[INFO] fetching crate needleman 0.2.0...
[INFO] testing needleman-0.2.0 against beta-2025-10-28 for beta-1.92-2
[INFO] extracting crate needleman 0.2.0 into /workspace/builds/worker-5-tc2/source
[INFO] started tweaking crates.io crate needleman 0.2.0
[INFO] finished tweaking crates.io crate needleman 0.2.0
[INFO] tweaked toml for crates.io crate needleman 0.2.0 written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate needleman 0.2.0 on toolchain beta-2025-10-28
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate needleman 0.2.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-10-28" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] de4050409e35902920d9f2471674cee040de9da83dc7dc8de8810252244ad803
[INFO] running `Command { std: "docker" "start" "-a" "de4050409e35902920d9f2471674cee040de9da83dc7dc8de8810252244ad803", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "de4050409e35902920d9f2471674cee040de9da83dc7dc8de8810252244ad803", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "de4050409e35902920d9f2471674cee040de9da83dc7dc8de8810252244ad803", kill_on_drop: false }`
[INFO] [stdout] de4050409e35902920d9f2471674cee040de9da83dc7dc8de8810252244ad803
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d0b75367af40822d2335f59dce0caaaa71a5241b2c69385e0c085a723d3906dd
[INFO] running `Command { std: "docker" "start" "-a" "d0b75367af40822d2335f59dce0caaaa71a5241b2c69385e0c085a723d3906dd", kill_on_drop: false }`
[INFO] [stderr]    Compiling needleman v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: function `preprocess_gene` is never used
[INFO] [stdout]  --> src/main.rs:7:4
[INFO] [stdout]   |
[INFO] [stdout] 7 | fn preprocess_gene(s:String) -> String{
[INFO] [stdout]   |    ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: struct `AlignmentResult` is never constructed
[INFO] [stdout]  --> src/needleman.rs:6:12
[INFO] [stdout]   |
[INFO] [stdout] 6 | pub struct AlignmentResult {
[INFO] [stdout]   |            ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `new` is never used
[INFO] [stdout]   --> src/needleman.rs:13:12
[INFO] [stdout]    |
[INFO] [stdout] 12 | impl AlignmentResult {
[INFO] [stdout]    | -------------------- associated function in this implementation
[INFO] [stdout] 13 |     pub fn new(score: i32, res1: String, res2: String) -> AlignmentResult {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: struct `KbandAlignmentResult` is never constructed
[INFO] [stdout]   --> src/needleman.rs:19:12
[INFO] [stdout]    |
[INFO] [stdout] 19 | pub struct KbandAlignmentResult {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `new` is never used
[INFO] [stdout]   --> src/needleman.rs:28:12
[INFO] [stdout]    |
[INFO] [stdout] 27 | impl KbandAlignmentResult {
[INFO] [stdout]    | ------------------------- associated function in this implementation
[INFO] [stdout] 28 |     pub fn new(score: i32, res1: String, res2: String, k_band: usize) -> KbandAlignmentResult {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `needleman` is never used
[INFO] [stdout]   --> src/needleman.rs:47:8
[INFO] [stdout]    |
[INFO] [stdout] 47 | pub fn needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) -> Align...
[INFO] [stdout]    |        ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `kband_needleman` is never used
[INFO] [stdout]    --> src/needleman.rs:133:8
[INFO] [stdout]     |
[INFO] [stdout] 133 | pub fn kband_needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) ->...
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.68s
[INFO] running `Command { std: "docker" "inspect" "d0b75367af40822d2335f59dce0caaaa71a5241b2c69385e0c085a723d3906dd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d0b75367af40822d2335f59dce0caaaa71a5241b2c69385e0c085a723d3906dd", kill_on_drop: false }`
[INFO] [stdout] d0b75367af40822d2335f59dce0caaaa71a5241b2c69385e0c085a723d3906dd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 12a43f567361d33f1e5131ed4b63b5ea092e007d28198ea572a71999f8c899af
[INFO] running `Command { std: "docker" "start" "-a" "12a43f567361d33f1e5131ed4b63b5ea092e007d28198ea572a71999f8c899af", kill_on_drop: false }`
[INFO] [stderr]    Compiling needleman v0.2.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: function `preprocess_gene` is never used
[INFO] [stdout]  --> src/main.rs:7:4
[INFO] [stdout]   |
[INFO] [stdout] 7 | fn preprocess_gene(s:String) -> String{
[INFO] [stdout]   |    ^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: struct `AlignmentResult` is never constructed
[INFO] [stdout]  --> src/needleman.rs:6:12
[INFO] [stdout]   |
[INFO] [stdout] 6 | pub struct AlignmentResult {
[INFO] [stdout]   |            ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `new` is never used
[INFO] [stdout]   --> src/needleman.rs:13:12
[INFO] [stdout]    |
[INFO] [stdout] 12 | impl AlignmentResult {
[INFO] [stdout]    | -------------------- associated function in this implementation
[INFO] [stdout] 13 |     pub fn new(score: i32, res1: String, res2: String) -> AlignmentResult {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: struct `KbandAlignmentResult` is never constructed
[INFO] [stdout]   --> src/needleman.rs:19:12
[INFO] [stdout]    |
[INFO] [stdout] 19 | pub struct KbandAlignmentResult {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `new` is never used
[INFO] [stdout]   --> src/needleman.rs:28:12
[INFO] [stdout]    |
[INFO] [stdout] 27 | impl KbandAlignmentResult {
[INFO] [stdout]    | ------------------------- associated function in this implementation
[INFO] [stdout] 28 |     pub fn new(score: i32, res1: String, res2: String, k_band: usize) -> KbandAlignmentResult {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `needleman` is never used
[INFO] [stdout]   --> src/needleman.rs:47:8
[INFO] [stdout]    |
[INFO] [stdout] 47 | pub fn needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) -> Align...
[INFO] [stdout]    |        ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `kband_needleman` is never used
[INFO] [stdout]    --> src/needleman.rs:133:8
[INFO] [stdout]     |
[INFO] [stdout] 133 | pub fn kband_needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) ->...
[INFO] [stdout]     |        ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.40s
[INFO] running `Command { std: "docker" "inspect" "12a43f567361d33f1e5131ed4b63b5ea092e007d28198ea572a71999f8c899af", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "12a43f567361d33f1e5131ed4b63b5ea092e007d28198ea572a71999f8c899af", kill_on_drop: false }`
[INFO] [stdout] 12a43f567361d33f1e5131ed4b63b5ea092e007d28198ea572a71999f8c899af
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-10-28" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 484877156dd041813ea99eed484714f71405c08fac1541a4a2d4a8614d1102b9
[INFO] running `Command { std: "docker" "start" "-a" "484877156dd041813ea99eed484714f71405c08fac1541a4a2d4a8614d1102b9", kill_on_drop: false }`
[INFO] [stderr] warning: function `preprocess_gene` is never used
[INFO] [stderr]  --> src/main.rs:7:4
[INFO] [stderr]   |
[INFO] [stderr] 7 | fn preprocess_gene(s:String) -> String{
[INFO] [stderr]   |    ^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: struct `AlignmentResult` is never constructed
[INFO] [stderr]  --> src/needleman.rs:6:12
[INFO] [stderr]   |
[INFO] [stderr] 6 | pub struct AlignmentResult {
[INFO] [stderr]   |            ^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: associated function `new` is never used
[INFO] [stderr]   --> src/needleman.rs:13:12
[INFO] [stderr]    |
[INFO] [stderr] 12 | impl AlignmentResult {
[INFO] [stderr]    | -------------------- associated function in this implementation
[INFO] [stderr] 13 |     pub fn new(score: i32, res1: String, res2: String) -> AlignmentResult {
[INFO] [stderr]    |            ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: struct `KbandAlignmentResult` is never constructed
[INFO] [stderr]   --> src/needleman.rs:19:12
[INFO] [stderr]    |
[INFO] [stderr] 19 | pub struct KbandAlignmentResult {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: associated function `new` is never used
[INFO] [stderr]   --> src/needleman.rs:28:12
[INFO] [stderr]    |
[INFO] [stderr] 27 | impl KbandAlignmentResult {
[INFO] [stderr]    | ------------------------- associated function in this implementation
[INFO] [stderr] 28 |     pub fn new(score: i32, res1: String, res2: String, k_band: usize) -> KbandAlignmentResult {
[INFO] [stderr]    |            ^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `needleman` is never used
[INFO] [stderr]   --> src/needleman.rs:47:8
[INFO] [stderr]    |
[INFO] [stderr] 47 | pub fn needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) -> Align...
[INFO] [stderr]    |        ^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `kband_needleman` is never used
[INFO] [stderr]    --> src/needleman.rs:133:8
[INFO] [stderr]     |
[INFO] [stderr] 133 | pub fn kband_needleman(s1: &str, s2: &str, match_score: i32, mismatch_score: i32, indel_score: i32, ignore_case: bool, any_char: char) ->...
[INFO] [stderr]     |        ^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `needleman` (bin "needleman" test) generated 7 warnings
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/needleman-a707cc81346293cf)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/needleman-fe8796427ec5ce93)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests needleman
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "484877156dd041813ea99eed484714f71405c08fac1541a4a2d4a8614d1102b9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "484877156dd041813ea99eed484714f71405c08fac1541a4a2d4a8614d1102b9", kill_on_drop: false }`
[INFO] [stdout] 484877156dd041813ea99eed484714f71405c08fac1541a4a2d4a8614d1102b9