[INFO] fetching crate openbabel-sys 0.5.4+openbabel-3.1.1...
[INFO] testing openbabel-sys-0.5.4+openbabel-3.1.1 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate openbabel-sys 0.5.4+openbabel-3.1.1 into /workspace/builds/worker-7-tc2/source
[INFO] started tweaking crates.io crate openbabel-sys 0.5.4+openbabel-3.1.1
[INFO] finished tweaking crates.io crate openbabel-sys 0.5.4+openbabel-3.1.1
[INFO] tweaked toml for crates.io crate openbabel-sys 0.5.4+openbabel-3.1.1 written to /workspace/builds/worker-7-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate openbabel-sys 0.5.4+openbabel-3.1.1 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 48 packages to latest compatible versions
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 54bd9455b936b90e9d1feb3e540a4afadb535cfa8a45f67b8d07205c97495155
[INFO] running `Command { std: "docker" "start" "-a" "54bd9455b936b90e9d1feb3e540a4afadb535cfa8a45f67b8d07205c97495155", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "54bd9455b936b90e9d1feb3e540a4afadb535cfa8a45f67b8d07205c97495155", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "54bd9455b936b90e9d1feb3e540a4afadb535cfa8a45f67b8d07205c97495155", kill_on_drop: false }`
[INFO] [stdout] 54bd9455b936b90e9d1feb3e540a4afadb535cfa8a45f67b8d07205c97495155
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d73b6154f03c163dd3d890b4da3f740982faaabbd9350c8df14f88c9262bad28
[INFO] running `Command { std: "docker" "start" "-a" "d73b6154f03c163dd3d890b4da3f740982faaabbd9350c8df14f88c9262bad28", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.2.39
[INFO] [stderr]    Compiling proc-macro2 v1.0.101
[INFO] [stderr]    Compiling equivalent v1.0.2
[INFO] [stderr]    Compiling hashbrown v0.16.0
[INFO] [stderr]    Compiling scratch v1.0.9
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]    Compiling cxxbridge-flags v1.0.186
[INFO] [stderr]    Compiling unicode-width v0.2.1
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling fs_extra v1.3.0
[INFO] [stderr]    Compiling foldhash v0.2.0
[INFO] [stderr]    Compiling codespan-reporting v0.12.0
[INFO] [stderr]    Compiling quote v1.0.41
[INFO] [stderr]    Compiling indexmap v2.11.4
[INFO] [stderr]    Compiling link-cplusplus v1.0.12
[INFO] [stderr]    Compiling cxx v1.0.186
[INFO] [stderr]    Compiling syn v2.0.106
[INFO] [stderr]    Compiling cxx-build v1.0.186
[INFO] [stderr]    Compiling cxxbridge-macro v1.0.186
[INFO] [stderr]    Compiling openbabel-sys v0.5.4+openbabel-3.1.1 (/opt/rustwide/workdir)
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector<OpenBabel::OBAtom*>&, std::vector<unsigned int>&, std::string&)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:32: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:17: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                           ^~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:13: note: 'snprintf' output between 11 and 56 bytes into a destination of size 11
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1710 |              ((ts->tm_year>=100)? ts->tm_year-100 : ts->tm_year),
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1711 |              ts->tm_hour, ts->tm_min);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:58: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                          ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:21: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:70: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                                      ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:29: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 25s
[INFO] running `Command { std: "docker" "inspect" "d73b6154f03c163dd3d890b4da3f740982faaabbd9350c8df14f88c9262bad28", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d73b6154f03c163dd3d890b4da3f740982faaabbd9350c8df14f88c9262bad28", kill_on_drop: false }`
[INFO] [stdout] d73b6154f03c163dd3d890b4da3f740982faaabbd9350c8df14f88c9262bad28
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d0b3f18a875682a05c840a68e41ee9809cc6b767e27427d75e897cd25e7326fb
[INFO] running `Command { std: "docker" "start" "-a" "d0b3f18a875682a05c840a68e41ee9809cc6b767e27427d75e897cd25e7326fb", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.176
[INFO] [stderr]    Compiling rustix v1.1.2
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]    Compiling bitflags v2.9.4
[INFO] [stderr]    Compiling cfg-if v1.0.3
[INFO] [stderr]    Compiling linux-raw-sys v0.11.0
[INFO] [stderr]    Compiling once_cell v1.21.3
[INFO] [stderr]    Compiling fastrand v2.3.0
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector<OpenBabel::OBAtom*>&, std::vector<unsigned int>&, std::string&)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:32: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:17: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                           ^~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:13: note: 'snprintf' output between 11 and 56 bytes into a destination of size 11
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1710 |              ((ts->tm_year>=100)? ts->tm_year-100 : ts->tm_year),
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1711 |              ts->tm_hour, ts->tm_min);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:58: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                          ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:21: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:70: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                                      ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:29: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]    Compiling tempfile v3.23.0
[INFO] [stderr]    Compiling openbabel-sys v0.5.4+openbabel-3.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 4.97s
[INFO] running `Command { std: "docker" "inspect" "d0b3f18a875682a05c840a68e41ee9809cc6b767e27427d75e897cd25e7326fb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d0b3f18a875682a05c840a68e41ee9809cc6b767e27427d75e897cd25e7326fb", kill_on_drop: false }`
[INFO] [stdout] d0b3f18a875682a05c840a68e41ee9809cc6b767e27427d75e897cd25e7326fb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 66d943760adc84d09488fe951ce5716d9dcdc9a66ca662816161153bb15f24c5
[INFO] running `Command { std: "docker" "start" "-a" "66d943760adc84d09488fe951ce5716d9dcdc9a66ca662816161153bb15f24c5", kill_on_drop: false }`
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp: In member function 'bool OpenBabel::OBMol2Cansmi::GetSmilesElement(OpenBabel::OBCanSmiNode*, std::vector<OpenBabel::OBAtom*>&, std::vector<unsigned int>&, std::string&)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2857:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2857 |           snprintf(tcount, 10, "%d", i);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:35: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                   ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2865:19: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2865 |           snprintf(tcount, 10, "%d", hcount);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:32: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/smilesformat.cpp:2881:17: note: 'snprintf' output between 2 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  2881 |         snprintf(tchar, 10, "%d", abs(charge));
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |         ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp: In member function 'std::string OpenBabel::MDLFormat::GetTimeDate()':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:27: warning: '%02d' directive output may be truncated writing between 2 and 11 bytes into a region of size between 0 and 9 [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                           ^~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/mdlformat.cpp:1709:13: note: 'snprintf' output between 11 and 56 bytes into a destination of size 11
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1709 |     snprintf(td, 11, "%02d%02d%02d%02d%02d", ts->tm_mon+1, ts->tm_mday,
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1710 |              ((ts->tm_year>=100)? ts->tm_year-100 : ts->tm_year),
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:  1711 |              ts->tm_hour, ts->tm_min);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |              ~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp: In member function 'virtual bool OpenBabel::PDBFormat::WriteMolecule(OpenBabel::OBBase*, OpenBabel::OBConversion*)':
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:58: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                          ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:684:21: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   684 |             snprintf(type_name, sizeof(type_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:70: warning: 'snprintf' output may be truncated before the last format character [-Wformat-truncation=]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                                                                      ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/formats/pdbformat.cpp:702:29: note: 'snprintf' output between 5 and 11 bytes into a destination of size 10
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   702 |                     snprintf(padded_name, sizeof(padded_name), " %-3s", tmp);
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: At global scope:
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: openbabel/src/mcdlutil.cpp:423:5: warning: multi-line comment [-Wcomment]
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:   423 |     //                             /     \
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1:       |     ^
[INFO] [stderr] warning: openbabel-sys@0.5.4+openbabel-3.1.1: cc1plus: note: unrecognized command-line option '-Wno-unused-private-field' may have been intended to silence earlier diagnostics
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.09s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/openbabel_sys-fd9b8fc33d15bee1)
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stdout] test tests::test::test_smarts_pattern ... ok
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open parameter file
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open parameter file
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stdout] test tests::test::test_read_from_str ... ok
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open parameter file
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stdout] test tests::test::test_mol ... ok
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ReadPatternFile
[INFO] [stderr]   Cannot open patterns.txt
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ReadPatternFile
[INFO] [stderr]   Cannot open SMARTS_InteLigand.txt
[INFO] [stderr] 
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in ParseParamFile
[INFO] [stderr]   Cannot open UFF.prm
[INFO] [stderr] ==============================
[INFO] [stderr] *** Open Babel Error  in SetTypes
[INFO] [stderr]   Cannot open UFF.prm
[INFO] [stderr] ==============================
[INFO] [stdout] test tests::test::test_fingerprint ... ok
[INFO] [stderr] *** Open Babel Error  in OBForceField_setup
[INFO] [stdout] test tests::test::test_is_setup_needed ... ok
[INFO] [stderr]   OBForceField->Setup() error
[INFO] [stderr] 
[INFO] [stderr] munmap_chunk(): invalid pointer
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/deps/openbabel_sys-fd9b8fc33d15bee1` (signal: 6, SIGABRT: process abort signal)
[INFO] running `Command { std: "docker" "inspect" "66d943760adc84d09488fe951ce5716d9dcdc9a66ca662816161153bb15f24c5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "66d943760adc84d09488fe951ce5716d9dcdc9a66ca662816161153bb15f24c5", kill_on_drop: false }`
[INFO] [stdout] 66d943760adc84d09488fe951ce5716d9dcdc9a66ca662816161153bb15f24c5
