[INFO] cloning repository https://github.com/38/pyd4
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/38/pyd4" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ae36c59429e1ac7bc38bf4a4e6f3f2942bf58526
[INFO] documenting 38/pyd4 against beta-2025-10-28 for beta-1.92-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F38%2Fpyd4" "/workspace/builds/worker-4-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-4-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/38/pyd4
[INFO] finished tweaking git repo https://github.com/38/pyd4
[INFO] tweaked toml for git repo https://github.com/38/pyd4 written to /workspace/builds/worker-4-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/38/pyd4 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/38/pyd4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ae89b18bb7f56e6575fec1446d8ccca507fc23c65e38abf15afb9b633b718436
[INFO] running `Command { std: "docker" "start" "-a" "ae89b18bb7f56e6575fec1446d8ccca507fc23c65e38abf15afb9b633b718436", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ae89b18bb7f56e6575fec1446d8ccca507fc23c65e38abf15afb9b633b718436", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ae89b18bb7f56e6575fec1446d8ccca507fc23c65e38abf15afb9b633b718436", kill_on_drop: false }`
[INFO] [stdout] ae89b18bb7f56e6575fec1446d8ccca507fc23c65e38abf15afb9b633b718436
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2b12e89de031a80f3a96bc58fbce0509fe3dda14ea228da58abf69a55b7b3e0d
[INFO] running `Command { std: "docker" "start" "-a" "2b12e89de031a80f3a96bc58fbce0509fe3dda14ea228da58abf69a55b7b3e0d", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.99
[INFO] [stderr]    Compiling proc-macro2 v1.0.28
[INFO] [stderr]    Compiling syn v1.0.74
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling glob v0.3.0
[INFO] [stderr]    Compiling crossbeam-utils v0.8.5
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling proc-macro-hack v0.5.19
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling memoffset v0.6.4
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling libloading v0.7.0
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.5
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling humantime v1.3.0
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling clang-sys v1.2.0
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling bindgen v0.55.1
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling nom v5.1.2
[INFO] [stderr]    Compiling crc32fast v1.2.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling rayon-core v1.9.1
[INFO] [stderr]    Compiling serde v1.0.127
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling pkg-config v0.3.19
[INFO] [stderr]     Checking crossbeam-channel v0.5.1
[INFO] [stderr]     Checking instant v0.1.10
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]     Checking crossbeam-deque v0.8.1
[INFO] [stderr]    Compiling rayon v1.5.1
[INFO] [stderr]     Checking ppv-lite86 v0.2.10
[INFO] [stderr]    Compiling quote v1.0.9
[INFO] [stderr]    Compiling serde_json v1.0.66
[INFO] [stderr]     Checking smallvec v1.6.1
[INFO] [stderr]    Compiling inventory v0.1.10
[INFO] [stderr]    Compiling unindent v0.1.7
[INFO] [stderr]     Checking num_cpus v1.13.0
[INFO] [stderr]    Compiling serde_derive v1.0.127
[INFO] [stderr]     Checking flate2 v1.0.20
[INFO] [stderr]     Checking parking_lot_core v0.8.3
[INFO] [stderr]     Checking memmap v0.7.0
[INFO] [stderr]     Checking rand_core v0.5.1
[INFO] [stderr]    Compiling paste-impl v0.1.18
[INFO] [stderr]     Checking lock_api v0.4.4
[INFO] [stderr]     Checking itoa v0.4.7
[INFO] [stderr]    Compiling pyo3 v0.12.4
[INFO] [stderr]     Checking either v1.6.1
[INFO] [stderr]     Checking parking_lot v0.11.1
[INFO] [stderr]     Checking rand_chacha v0.2.2
[INFO] [stderr]     Checking rand v0.7.3
[INFO] [stderr]     Checking paste v0.1.18
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling env_logger v0.7.1
[INFO] [stderr]     Checking d4-framefile v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr]    Compiling pyo3-derive-backend v0.12.4
[INFO] [stderr]    Compiling ghost v0.1.2
[INFO] [stderr]    Compiling inventory-impl v0.1.10
[INFO] [stderr]    Compiling ctor v0.1.20
[INFO] [stderr]    Compiling indoc-impl v0.3.6
[INFO] [stderr]    Compiling pyo3cls v0.12.4
[INFO] [stderr]     Checking indoc v0.3.6
[INFO] [stderr]    Compiling d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)
[INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.18 (https://github.com/38/d4-format.git#fe86a8f0)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-901ac6eaeae5ce34/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr]   + pushd /opt/rustwide/target/debug/build/d4-hts-9631f0759766c4b2/out
[INFO] [stderr]   + HTSLIB_VERSION=1.11
[INFO] [stderr]   + rm -rf /opt/rustwide/target/debug/build/d4-hts-9631f0759766c4b2/out/htslib
[INFO] [stderr]   + git clone -b 1.11 https://github.com/samtools/htslib.git
[INFO] [stderr]   Cloning into 'htslib'...
[INFO] [stderr]   fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (1679) panicked at /opt/rustwide/cargo-home/git/checkouts/d4-format-aae4f10fa7ab24bd/fe86a8f/d4-hts/build.rs:34:5:
[INFO] [stderr]   assertion failed: Command::new("bash").args(&["build_htslib.sh",
[INFO] [stderr]                                           &version]).stdout(std::process::Stdio::null()).spawn().expect("Unable to build htslib").wait().unwrap().success()
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x611c8c0e5022 - std::backtrace_rs::backtrace::libunwind::trace::h16acf28769fcd909
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x611c8c0e5022 - std::backtrace_rs::backtrace::trace_unsynchronized::hb5541aa5d4f92513
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x611c8c0e5022 - std::sys::backtrace::_print_fmt::h8ac8268cb667a306
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:66:9
[INFO] [stderr]      3:     0x611c8c0e5022 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h47627beda0767f4c
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:39:26
[INFO] [stderr]      4:     0x611c8c0f61ef - core::fmt::rt::Argument::fmt::h686a01ad57c1c92a
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/rt.rs:173:76
[INFO] [stderr]      5:     0x611c8c0f61ef - core::fmt::write::h8a63064c67176fd8
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/mod.rs:1469:25
[INFO] [stderr]      6:     0x611c8c0b48f3 - std::io::default_write_fmt::hc257f38f86d39af6
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x611c8c0b48f3 - std::io::Write::write_fmt::h5e9b646cef91150b
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:1954:13
[INFO] [stderr]      8:     0x611c8c0bf682 - std::sys::backtrace::BacktraceLock::print::h4634d27c0afbaebb
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:42:9
[INFO] [stderr]      9:     0x611c8c0c237f - std::panicking::default_hook::{{closure}}::h23e0299d4738b766
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:301:27
[INFO] [stderr]     10:     0x611c8c0c21d9 - std::panicking::default_hook::hfeec6294e8751b62
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:328:9
[INFO] [stderr]     11:     0x611c8c0c2a05 - std::panicking::panic_with_hook::hd57cd463d793ed79
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:834:13
[INFO] [stderr]     12:     0x611c8c0c27b6 - std::panicking::panic_handler::{{closure}}::hddd6216c3fddee3b
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:700:13
[INFO] [stderr]     13:     0x611c8c0bf7b9 - std::sys::backtrace::__rust_end_short_backtrace::h5e7a56f283378525
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:174:18
[INFO] [stderr]     14:     0x611c8c0a911d - __rustc[256c90bb7e548b45]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:698:5
[INFO] [stderr]     15:     0x611c8c100310 - core::panicking::panic_fmt::hf19c198748ef6a95
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x611c8c1002ec - core::panicking::panic::h5387b4c27e81d0dd
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/panicking.rs:150:5
[INFO] [stderr]     17:     0x611c8bd1baf4 - build_script_build::build_own_htslib::h4448d7e32096b59f
[INFO] [stderr]     18:     0x611c8bd1c421 - build_script_build::main::h35822d4986207c45
[INFO] [stderr]     19:     0x611c8bd1d4a3 - core::ops::function::FnOnce::call_once::hf24f25e388982955
[INFO] [stderr]     20:     0x611c8bd1d186 - std::sys::backtrace::__rust_begin_short_backtrace::he48ebdad19563efe
[INFO] [stderr]     21:     0x611c8bd1d169 - std::rt::lang_start::{{closure}}::h26871efd8211d78d
[INFO] [stderr]     22:     0x611c8c0b64f0 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hdf957eac011d0136
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     23:     0x611c8c0b64f0 - std::panicking::catch_unwind::do_call::h9ff550f7799115e1
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stderr]     24:     0x611c8c0b64f0 - std::panicking::catch_unwind::ha7ce46787bb12905
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stderr]     25:     0x611c8c0b64f0 - std::panic::catch_unwind::h625b36596def7d39
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stderr]     26:     0x611c8c0b64f0 - std::rt::lang_start_internal::{{closure}}::h4cbc9430de699e2c
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:175:24
[INFO] [stderr]     27:     0x611c8c0b64f0 - std::panicking::catch_unwind::do_call::h5af2f11409a22e3e
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stderr]     28:     0x611c8c0b64f0 - std::panicking::catch_unwind::hf64cf7b0d8070f52
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stderr]     29:     0x611c8c0b64f0 - std::panic::catch_unwind::h480b74763390cdcf
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stderr]     30:     0x611c8c0b64f0 - std::rt::lang_start_internal::h4b3d04f698aef094
[INFO] [stderr]                                  at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:171:5
[INFO] [stderr]     31:     0x611c8bd1d151 - std::rt::lang_start::h44d664b0ce19b536
[INFO] [stderr]     32:     0x611c8bd1f6d5 - main
[INFO] [stderr]     33:     0x7bd8bd9011ca - <unknown>
[INFO] [stderr]     34:     0x7bd8bd90128b - __libc_start_main
[INFO] [stderr]     35:     0x611c8bd1b395 - _start
[INFO] [stderr]     36:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "2b12e89de031a80f3a96bc58fbce0509fe3dda14ea228da58abf69a55b7b3e0d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2b12e89de031a80f3a96bc58fbce0509fe3dda14ea228da58abf69a55b7b3e0d", kill_on_drop: false }`
[INFO] [stdout] 2b12e89de031a80f3a96bc58fbce0509fe3dda14ea228da58abf69a55b7b3e0d
