[INFO] fetching crate stats_on_gff3 0.1.26...
[INFO] testing stats_on_gff3-0.1.26 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate stats_on_gff3 0.1.26 into /workspace/builds/worker-0-tc2/source
[INFO] started tweaking crates.io crate stats_on_gff3 0.1.26
[INFO] finished tweaking crates.io crate stats_on_gff3 0.1.26
[INFO] tweaked toml for crates.io crate stats_on_gff3 0.1.26 written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate stats_on_gff3 0.1.26 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate stats_on_gff3 0.1.26 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 48458479404df5d30991990ed0ab1693c7e551663b6725bc9ecbd124f53e26fb
[INFO] running `Command { std: "docker" "start" "-a" "48458479404df5d30991990ed0ab1693c7e551663b6725bc9ecbd124f53e26fb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "48458479404df5d30991990ed0ab1693c7e551663b6725bc9ecbd124f53e26fb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "48458479404df5d30991990ed0ab1693c7e551663b6725bc9ecbd124f53e26fb", kill_on_drop: false }`
[INFO] [stdout] 48458479404df5d30991990ed0ab1693c7e551663b6725bc9ecbd124f53e26fb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5c63e1f9726ae915b6e529e7cc2d2bf552c70874efb70f23197cb30222280f8b
[INFO] running `Command { std: "docker" "start" "-a" "5c63e1f9726ae915b6e529e7cc2d2bf552c70874efb70f23197cb30222280f8b", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.78
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling libc v0.2.153
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling serde v1.0.196
[INFO] [stderr]    Compiling memchr v2.7.1
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]    Compiling bytemuck v1.14.3
[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]    Compiling num-traits v0.2.18
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling thiserror v1.0.57
[INFO] [stderr]    Compiling regex-syntax v0.8.2
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling anstyle-parse v0.2.3
[INFO] [stderr]    Compiling hashbrown v0.14.3
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling anyhow v1.0.79
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling anstyle v1.0.6
[INFO] [stderr]    Compiling anstyle-query v1.0.2
[INFO] [stderr]    Compiling itoa v1.0.10
[INFO] [stderr]    Compiling anstream v0.6.11
[INFO] [stderr]    Compiling ryu v1.0.16
[INFO] [stderr]    Compiling clap_lex v0.7.0
[INFO] [stderr]    Compiling either v1.10.0
[INFO] [stderr]    Compiling strsim v0.11.0
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling quote v1.0.35
[INFO] [stderr]    Compiling wide v0.7.15
[INFO] [stderr]    Compiling aho-corasick v1.1.2
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling clap_builder v4.5.0
[INFO] [stderr]    Compiling syn v2.0.48
[INFO] [stderr]    Compiling getrandom v0.2.12
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.25.0
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling bytecount v0.6.7
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling indexmap v2.2.3
[INFO] [stderr]    Compiling num-complex v0.4.5
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v3.9.2
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling petgraph v0.6.4
[INFO] [stderr]    Compiling regex-automata v0.4.5
[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling regex v1.10.3
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling getset v0.1.2
[INFO] [stderr]    Compiling serde_derive v1.0.196
[INFO] [stderr]    Compiling thiserror-impl v1.0.57
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling clap_derive v4.5.0
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling clap v4.5.0
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling multimap v0.9.1
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling bio v1.5.0
[INFO] [stderr]    Compiling stats_on_gff3 v0.1.26 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:914:46
[INFO] [stdout]     |
[INFO] [stdout] 914 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stdout]     |                                              ^                                                ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 914 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stdout] 914 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene && a.cds_length <= b.cds_length);
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:915:46
[INFO] [stdout]     |
[INFO] [stdout] 915 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stdout]     |                                              ^                ^
[INFO] [stdout]     |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 915 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stdout] 915 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene);
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 49.42s
[INFO] running `Command { std: "docker" "inspect" "5c63e1f9726ae915b6e529e7cc2d2bf552c70874efb70f23197cb30222280f8b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c63e1f9726ae915b6e529e7cc2d2bf552c70874efb70f23197cb30222280f8b", kill_on_drop: false }`
[INFO] [stdout] 5c63e1f9726ae915b6e529e7cc2d2bf552c70874efb70f23197cb30222280f8b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 75436ed6519d35eab844a964bd33ba4130b6bb9496b00a221058a05a7f9ed986
[INFO] running `Command { std: "docker" "start" "-a" "75436ed6519d35eab844a964bd33ba4130b6bb9496b00a221058a05a7f9ed986", kill_on_drop: false }`
[INFO] [stderr]    Compiling stats_on_gff3 v0.1.26 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:914:46
[INFO] [stdout]     |
[INFO] [stdout] 914 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stdout]     |                                              ^                                                ^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 914 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stdout] 914 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene && a.cds_length <= b.cds_length);
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unnecessary parentheses around closure body
[INFO] [stdout]    --> src/main.rs:915:46
[INFO] [stdout]     |
[INFO] [stdout] 915 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stdout]     |                                              ^                ^
[INFO] [stdout]     |
[INFO] [stdout] help: remove these parentheses
[INFO] [stdout]     |
[INFO] [stdout] 915 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stdout] 915 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene);
[INFO] [stdout]     |
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.74s
[INFO] running `Command { std: "docker" "inspect" "75436ed6519d35eab844a964bd33ba4130b6bb9496b00a221058a05a7f9ed986", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "75436ed6519d35eab844a964bd33ba4130b6bb9496b00a221058a05a7f9ed986", kill_on_drop: false }`
[INFO] [stdout] 75436ed6519d35eab844a964bd33ba4130b6bb9496b00a221058a05a7f9ed986
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] babdab9439bd7277e94fb094cfa8b8f1567e7e42b76809331e75fe61eac0381f
[INFO] running `Command { std: "docker" "start" "-a" "babdab9439bd7277e94fb094cfa8b8f1567e7e42b76809331e75fe61eac0381f", kill_on_drop: false }`
[INFO] [stderr] warning: unnecessary parentheses around closure body
[INFO] [stderr]    --> src/main.rs:914:46
[INFO] [stderr]     |
[INFO] [stderr] 914 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stderr]     |                                              ^                                                ^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_parens)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr] 914 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene && a.cds_length <= b.cds_length));
[INFO] [stderr] 914 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene && a.cds_length <= b.cds_length);
[INFO] [stderr]     |
[INFO] [stderr] 
[INFO] [stderr] warning: unnecessary parentheses around closure body
[INFO] [stderr]    --> src/main.rs:915:46
[INFO] [stderr]     |
[INFO] [stderr] 915 |             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stderr]     |                                              ^                ^
[INFO] [stderr]     |
[INFO] [stderr] help: remove these parentheses
[INFO] [stderr]     |
[INFO] [stderr] 915 -             transcripts_desc.dedup_by(|a, b| (a.gene == b.gene));
[INFO] [stderr] 915 +             transcripts_desc.dedup_by(|a, b| a.gene == b.gene);
[INFO] [stderr]     |
[INFO] [stderr] 
[INFO] [stderr] warning: `stats_on_gff3` (bin "stats_on_gff3" test) generated 2 warnings (run `cargo fix --bin "stats_on_gff3" -p stats_on_gff3 --tests` to apply 2 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.11s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/stats_on_gff3-e8c20991e9dc89b6)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "babdab9439bd7277e94fb094cfa8b8f1567e7e42b76809331e75fe61eac0381f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "babdab9439bd7277e94fb094cfa8b8f1567e7e42b76809331e75fe61eac0381f", kill_on_drop: false }`
[INFO] [stdout] babdab9439bd7277e94fb094cfa8b8f1567e7e42b76809331e75fe61eac0381f