[INFO] fetching crate mzdeisotope 0.3.4...
[INFO] testing mzdeisotope-0.3.4 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate mzdeisotope 0.3.4 into /workspace/builds/worker-2-tc2/source
[INFO] started tweaking crates.io crate mzdeisotope 0.3.4
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate mzdeisotope 0.3.4
[INFO] tweaked toml for crates.io crate mzdeisotope 0.3.4 written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate mzdeisotope 0.3.4 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate mzdeisotope 0.3.4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 44e5da4414163c4a8fe612a66701996e0a7bd0338b9f81b052c6531f81bda156
[INFO] running `Command { std: "docker" "start" "-a" "44e5da4414163c4a8fe612a66701996e0a7bd0338b9f81b052c6531f81bda156", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "44e5da4414163c4a8fe612a66701996e0a7bd0338b9f81b052c6531f81bda156", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "44e5da4414163c4a8fe612a66701996e0a7bd0338b9f81b052c6531f81bda156", kill_on_drop: false }`
[INFO] [stdout] 44e5da4414163c4a8fe612a66701996e0a7bd0338b9f81b052c6531f81bda156
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 41f5bdfc3c8391b3310f42dbecbe4b7d7bd5f0f36e095359e9a9dd02040d3f71
[INFO] running `Command { std: "docker" "start" "-a" "41f5bdfc3c8391b3310f42dbecbe4b7d7bd5f0f36e095359e9a9dd02040d3f71", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v2.0.101
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling ident_case v1.0.1
[INFO] [stderr]    Compiling bytemuck v1.23.0
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]    Compiling vsimd v0.8.0
[INFO] [stderr]    Compiling outref v0.5.2
[INFO] [stderr]    Compiling flate2 v1.1.1
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling md5 v0.7.0
[INFO] [stderr]    Compiling identity-hash v0.1.0
[INFO] [stderr]    Compiling base16ct v0.2.0
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling wide v0.7.32
[INFO] [stderr]    Compiling base64-simd v0.8.0
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling mzpeaks v1.0.9
[INFO] [stderr]    Compiling chrono v0.4.41
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling simba v0.9.0
[INFO] [stderr]    Compiling darling_core v0.20.11
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling tracing-attributes v0.1.28
[INFO] [stderr]    Compiling tracing v0.1.41
[INFO] [stderr]    Compiling thiserror v2.0.12
[INFO] [stderr]    Compiling darling_macro v0.20.11
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]    Compiling darling v0.20.11
[INFO] [stderr]    Compiling serde_with_macros v3.12.0
[INFO] [stderr]    Compiling nalgebra v0.33.2
[INFO] [stderr]    Compiling serde_with v3.12.0
[INFO] [stderr]    Compiling quick-xml v0.30.0
[INFO] [stderr]    Compiling indexmap v2.9.0
[INFO] [stderr]    Compiling chemical_elements v0.7.0
[INFO] [stderr]    Compiling mzsignal v1.1.7
[INFO] [stderr]    Compiling mzdata v0.60.1
[INFO] [stderr]    Compiling mzdeisotope v0.3.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 48.99s
[INFO] running `Command { std: "docker" "inspect" "41f5bdfc3c8391b3310f42dbecbe4b7d7bd5f0f36e095359e9a9dd02040d3f71", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "41f5bdfc3c8391b3310f42dbecbe4b7d7bd5f0f36e095359e9a9dd02040d3f71", kill_on_drop: false }`
[INFO] [stdout] 41f5bdfc3c8391b3310f42dbecbe4b7d7bd5f0f36e095359e9a9dd02040d3f71
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e8b1d071971dfb5a2d8f29909411df5a3bb82c7352762f56bb8ecba8ff1dbcef
[INFO] running `Command { std: "docker" "start" "-a" "e8b1d071971dfb5a2d8f29909411df5a3bb82c7352762f56bb8ecba8ff1dbcef", kill_on_drop: false }`
[INFO] [stderr]    Compiling regex-syntax v0.6.29
[INFO] [stderr]    Compiling anstyle v1.0.10
[INFO] [stderr]    Compiling tracing v0.1.41
[INFO] [stderr]    Compiling anstyle-parse v0.2.6
[INFO] [stderr]    Compiling anstyle-query v1.1.2
[INFO] [stderr]    Compiling colorchoice v1.0.3
[INFO] [stderr]    Compiling mzsignal v1.1.7
[INFO] [stderr]    Compiling env_filter v0.1.3
[INFO] [stderr]    Compiling test-log-macros v0.2.17
[INFO] [stderr]    Compiling anstream v0.6.18
[INFO] [stderr]    Compiling env_logger v0.11.8
[INFO] [stderr]    Compiling mzdata v0.60.1
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling matchers v0.1.0
[INFO] [stderr]    Compiling tracing-subscriber v0.3.19
[INFO] [stderr]    Compiling test-log v0.2.17
[INFO] [stderr]    Compiling mzdeisotope v0.3.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 28.44s
[INFO] running `Command { std: "docker" "inspect" "e8b1d071971dfb5a2d8f29909411df5a3bb82c7352762f56bb8ecba8ff1dbcef", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e8b1d071971dfb5a2d8f29909411df5a3bb82c7352762f56bb8ecba8ff1dbcef", kill_on_drop: false }`
[INFO] [stdout] e8b1d071971dfb5a2d8f29909411df5a3bb82c7352762f56bb8ecba8ff1dbcef
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] c346a5a0797c6919939662364b181712ec0ca645a43faacf3b91c481de662ea3
[INFO] running `Command { std: "docker" "start" "-a" "c346a5a0797c6919939662364b181712ec0ca645a43faacf3b91c481de662ea3", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.21s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mzdeisotope-c34aba80b1821d6b)
[INFO] [stdout] 
[INFO] [stdout] running 23 tests
[INFO] [stdout] test charge::test::test_quick_charge ... FAILED
[INFO] [stdout] test deconvoluter::test::test_file_graph_step ... FAILED
[INFO] [stdout] test deconvoluter::test::test_full_process_quick_charge ... FAILED
[INFO] [stdout] test deconvoluter::test::test_full_process ... FAILED
[INFO] [stdout] test isotopic_model::test::test_fc ... ok
[INFO] [stdout] test deconvoluter::test::test_fit_all ... ok
[INFO] [stdout] test deconvoluter::test::test_builder ... ok
[INFO] [stdout] test isotopic_model::test::test_cache_key ... ok
[INFO] [stdout] test multi_model_deconvoluters::test::test_file_step ... FAILED
[INFO] [stdout] test scorer::test::test_msdeconv ... ok
[INFO] [stdout] test scorer::test::test_penalized_msdeconv ... ok
[INFO] [stdout] test isotopic_model::test::test_conversion_for_frac_composition ... ok
[INFO] [stdout] test deconvoluter::test::test_file_step ... FAILED
[INFO] [stdout] test scorer::test::test_gtest ... ok
[INFO] [stdout] test isotopic_model::test::test_isotopic_pattern_overflow ... ok
[INFO] [stdout] test scorer::test::test_scaled_gtest ... ok
[INFO] [stdout] test isotopic_model::test::test_tid_cached ... ok
[INFO] [stdout] test deconvoluter::test::test_mut ... ok
[INFO] [stdout] test isotopic_model::test::test_mz_truncation ... ok
[INFO] [stdout] test isotopic_model::test::test_tid ... ok
[INFO] [stdout] test isotopic_model::test::test_scale ... ok
[INFO] [stdout] test isotopic_model::test::test_cache ... ok
[INFO] [stdout] test isotopic_model::test::test_mono_to_base ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- charge::test::test_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_graph_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process_quick_charge stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_full_process stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- multi_model_deconvoluters::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] ---- deconvoluter::test::test_file_step stdout ----
[INFO] [stdout] Error: Os { code: 2, kind: NotFound, message: "No such file or directory" }
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     charge::test::test_quick_charge
[INFO] [stdout]     deconvoluter::test::test_file_graph_step
[INFO] [stdout]     deconvoluter::test::test_file_step
[INFO] [stdout]     deconvoluter::test::test_full_process
[INFO] [stdout]     deconvoluter::test::test_full_process_quick_charge
[INFO] [stdout]     multi_model_deconvoluters::test::test_file_step
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 17 passed; 6 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.25s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "c346a5a0797c6919939662364b181712ec0ca645a43faacf3b91c481de662ea3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c346a5a0797c6919939662364b181712ec0ca645a43faacf3b91c481de662ea3", kill_on_drop: false }`
[INFO] [stdout] c346a5a0797c6919939662364b181712ec0ca645a43faacf3b91c481de662ea3
