[INFO] fetching crate msbwt2 0.3.2...
[INFO] testing msbwt2-0.3.2 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate msbwt2 0.3.2 into /workspace/builds/worker-5-tc2/source
[INFO] started tweaking crates.io crate msbwt2 0.3.2
[INFO] finished tweaking crates.io crate msbwt2 0.3.2
[INFO] tweaked toml for crates.io crate msbwt2 0.3.2 written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate msbwt2 0.3.2 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate msbwt2 0.3.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition
[INFO] [stderr] (in the `mimalloc` dependency)
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 15a3622ee93b9930cda0deb6a2b331b240fff04aadd69790682792297e2caa25
[INFO] running `Command { std: "docker" "start" "-a" "15a3622ee93b9930cda0deb6a2b331b240fff04aadd69790682792297e2caa25", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "15a3622ee93b9930cda0deb6a2b331b240fff04aadd69790682792297e2caa25", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "15a3622ee93b9930cda0deb6a2b331b240fff04aadd69790682792297e2caa25", kill_on_drop: false }`
[INFO] [stdout] 15a3622ee93b9930cda0deb6a2b331b240fff04aadd69790682792297e2caa25
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f399040f0932fd5732ee172108be0b17b4e962dd1fe3cbb58910de57c19d0926
[INFO] running `Command { std: "docker" "start" "-a" "f399040f0932fd5732ee172108be0b17b4e962dd1fe3cbb58910de57c19d0926", kill_on_drop: false }`
[INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition
[INFO] [stderr] (in the `mimalloc` dependency)
[INFO] [stderr]    Compiling cc v1.0.78
[INFO] [stderr]    Compiling libc v0.2.139
[INFO] [stderr]    Compiling pkg-config v0.3.26
[INFO] [stderr]    Compiling indexmap v1.9.2
[INFO] [stderr]    Compiling serde v1.0.152
[INFO] [stderr]    Compiling aho-corasick v0.7.20
[INFO] [stderr]    Compiling miniz_oxide v0.6.2
[INFO] [stderr]    Compiling os_str_bytes v6.4.1
[INFO] [stderr]    Compiling regex-syntax v0.6.28
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling serde_json v1.0.91
[INFO] [stderr]    Compiling safemem v0.3.3
[INFO] [stderr]    Compiling flate2 v1.0.25
[INFO] [stderr]    Compiling buf_redux v0.8.4
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling textwrap v0.16.0
[INFO] [stderr]    Compiling itoa v1.0.5
[INFO] [stderr]    Compiling once_cell v1.17.0
[INFO] [stderr]    Compiling bytecount v0.6.3
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.30
[INFO] [stderr]    Compiling ryu v1.0.12
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling clap v3.2.23
[INFO] [stderr]    Compiling regex v1.7.1
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling exitcode v1.1.2
[INFO] [stderr]    Compiling arrayvec v0.7.2
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling needletail v0.4.1
[INFO] [stderr]    Compiling mimalloc v0.1.34
[INFO] [stderr]    Compiling env_logger v0.9.3
[INFO] [stderr]    Compiling msbwt2 v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 30.42s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 4`
[INFO] running `Command { std: "docker" "inspect" "f399040f0932fd5732ee172108be0b17b4e962dd1fe3cbb58910de57c19d0926", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f399040f0932fd5732ee172108be0b17b4e962dd1fe3cbb58910de57c19d0926", kill_on_drop: false }`
[INFO] [stdout] f399040f0932fd5732ee172108be0b17b4e962dd1fe3cbb58910de57c19d0926
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 12aaf7d17505ae3ae13f609a9b0233c6e49d9a3a1ad3a8cca1653ba7adb06f13
[INFO] running `Command { std: "docker" "start" "-a" "12aaf7d17505ae3ae13f609a9b0233c6e49d9a3a1ad3a8cca1653ba7adb06f13", kill_on_drop: false }`
[INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition
[INFO] [stderr] (in the `mimalloc` dependency)
[INFO] [stderr]    Compiling crossbeam-utils v0.8.14
[INFO] [stderr]    Compiling memoffset v0.7.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.13
[INFO] [stderr]    Compiling proc-macro2 v1.0.50
[INFO] [stderr]    Compiling quote v1.0.23
[INFO] [stderr]    Compiling unicode-ident v1.0.6
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling rayon-core v1.10.2
[INFO] [stderr]    Compiling syn v1.0.107
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling num_cpus v1.15.0
[INFO] [stderr]    Compiling serde_derive v1.0.152
[INFO] [stderr]    Compiling plotters-backend v0.3.4
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling plotters-svg v0.3.3
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling crossbeam-channel v0.5.6
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling half v1.8.2
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling serde_cbor v0.11.2
[INFO] [stderr]    Compiling plotters v0.3.4
[INFO] [stderr]    Compiling crossbeam-deque v0.8.2
[INFO] [stderr]    Compiling criterion-plot v0.4.5
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling oorandom v11.1.3
[INFO] [stderr]    Compiling fastrand v1.8.0
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling tempfile v3.3.0
[INFO] [stderr]    Compiling rayon v1.6.1
[INFO] [stderr]    Compiling criterion v0.3.6
[INFO] [stderr]    Compiling msbwt2 v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 32.42s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 4`
[INFO] running `Command { std: "docker" "inspect" "12aaf7d17505ae3ae13f609a9b0233c6e49d9a3a1ad3a8cca1653ba7adb06f13", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "12aaf7d17505ae3ae13f609a9b0233c6e49d9a3a1ad3a8cca1653ba7adb06f13", kill_on_drop: false }`
[INFO] [stdout] 12aaf7d17505ae3ae13f609a9b0233c6e49d9a3a1ad3a8cca1653ba7adb06f13
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 2e3530b4894f169ea859316d74ab730cb0e71d6f0bae19e4c9055a85774bc5cc
[INFO] running `Command { std: "docker" "start" "-a" "2e3530b4894f169ea859316d74ab730cb0e71d6f0bae19e4c9055a85774bc5cc", kill_on_drop: false }`
[INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition
[INFO] [stderr] (in the `mimalloc` dependency)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.13s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 4`
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/msbwt2-c20af51e15d6d0fe)
[INFO] [stdout] 
[INFO] [stdout] running 47 tests
[INFO] [stdout] test bwt_converter::tests::test_bwt_conversion ... ok
[INFO] [stdout] test bwt_util::tests::merging_paper_example_works ... ok
[INFO] [stdout] test bwt_converter::tests::test_newline ... ok
[INFO] [stdout] test bwt_converter::tests::test_save_bwt_runs_numpy ... ok
[INFO] [stdout] test bwt_util::tests::test_basic ... ok
[INFO] [stdout] test bwt_util::tests::merging_samples_of_different_size_example_works ... ok
[INFO] [stdout] test bwt_converter::tests::test_convert_to_vec ... ok
[INFO] [stdout] test bwt_util::tests::merging_samples_of_high_similarity_works ... ok
[INFO] [stdout] test bwt_converter::tests::test_compression ... ok
[INFO] [stdout] test bwt_converter::tests::test_save_bwt_numpy ... ok
[INFO] [stdout] test bwt_util::tests::test_cycle_breaker ... ok
[INFO] [stdout] test bwt_util::tests::test_diff_len ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_init ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_create_from_fastx ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_length ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_and_add ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_run_iter ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_string_sorted ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_vec ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_constrain_range ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_count_kmer ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_multi_string_unsorted ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_load_dynamicbwt_from_npy ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_single_string ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_001 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_003 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_simple_inserts ... ok
[INFO] [stdout] test rle_bwt::tests::test_constrain_range ... ok
[INFO] [stdout] test rle_bwt::tests::test_count_kmer ... ok
[INFO] [stdout] test rle_bwt::tests::test_fmindex ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_block_splits ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_increment_run ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_init ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_block_failure_001 ... ok
[INFO] [stdout] test rle_bwt::tests::test_load_rlebwt_from_npy ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_failure_case_002 ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_init ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_insert ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_insert_splitting ... ok
[INFO] [stdout] test string_util::tests::test_convert_itos ... ok
[INFO] [stdout] test run_block_av_flat::tests::test_to_vec ... ok
[INFO] [stdout] test string_util::tests::test_simple_index ... ok
[INFO] [stdout] test string_util::tests::test_reverse_complement_i ... ok
[INFO] [stdout] test string_util::tests::test_convert_stoi ... ok
[INFO] [stdout] test dynamic_bwt::tests::test_sampled_bwt ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_run_iter ... ok
[INFO] [stdout] test rle_bplus_tree::tests::test_10krandom_insert ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 47 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 16.67s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/msbwt2-build.rs (/opt/rustwide/target/debug/deps/msbwt2_build-eb177f5fc3a7ea31)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/bin/msbwt2-convert.rs (/opt/rustwide/target/debug/deps/msbwt2_convert-a484fe1100f47e68)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests msbwt2
[INFO] [stdout] 
[INFO] [stdout] running 38 tests
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::get_symbol_count (line 213) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::get_total_size (line 231) ... ok
[INFO] [stdout] test src/bwt_util.rs - bwt_util::naive_bwt (line 148) ... ok
[INFO] [stdout] test src/bwt_converter.rs - bwt_converter::save_bwt_numpy (line 89) ... FAILED
[INFO] [stdout] test src/bwt_converter.rs - bwt_converter::convert_to_vec (line 19) ... ok
[INFO] [stdout] test src/bwt_converter.rs - bwt_converter::save_bwt_runs_numpy (line 139) ... FAILED
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::insert_string (line 296) ... ok
[INFO] [stdout] test src/bwt_util.rs - bwt_util::generate_offset_hashmap (line 64) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::load_numpy_file (line 124) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::new (line 265) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::load_vector (line 63) ... ok
[INFO] [stdout] test src/bwt_util.rs - bwt_util::pairwise_bwt_merge (line 96) ... ok
[INFO] [stdout] test src/lib.rs - (line 20) ... ok
[INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::get_symbol_count (line 64) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::run_iter (line 419) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::iter (line 399) ... ok
[INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::count_kmer (line 105) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::DynamicBWT::to_vec (line 385) ... ok
[INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::load_numpy_file (line 49) ... ok
[INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::load_vector (line 33) ... ok
[INFO] [stdout] test src/rle_bplus_tree.rs - rle_bplus_tree::RLEBPlusTree::insert_and_count (line 196) ... ok
[INFO] [stdout] test src/msbwt_core.rs - msbwt_core::BWT::get_total_size (line 79) ... ok
[INFO] [stdout] test src/lib.rs - (line 30) ... ok
[INFO] [stdout] test src/rle_bplus_tree.rs - rle_bplus_tree::RLEBPlusTree::run_iter (line 443) ... ok
[INFO] [stdout] test src/rle_bplus_tree.rs - rle_bplus_tree::RLEBPlusTree::to_vec (line 401) ... ok
[INFO] [stdout] test src/dynamic_bwt.rs - dynamic_bwt::create_from_fastx (line 439) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::get_symbol_count (line 161) ... ok
[INFO] [stdout] test src/rle_bplus_tree.rs - rle_bplus_tree::RLEBPlusTree::count (line 138) ... ok
[INFO] [stdout] test src/run_block_av_flat.rs - run_block_av_flat::RLEBlock::count (line 84) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::load_vector (line 49) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::get_total_size (line 179) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::new (line 293) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::load_numpy_file (line 72) ... ok
[INFO] [stdout] test src/rle_bwt.rs - rle_bwt::RleBWT::with_bin_power (line 305) ... ok
[INFO] [stdout] test src/run_block_av_flat.rs - run_block_av_flat::RLEBlock::insert_and_count (line 133) ... ok
[INFO] [stdout] test src/string_util.rs - string_util::convert_itos (line 73) ... ok
[INFO] [stdout] test src/string_util.rs - string_util::reverse_complement_i (line 38) ... ok
[INFO] [stdout] test src/string_util.rs - string_util::convert_stoi (line 56) ... ok
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- src/bwt_converter.rs - bwt_converter::save_bwt_numpy (line 89) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] 
[INFO] [stdout] thread 'main' (184) panicked at src/bwt_converter.rs:12:41:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x608e8a15b0c2 - std::backtrace_rs::backtrace::libunwind::trace::h16acf28769fcd909
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x608e8a15b0c2 - std::backtrace_rs::backtrace::trace_unsynchronized::hb5541aa5d4f92513
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x608e8a15b0c2 - std::sys::backtrace::_print_fmt::h8ac8268cb667a306
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x608e8a15b0c2 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h47627beda0767f4c
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x608e8a16a49f - core::fmt::rt::Argument::fmt::h686a01ad57c1c92a
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/rt.rs:173:76
[INFO] [stdout]    5:     0x608e8a16a49f - core::fmt::write::h8a63064c67176fd8
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/mod.rs:1469:25
[INFO] [stdout]    6:     0x608e8a139523 - std::io::default_write_fmt::hc257f38f86d39af6
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x608e8a139523 - std::io::Write::write_fmt::h5e9b646cef91150b
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:1954:13
[INFO] [stdout]    8:     0x608e8a13e932 - std::sys::backtrace::BacktraceLock::print::h4634d27c0afbaebb
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    9:     0x608e8a1401bc - std::panicking::default_hook::{{closure}}::h23e0299d4738b766
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:301:27
[INFO] [stdout]   10:     0x608e8a140016 - std::panicking::default_hook::hfeec6294e8751b62
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:328:9
[INFO] [stdout]   11:     0x608e8a140795 - std::panicking::panic_with_hook::hd57cd463d793ed79
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:834:13
[INFO] [stdout]   12:     0x608e8a14062a - std::panicking::panic_handler::{{closure}}::hddd6216c3fddee3b
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:707:13
[INFO] [stdout]   13:     0x608e8a13ea69 - std::sys::backtrace::__rust_end_short_backtrace::h5e7a56f283378525
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:174:18
[INFO] [stdout]   14:     0x608e8a12e09d - __rustc[256c90bb7e548b45]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:698:5
[INFO] [stdout]   15:     0x608e8a16da80 - core::panicking::panic_fmt::hf19c198748ef6a95
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/panicking.rs:80:14
[INFO] [stdout]   16:     0x608e8a16d0a6 - core::result::unwrap_failed::he81173b5792ad6b0
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/result.rs:1862:5
[INFO] [stdout]   17:     0x608e8a0fae6f - rust_out::main::_doctest_main_src_bwt_converter_rs_89_0::he3599c83649a8e73
[INFO] [stdout]   18:     0x608e8a0fac46 - rust_out::main::he986860d8b7bc94f
[INFO] [stdout]   19:     0x608e8a0f8563 - core::ops::function::FnOnce::call_once::hd0f888ea33950d2d
[INFO] [stdout]   20:     0x608e8a0f84d6 - std::sys::backtrace::__rust_begin_short_backtrace::h70a8cfcb1f800bff
[INFO] [stdout]   21:     0x608e8a0f84b9 - std::rt::lang_start::{{closure}}::h03ca8d00642774ee
[INFO] [stdout]   22:     0x608e8a13a990 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hdf957eac011d0136
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/ops/function.rs:287:21
[INFO] [stdout]   23:     0x608e8a13a990 - std::panicking::catch_unwind::do_call::h9ff550f7799115e1
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stdout]   24:     0x608e8a13a990 - std::panicking::catch_unwind::ha7ce46787bb12905
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stdout]   25:     0x608e8a13a990 - std::panic::catch_unwind::h625b36596def7d39
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stdout]   26:     0x608e8a13a990 - std::rt::lang_start_internal::{{closure}}::h4cbc9430de699e2c
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:175:24
[INFO] [stdout]   27:     0x608e8a13a990 - std::panicking::catch_unwind::do_call::h5af2f11409a22e3e
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stdout]   28:     0x608e8a13a990 - std::panicking::catch_unwind::hf64cf7b0d8070f52
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stdout]   29:     0x608e8a13a990 - std::panic::catch_unwind::h480b74763390cdcf
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stdout]   30:     0x608e8a13a990 - std::rt::lang_start_internal::h4b3d04f698aef094
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:171:5
[INFO] [stdout]   31:     0x608e8a0f84a1 - std::rt::lang_start::h457230af78cce7e7
[INFO] [stdout]   32:     0x608e8a0fb115 - main
[INFO] [stdout]   33:     0x7677493581ca - <unknown>
[INFO] [stdout]   34:     0x76774935828b - __libc_start_main
[INFO] [stdout]   35:     0x608e8a0f76e5 - _start
[INFO] [stdout]   36:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] ---- src/bwt_converter.rs - bwt_converter::save_bwt_runs_numpy (line 139) stdout ----
[INFO] [stdout] Test executable failed (exit status: 101).
[INFO] [stdout] 
[INFO] [stdout] stderr:
[INFO] [stdout] 
[INFO] [stdout] thread 'main' (250) panicked at src/bwt_converter.rs:11:56:
[INFO] [stdout] called `Result::unwrap()` on an `Err` value: Os { code: 30, kind: ReadOnlyFilesystem, message: "Read-only file system" }
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x62340c4f2d02 - std::backtrace_rs::backtrace::libunwind::trace::h16acf28769fcd909
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x62340c4f2d02 - std::backtrace_rs::backtrace::trace_unsynchronized::hb5541aa5d4f92513
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x62340c4f2d02 - std::sys::backtrace::_print_fmt::h8ac8268cb667a306
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x62340c4f2d02 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h47627beda0767f4c
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x62340c50281f - core::fmt::rt::Argument::fmt::h686a01ad57c1c92a
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/rt.rs:173:76
[INFO] [stdout]    5:     0x62340c50281f - core::fmt::write::h8a63064c67176fd8
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/fmt/mod.rs:1469:25
[INFO] [stdout]    6:     0x62340c4d1163 - std::io::default_write_fmt::hc257f38f86d39af6
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x62340c4d1163 - std::io::Write::write_fmt::h5e9b646cef91150b
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/io/mod.rs:1954:13
[INFO] [stdout]    8:     0x62340c4d6572 - std::sys::backtrace::BacktraceLock::print::h4634d27c0afbaebb
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    9:     0x62340c4d7dfc - std::panicking::default_hook::{{closure}}::h23e0299d4738b766
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:301:27
[INFO] [stdout]   10:     0x62340c4d7c56 - std::panicking::default_hook::hfeec6294e8751b62
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:328:9
[INFO] [stdout]   11:     0x62340c4d83d5 - std::panicking::panic_with_hook::hd57cd463d793ed79
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:834:13
[INFO] [stdout]   12:     0x62340c4d826a - std::panicking::panic_handler::{{closure}}::hddd6216c3fddee3b
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:707:13
[INFO] [stdout]   13:     0x62340c4d66a9 - std::sys::backtrace::__rust_end_short_backtrace::h5e7a56f283378525
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/sys/backtrace.rs:174:18
[INFO] [stdout]   14:     0x62340c4c5cdd - __rustc[256c90bb7e548b45]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:698:5
[INFO] [stdout]   15:     0x62340c509eb0 - core::panicking::panic_fmt::hf19c198748ef6a95
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/panicking.rs:80:14
[INFO] [stdout]   16:     0x62340c5094d6 - core::result::unwrap_failed::he81173b5792ad6b0
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/result.rs:1862:5
[INFO] [stdout]   17:     0x62340c4929dc - rust_out::main::_doctest_main_src_bwt_converter_rs_139_0::he6897322a2ba07d9
[INFO] [stdout]   18:     0x62340c4927f6 - rust_out::main::he986860d8b7bc94f
[INFO] [stdout]   19:     0x62340c48b943 - core::ops::function::FnOnce::call_once::hd0f888ea33950d2d
[INFO] [stdout]   20:     0x62340c48b6d6 - std::sys::backtrace::__rust_begin_short_backtrace::h70a8cfcb1f800bff
[INFO] [stdout]   21:     0x62340c48b6b9 - std::rt::lang_start::{{closure}}::h03ca8d00642774ee
[INFO] [stdout]   22:     0x62340c4d25d0 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::hdf957eac011d0136
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/core/src/ops/function.rs:287:21
[INFO] [stdout]   23:     0x62340c4d25d0 - std::panicking::catch_unwind::do_call::h9ff550f7799115e1
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stdout]   24:     0x62340c4d25d0 - std::panicking::catch_unwind::ha7ce46787bb12905
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stdout]   25:     0x62340c4d25d0 - std::panic::catch_unwind::h625b36596def7d39
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stdout]   26:     0x62340c4d25d0 - std::rt::lang_start_internal::{{closure}}::h4cbc9430de699e2c
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:175:24
[INFO] [stdout]   27:     0x62340c4d25d0 - std::panicking::catch_unwind::do_call::h5af2f11409a22e3e
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:590:40
[INFO] [stdout]   28:     0x62340c4d25d0 - std::panicking::catch_unwind::hf64cf7b0d8070f52
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panicking.rs:553:19
[INFO] [stdout]   29:     0x62340c4d25d0 - std::panic::catch_unwind::h480b74763390cdcf
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/panic.rs:359:14
[INFO] [stdout]   30:     0x62340c4d25d0 - std::rt::lang_start_internal::h4b3d04f698aef094
[INFO] [stdout]                                at /rustc/3b4dd9bf1410f8da6329baa36ce5e37673cbbd1f/library/std/src/rt.rs:171:5
[INFO] [stdout]   31:     0x62340c48b6a1 - std::rt::lang_start::h457230af78cce7e7
[INFO] [stdout]   32:     0x62340c492d05 - main
[INFO] [stdout]   33:     0x7d9da77401ca - <unknown>
[INFO] [stdout]   34:     0x7d9da774028b - __libc_start_main
[INFO] [stdout]   35:     0x62340c48ab95 - _start
[INFO] [stdout]   36:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     src/bwt_converter.rs - bwt_converter::save_bwt_numpy (line 89)
[INFO] [stdout]     src/bwt_converter.rs - bwt_converter::save_bwt_runs_numpy (line 139)
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 36 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.38s
[INFO] [stdout] 
[INFO] [stderr] error: doctest failed, to rerun pass `--doc`
[INFO] running `Command { std: "docker" "inspect" "2e3530b4894f169ea859316d74ab730cb0e71d6f0bae19e4c9055a85774bc5cc", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2e3530b4894f169ea859316d74ab730cb0e71d6f0bae19e4c9055a85774bc5cc", kill_on_drop: false }`
[INFO] [stdout] 2e3530b4894f169ea859316d74ab730cb0e71d6f0bae19e4c9055a85774bc5cc
