[INFO] fetching crate omics-variation 0.2.0...
[INFO] testing omics-variation-0.2.0 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate omics-variation 0.2.0 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate omics-variation 0.2.0
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate omics-variation 0.2.0
[INFO] tweaked toml for crates.io crate omics-variation 0.2.0 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate omics-variation 0.2.0 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate omics-variation 0.2.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 7cdb9ade405db04c96aa2d09963001442ade1e8875a4921249f50332a834d791
[INFO] running `Command { std: "docker" "start" "-a" "7cdb9ade405db04c96aa2d09963001442ade1e8875a4921249f50332a834d791", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "7cdb9ade405db04c96aa2d09963001442ade1e8875a4921249f50332a834d791", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7cdb9ade405db04c96aa2d09963001442ade1e8875a4921249f50332a834d791", kill_on_drop: false }`
[INFO] [stdout] 7cdb9ade405db04c96aa2d09963001442ade1e8875a4921249f50332a834d791
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9aa1d8db1677f5d5a1812fdaadead36d7bc932e46e9aafdfecd6de1645ad3236
[INFO] running `Command { std: "docker" "start" "-a" "9aa1d8db1677f5d5a1812fdaadead36d7bc932e46e9aafdfecd6de1645ad3236", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.92
[INFO] [stderr]    Compiling unicode-ident v1.0.14
[INFO] [stderr]    Compiling thiserror v2.0.9
[INFO] [stderr]    Compiling omics-core v0.1.0
[INFO] [stderr]    Compiling omics-molecule v0.1.0
[INFO] [stderr]    Compiling quote v1.0.38
[INFO] [stderr]    Compiling syn v2.0.93
[INFO] [stderr]    Compiling thiserror-impl v2.0.9
[INFO] [stderr]    Compiling omics-coordinate v0.2.0
[INFO] [stderr]    Compiling omics-variation v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 5.34s
[INFO] running `Command { std: "docker" "inspect" "9aa1d8db1677f5d5a1812fdaadead36d7bc932e46e9aafdfecd6de1645ad3236", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9aa1d8db1677f5d5a1812fdaadead36d7bc932e46e9aafdfecd6de1645ad3236", kill_on_drop: false }`
[INFO] [stdout] 9aa1d8db1677f5d5a1812fdaadead36d7bc932e46e9aafdfecd6de1645ad3236
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a15ea523d1595637ac204e7abdb0fb10057e9aa13e3249544bc1734055494bbb
[INFO] running `Command { std: "docker" "start" "-a" "a15ea523d1595637ac204e7abdb0fb10057e9aa13e3249544bc1734055494bbb", kill_on_drop: false }`
[INFO] [stderr]    Compiling anyhow v1.0.94
[INFO] [stderr]    Compiling omics-variation v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.18s
[INFO] running `Command { std: "docker" "inspect" "a15ea523d1595637ac204e7abdb0fb10057e9aa13e3249544bc1734055494bbb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a15ea523d1595637ac204e7abdb0fb10057e9aa13e3249544bc1734055494bbb", kill_on_drop: false }`
[INFO] [stdout] a15ea523d1595637ac204e7abdb0fb10057e9aa13e3249544bc1734055494bbb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 9671614c4db63387bc3cc4ccbe359fda46d80ec54562b08a6155be3c81634838
[INFO] running `Command { std: "docker" "start" "-a" "9671614c4db63387bc3cc4ccbe359fda46d80ec54562b08a6155be3c81634838", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.06s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_variation-74dcbad41c5dc9bc)
[INFO] [stdout] 
[INFO] [stdout] running 13 tests
[INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_rna_context ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_dna_context ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_rna_context ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_rna_context ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_empty_pair ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_insertion ... ok
[INFO] [stdout] test snv::tests::it_fails_when_creating_a_variant_with_identical_nucleotides ... ok
[INFO] [stdout] test tests::it_errors_when_attempting_to_parse_invalid_variants ... ok
[INFO] [stdout] test tests::it_parses_dna_snvs_correctly ... ok
[INFO] [stdout] test tests::it_serializes_correctly ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_dna_context ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_a_deletion ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_dna_context ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.10s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests omics_variation
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::reference (line 176) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::coordinate (line 149) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::try_new (line 109) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::alternate (line 198) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.55s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "9671614c4db63387bc3cc4ccbe359fda46d80ec54562b08a6155be3c81634838", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9671614c4db63387bc3cc4ccbe359fda46d80ec54562b08a6155be3c81634838", kill_on_drop: false }`
[INFO] [stdout] 9671614c4db63387bc3cc4ccbe359fda46d80ec54562b08a6155be3c81634838
