceFile` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/proc-macro2-1.0.86/src/wrapper.rs:365:26
[INFO] [stdout]     |
[INFO] [stdout] 365 |     Compiler(proc_macro::SourceFile),
[INFO] [stdout]     |                          ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing one of these structs
[INFO] [stdout]     |
[INFO] [stdout]   1 + use crate::SourceFile;
[INFO] [stdout]     |
[INFO] [stdout]   1 + use crate::fallback::SourceFile;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `SourceFile`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 365 -     Compiler(proc_macro::SourceFile),
[INFO] [stdout] 365 +     Compiler(SourceFile),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0412]: cannot find type `SourceFile` in crate `proc_macro`
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/proc-macro2-1.0.86/src/wrapper.rs:371:32
[INFO] [stdout]     |
[INFO] [stdout] 371 |     fn nightly(sf: proc_macro::SourceFile) -> Self {
[INFO] [stdout]     |                                ^^^^^^^^^^ not found in `proc_macro`
[INFO] [stdout]     |
[INFO] [stdout] help: consider importing one of these structs
[INFO] [stdout]     |
[INFO] [stdout]   1 + use crate::SourceFile;
[INFO] [stdout]     |
[INFO] [stdout]   1 + use crate::fallback::SourceFile;
[INFO] [stdout]     |
[INFO] [stdout] help: if you import `SourceFile`, refer to it directly
[INFO] [stdout]     |
[INFO] [stdout] 371 -     fn nightly(sf: proc_macro::SourceFile) -> Self {
[INFO] [stdout] 371 +     fn nightly(sf: SourceFile) -> Self {
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error[E0599]: no method named `source_file` found for reference `&proc_macro::Span` in the current scope
[INFO] [stdout]    --> /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/proc-macro2-1.0.86/src/wrapper.rs:461:56
[INFO] [stdout]     |
[INFO] [stdout] 461 |             Span::Compiler(s) => SourceFile::nightly(s.source_file()),
[INFO] [stdout]     |                                                        ^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout] help: there is a method `source` with a similar name
[INFO] [stdout]     |
[INFO] [stdout] 461 -             Span::Compiler(s) => SourceFile::nightly(s.source_file()),
[INFO] [stdout] 461 +             Span::Compiler(s) => SourceFile::nightly(s.source()),
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] Some errors have detailed explanations: E0412, E0599.
[INFO] [stdout] 
[INFO] [stdout] For more information about an error, try `rustc --explain E0412`.
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `proc-macro2` (lib) due to 3 previous errors
[INFO] running `Command { std: "docker" "inspect" "d6d85edbf39697b730d12bb7fe7fb1f82d4be644e55b456460468bde42127311", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d6d85edbf39697b730d12bb7fe7fb1f82d4be644e55b456460468bde42127311", kill_on_drop: false }`
[INFO] [stdout] d6d85edbf39697b730d12bb7fe7fb1f82d4be644e55b456460468bde42127311
