[INFO] cloning repository https://github.com/pangenome/vcfbub
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/pangenome/vcfbub" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fvcfbub", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fvcfbub'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 77289654b246a4e3422902d04277e258d9fabe9a
[INFO] testing pangenome/vcfbub against 1.91.0 for beta-1.92-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fvcfbub" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/pangenome/vcfbub
[INFO] finished tweaking git repo https://github.com/pangenome/vcfbub
[INFO] tweaked toml for git repo https://github.com/pangenome/vcfbub written to /workspace/builds/worker-6-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/pangenome/vcfbub on toolchain 1.91.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.91.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/pangenome/vcfbub already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.91.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded thiserror v1.0.69
[INFO] [stderr]   Downloaded bitflags v2.9.1
[INFO] [stderr]   Downloaded proc-macro2 v1.0.95
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded quote v1.0.40
[INFO] [stderr]   Downloaded syn v2.0.102
[INFO] [stderr]   Downloaded libz-sys v1.1.22
[INFO] [stderr]   Downloaded winapi v0.3.9
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded icu_locale_core v2.0.0
[INFO] [stderr]   Downloaded percent-encoding v2.3.1
[INFO] [stderr]   Downloaded atty v0.2.14
[INFO] [stderr]   Downloaded flate2 v1.1.2
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded thiserror-impl v1.0.69
[INFO] [stderr]   Downloaded strum_macros v0.26.4
[INFO] [stderr]   Downloaded r-efi v5.2.0
[INFO] [stderr]   Downloaded idna v1.0.3
[INFO] [stderr]   Downloaded bitflags v1.3.2
[INFO] [stderr]   Downloaded vec_map v0.8.2
[INFO] [stderr]   Downloaded potential_utf v0.1.2
[INFO] [stderr]   Downloaded rust-htslib v0.46.0
[INFO] [stderr]   Downloaded wasi v0.14.2+wasi-0.2.4
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded zerotrie v0.2.2
[INFO] [stderr]   Downloaded icu_collections v2.0.0
[INFO] [stderr]   Downloaded byteorder v1.5.0
[INFO] [stderr]   Downloaded serde v1.0.219
[INFO] [stderr]   Downloaded icu_properties v2.0.1
[INFO] [stderr]   Downloaded serde_derive v1.0.219
[INFO] [stderr]   Downloaded glob v0.3.2
[INFO] [stderr]   Downloaded cfg-if v1.0.1
[INFO] [stderr]   Downloaded ansi_term v0.12.1
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded lazy_static v1.5.0
[INFO] [stderr]   Downloaded getrandom v0.3.3
[INFO] [stderr]   Downloaded libc v0.2.172
[INFO] [stderr]   Downloaded unicode-width v0.1.14
[INFO] [stderr]   Downloaded form_urlencoded v1.2.1
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded clap v2.34.0
[INFO] [stderr]   Downloaded zerovec-derive v0.11.1
[INFO] [stderr]   Downloaded icu_normalizer v2.0.0
[INFO] [stderr]   Downloaded icu_provider v2.0.0
[INFO] [stderr]   Downloaded yoke v0.8.0
[INFO] [stderr]   Downloaded jobserver v0.1.33
[INFO] [stderr]   Downloaded textwrap v0.11.0
[INFO] [stderr]   Downloaded cmake v0.1.54
[INFO] [stderr]   Downloaded crc32fast v1.4.2
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded regex-automata v0.4.9
[INFO] [stderr]   Downloaded rustversion v1.0.21
[INFO] [stderr]   Downloaded wit-bindgen-rt v0.39.0
[INFO] [stderr]   Downloaded syn v1.0.109
[INFO] [stderr]   Downloaded regex-syntax v0.8.5
[INFO] [stderr]   Downloaded unicode-ident v1.0.18
[INFO] [stderr]   Downloaded icu_properties_data v2.0.1
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded strsim v0.8.0
[INFO] [stderr]   Downloaded cc v1.2.26
[INFO] [stderr]   Downloaded writeable v0.6.1
[INFO] [stderr]   Downloaded hermit-abi v0.1.19
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded yoke-derive v0.8.0
[INFO] [stderr]   Downloaded derive-new v0.5.9
[INFO] [stderr]   Downloaded quick-error v1.2.3
[INFO] [stderr]   Downloaded icu_normalizer_data v2.0.0
[INFO] [stderr]   Downloaded url v2.5.4
[INFO] [stderr]   Downloaded litemap v0.8.0
[INFO] [stderr]   Downloaded aho-corasick v1.1.3
[INFO] [stderr]   Downloaded regex v1.11.1
[INFO] [stderr]   Downloaded zerovec v0.11.2
[INFO] [stderr]   Downloaded memchr v2.7.5
[INFO] [stderr]   Downloaded winapi-x86_64-pc-windows-gnu v0.4.0
[INFO] [stderr]   Downloaded winapi-i686-pc-windows-gnu v0.4.0
[INFO] [stderr]   Downloaded tinystr v0.8.1
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded stable_deref_trait v1.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3323b6c649e2e301555319c7a5f1eb4bdbfb6e8ea17725e3857c7a6b9cffb020
[INFO] running `Command { std: "docker" "start" "-a" "3323b6c649e2e301555319c7a5f1eb4bdbfb6e8ea17725e3857c7a6b9cffb020", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3323b6c649e2e301555319c7a5f1eb4bdbfb6e8ea17725e3857c7a6b9cffb020", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3323b6c649e2e301555319c7a5f1eb4bdbfb6e8ea17725e3857c7a6b9cffb020", kill_on_drop: false }`
[INFO] [stdout] 3323b6c649e2e301555319c7a5f1eb4bdbfb6e8ea17725e3857c7a6b9cffb020
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 182586fae5fd7b691d88ef612774d4c8e9159b257743810633d49a05932d7baf
[INFO] running `Command { std: "docker" "start" "-a" "182586fae5fd7b691d88ef612774d4c8e9159b257743810633d49a05932d7baf", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.95
[INFO] [stderr]    Compiling unicode-ident v1.0.18
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling libc v0.2.172
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling litemap v0.8.0
[INFO] [stderr]    Compiling writeable v0.6.1
[INFO] [stderr]    Compiling icu_properties_data v2.0.1
[INFO] [stderr]    Compiling icu_normalizer_data v2.0.0
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling pkg-config v0.3.32
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling rustversion v1.0.21
[INFO] [stderr]    Compiling memchr v2.7.5
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling glob v0.3.2
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling utf8_iter v1.0.4
[INFO] [stderr]    Compiling percent-encoding v2.3.1
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]    Compiling cfg-if v1.0.1
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling unicode-width v0.1.14
[INFO] [stderr]    Compiling adler2 v2.0.1
[INFO] [stderr]    Compiling crc32fast v1.4.2
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling byteorder v1.5.0
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]    Compiling flate2 v1.1.2
[INFO] [stderr]    Compiling syn v2.0.102
[INFO] [stderr]    Compiling jobserver v0.1.33
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling cc v1.2.26
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling cmake v0.1.54
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.1
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling yoke v0.8.0
[INFO] [stderr]    Compiling zerovec v0.11.2
[INFO] [stderr]    Compiling zerotrie v0.2.2
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling tinystr v0.8.1
[INFO] [stderr]    Compiling potential_utf v0.1.2
[INFO] [stderr]    Compiling icu_collections v2.0.0
[INFO] [stderr]    Compiling icu_locale_core v2.0.0
[INFO] [stderr]    Compiling icu_provider v2.0.0
[INFO] [stderr]    Compiling icu_normalizer v2.0.0
[INFO] [stderr]    Compiling icu_properties v2.0.1
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling idna v1.0.3
[INFO] [stderr]    Compiling url v2.5.4
[INFO] [stderr]    Compiling rust-htslib v0.46.0
[INFO] [stderr]    Compiling vcfbub v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 9.45s
[INFO] running `Command { std: "docker" "inspect" "182586fae5fd7b691d88ef612774d4c8e9159b257743810633d49a05932d7baf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "182586fae5fd7b691d88ef612774d4c8e9159b257743810633d49a05932d7baf", kill_on_drop: false }`
[INFO] [stdout] 182586fae5fd7b691d88ef612774d4c8e9159b257743810633d49a05932d7baf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 07bd1d00fa6f5d55211cf33396320e5215b15ee631bf362e8e72faa474df5ef6
[INFO] running `Command { std: "docker" "start" "-a" "07bd1d00fa6f5d55211cf33396320e5215b15ee631bf362e8e72faa474df5ef6", kill_on_drop: false }`
[INFO] [stderr]    Compiling vcfbub v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.25s
[INFO] running `Command { std: "docker" "inspect" "07bd1d00fa6f5d55211cf33396320e5215b15ee631bf362e8e72faa474df5ef6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "07bd1d00fa6f5d55211cf33396320e5215b15ee631bf362e8e72faa474df5ef6", kill_on_drop: false }`
[INFO] [stdout] 07bd1d00fa6f5d55211cf33396320e5215b15ee631bf362e8e72faa474df5ef6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+1.91.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] c813529be4ac85be7b943f759f3ec5ba3f642c1377ea0084e67989500a4bac11
[INFO] running `Command { std: "docker" "start" "-a" "c813529be4ac85be7b943f759f3ec5ba3f642c1377ea0084e67989500a4bac11", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/vcfbub-27923766f6ec5716)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "c813529be4ac85be7b943f759f3ec5ba3f642c1377ea0084e67989500a4bac11", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c813529be4ac85be7b943f759f3ec5ba3f642c1377ea0084e67989500a4bac11", kill_on_drop: false }`
[INFO] [stdout] c813529be4ac85be7b943f759f3ec5ba3f642c1377ea0084e67989500a4bac11