[INFO] fetching crate sketchlib 0.2.4...
[INFO] testing sketchlib-0.2.4 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate sketchlib 0.2.4 into /workspace/builds/worker-1-tc2/source
[INFO] started tweaking crates.io crate sketchlib 0.2.4
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate sketchlib 0.2.4
[INFO] tweaked toml for crates.io crate sketchlib 0.2.4 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate sketchlib 0.2.4 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate sketchlib 0.2.4 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] c9b1297fa8e8992be831cef67792c5dba1fb63b874e475859853a0eb9a12fc34
[INFO] running `Command { std: "docker" "start" "-a" "c9b1297fa8e8992be831cef67792c5dba1fb63b874e475859853a0eb9a12fc34", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "c9b1297fa8e8992be831cef67792c5dba1fb63b874e475859853a0eb9a12fc34", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c9b1297fa8e8992be831cef67792c5dba1fb63b874e475859853a0eb9a12fc34", kill_on_drop: false }`
[INFO] [stdout] c9b1297fa8e8992be831cef67792c5dba1fb63b874e475859853a0eb9a12fc34
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 355f23e63f38f37dd49c882ef712c337377b2de7cfdc84ab8bbd84cd34608d7d
[INFO] running `Command { std: "docker" "start" "-a" "355f23e63f38f37dd49c882ef712c337377b2de7cfdc84ab8bbd84cd34608d7d", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.175
[INFO] [stderr]    Compiling proc-macro2 v1.0.97
[INFO] [stderr]    Compiling unicode-ident v1.0.18
[INFO] [stderr]    Compiling cfg-if v1.0.1
[INFO] [stderr]    Compiling pkg-config v0.3.32
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]    Compiling cc v1.2.32
[INFO] [stderr]    Compiling memchr v2.7.5
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling zerocopy v0.8.26
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]    Compiling utf8parse v0.2.2
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling anstyle-parse v0.2.7
[INFO] [stderr]    Compiling adler2 v2.0.1
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling num-conv v0.1.0
[INFO] [stderr]    Compiling anstyle-query v1.1.4
[INFO] [stderr]    Compiling powerfmt v0.2.0
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]    Compiling colorchoice v1.0.4
[INFO] [stderr]    Compiling anstyle v1.0.11
[INFO] [stderr]    Compiling time-core v0.1.4
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.1
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]    Compiling zlib-rs v0.5.1
[INFO] [stderr]    Compiling time-macros v0.2.22
[INFO] [stderr]    Compiling anstream v0.6.20
[INFO] [stderr]    Compiling deranged v0.4.0
[INFO] [stderr]    Compiling syn v2.0.105
[INFO] [stderr]    Compiling rayon v1.11.0
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling half v2.6.0
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling anyhow v1.0.99
[INFO] [stderr]    Compiling ciborium-io v0.2.2
[INFO] [stderr]    Compiling strsim v0.11.1
[INFO] [stderr]    Compiling clap_lex v0.7.5
[INFO] [stderr]    Compiling unicode-width v0.2.1
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]    Compiling num_threads v0.1.7
[INFO] [stderr]    Compiling console v0.15.11
[INFO] [stderr]    Compiling time v0.3.41
[INFO] [stderr]    Compiling clap_builder v4.5.44
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling rmp v0.8.14
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling buffer-redux v1.0.2
[INFO] [stderr]    Compiling allocator-api2 v0.2.21
[INFO] [stderr]    Compiling libz-rs-sys v0.5.1
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling number_prefix v0.4.0
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling clap_derive v4.5.45
[INFO] [stderr]    Compiling flate2 v1.1.2
[INFO] [stderr]    Compiling bytemuck v1.23.2
[INFO] [stderr]    Compiling unicode-segmentation v1.12.0
[INFO] [stderr]    Compiling log v0.4.27
[INFO] [stderr]    Compiling simple_logger v4.3.3
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling needletail v0.5.1
[INFO] [stderr]    Compiling indicatif v0.17.11
[INFO] [stderr]    Compiling num_cpus v1.17.0
[INFO] [stderr]    Compiling memmap2 v0.9.7
[INFO] [stderr]    Compiling clap v4.5.45
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling rmp-serde v1.3.0
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling roaring v0.10.12
[INFO] [stderr]    Compiling sketchlib v0.2.4 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 07s
[INFO] running `Command { std: "docker" "inspect" "355f23e63f38f37dd49c882ef712c337377b2de7cfdc84ab8bbd84cd34608d7d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "355f23e63f38f37dd49c882ef712c337377b2de7cfdc84ab8bbd84cd34608d7d", kill_on_drop: false }`
[INFO] [stdout] 355f23e63f38f37dd49c882ef712c337377b2de7cfdc84ab8bbd84cd34608d7d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6532e820f493b62298b4a79c669ced126f2ae450497cee54a08fbf9938fdcfad
[INFO] running `Command { std: "docker" "start" "-a" "6532e820f493b62298b4a79c669ced126f2ae450497cee54a08fbf9938fdcfad", kill_on_drop: false }`
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling rayon v1.11.0
[INFO] [stderr]    Compiling bstr v1.12.0
[INFO] [stderr]    Compiling rustix v1.0.8
[INFO] [stderr]    Compiling predicates-core v1.0.9
[INFO] [stderr]    Compiling same-file v1.0.6
[INFO] [stderr]    Compiling bitflags v2.9.1
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stderr]    Compiling walkdir v2.5.0
[INFO] [stderr]    Compiling doc-comment v0.3.3
[INFO] [stderr]    Compiling linux-raw-sys v0.9.4
[INFO] [stderr]    Compiling fastrand v2.3.0
[INFO] [stderr]    Compiling normalize-line-endings v0.3.0
[INFO] [stderr]    Compiling termtree v0.5.1
[INFO] [stderr]    Compiling predicates-tree v1.0.12
[INFO] [stderr]    Compiling predicates v3.1.3
[INFO] [stderr]    Compiling snapbox-macros v0.3.10
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling float-cmp v0.9.0
[INFO] [stderr]    Compiling similar v2.7.0
[INFO] [stderr]    Compiling diff v0.1.13
[INFO] [stderr]    Compiling yansi v1.0.1
[INFO] [stderr]    Compiling pretty_assertions v1.4.1
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling snapbox v0.6.21
[INFO] [stderr]    Compiling indicatif v0.17.11
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling tempfile v3.20.0
[INFO] [stderr]    Compiling globset v0.4.16
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling predicates v2.1.5
[INFO] [stderr]    Compiling ignore v0.4.23
[INFO] [stderr]    Compiling sketchlib v0.2.4 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling globwalk v0.9.1
[INFO] [stderr]    Compiling assert_fs v1.1.3
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 37.24s
[INFO] running `Command { std: "docker" "inspect" "6532e820f493b62298b4a79c669ced126f2ae450497cee54a08fbf9938fdcfad", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6532e820f493b62298b4a79c669ced126f2ae450497cee54a08fbf9938fdcfad", kill_on_drop: false }`
[INFO] [stdout] 6532e820f493b62298b4a79c669ced126f2ae450497cee54a08fbf9938fdcfad
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 030b7655df775540ccc7c286c042a0ae13ac6cd37f0e85985f9b71e321a7212e
[INFO] running `Command { std: "docker" "start" "-a" "030b7655df775540ccc7c286c042a0ae13ac6cd37f0e85985f9b71e321a7212e", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.21s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/sketchlib-6941e3c09c009c76)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test io::test_reorder_input_files ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/sketchlib-2bafe7bd885cd098)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/completeness.rs (/opt/rustwide/target/debug/deps/completeness-bce44649a3363362)
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test tests::test_completeness_correction_formula_exact ... ok
[INFO] [stdout] test tests::test_completeness_extra_genomes ... ok
[INFO] [stdout] test tests::test_completeness_ordering ... ok
[INFO] [stdout] test tests::test_completeness_missing_genomes ... ok
[INFO] [stderr]      Running tests/concat.rs (/opt/rustwide/target/debug/deps/concat-a7633bd8ac8b2e66)
[INFO] [stdout] test tests::test_completeness_precluster ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 7.98s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test tests::test_concat_sketches ... ok
[INFO] [stderr]      Running tests/delete.rs (/opt/rustwide/target/debug/deps/delete-209064beadabf527)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 8.47s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test tests::test_delete_sketches ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 4.34s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/distance.rs (/opt/rustwide/target/debug/deps/distance-095ff6e3c9e870e1)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test tests::dense_distances ... ok
[INFO] [stdout] test tests::knn_dists ... ok
[INFO] [stdout] test tests::subset_dists ... ok
[INFO] [stderr]      Running tests/inverted.rs (/opt/rustwide/target/debug/deps/inverted-b374d373d734be51)
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 18.38s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test tests::inverted_sketch ... ok
[INFO] [stdout] test tests::inverted_reorder ... ok
[INFO] [stdout] test tests::inverted_precluster ... ok
[INFO] [stderr]      Running tests/merge.rs (/opt/rustwide/target/debug/deps/merge-e92edf0aa2846853)
[INFO] [stdout] test tests::inverted_query ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 18.25s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test tests::test_is_compatible_with ... ok
[INFO] [stdout] test tests::test_merge_sketches ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.83s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/sketch.rs (/opt/rustwide/target/debug/deps/sketch-14ff3f5c6150f490)
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test tests::sketch_fastq ... ok
[INFO] [stdout] test tests::sketch_fasta ... ok
[INFO] [stderr]    Doc-tests sketchlib
[INFO] [stdout] test tests::legacy_databases ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.79s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "030b7655df775540ccc7c286c042a0ae13ac6cd37f0e85985f9b71e321a7212e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "030b7655df775540ccc7c286c042a0ae13ac6cd37f0e85985f9b71e321a7212e", kill_on_drop: false }`
[INFO] [stdout] 030b7655df775540ccc7c286c042a0ae13ac6cd37f0e85985f9b71e321a7212e