[INFO] fetching crate tskit_rust 0.1.0...
[INFO] testing tskit_rust-0.1.0 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate tskit_rust 0.1.0 into /workspace/builds/worker-3-tc2/source
[INFO] started tweaking crates.io crate tskit_rust 0.1.0
[INFO] finished tweaking crates.io crate tskit_rust 0.1.0
[INFO] tweaked toml for crates.io crate tskit_rust 0.1.0 written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate tskit_rust 0.1.0 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 55 packages to latest compatible versions
[INFO] [stderr]       Adding bindgen v0.56.0 (available: v0.72.1)
[INFO] [stderr]       Adding thiserror v1.0.69 (available: v2.0.17)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 57952d82836bae081dbefd060c75d1a493fbb263b91e8634196329c884f5715d
[INFO] running `Command { std: "docker" "start" "-a" "57952d82836bae081dbefd060c75d1a493fbb263b91e8634196329c884f5715d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "57952d82836bae081dbefd060c75d1a493fbb263b91e8634196329c884f5715d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "57952d82836bae081dbefd060c75d1a493fbb263b91e8634196329c884f5715d", kill_on_drop: false }`
[INFO] [stdout] 57952d82836bae081dbefd060c75d1a493fbb263b91e8634196329c884f5715d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9363418d8cff0ee851a3f65d24ef99b03be022052d68f3b34678df6f4b6ef0c0
[INFO] running `Command { std: "docker" "start" "-a" "9363418d8cff0ee851a3f65d24ef99b03be022052d68f3b34678df6f4b6ef0c0", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.7.6
[INFO] [stderr]    Compiling glob v0.3.3
[INFO] [stderr]    Compiling regex-syntax v0.8.6
[INFO] [stderr]    Compiling unicode-width v0.1.14
[INFO] [stderr]    Compiling humantime v2.3.0
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling log v0.4.28
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling nom v5.1.3
[INFO] [stderr]    Compiling libloading v0.8.9
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling bindgen v0.56.0
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling which v3.1.1
[INFO] [stderr]    Compiling shlex v0.1.1
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling peeking_take_while v0.1.2
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling cc v1.2.39
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling cexpr v0.4.0
[INFO] [stderr]    Compiling regex-automata v0.4.11
[INFO] [stderr]    Compiling regex v1.11.3
[INFO] [stderr]    Compiling env_logger v0.8.4
[INFO] [stderr]    Compiling tskit_rust v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr] error: failed to run custom build command for `tskit_rust v0.1.0 (/opt/rustwide/workdir)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/tskit_rust-e1576509ddef89e9/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   OUT_DIR = Some(/opt/rustwide/target/debug/build/tskit_rust-0c97f3f5b1d70a93/out)
[INFO] [stderr]   OPT_LEVEL = Some(0)
[INFO] [stderr]   TARGET = Some(x86_64-unknown-linux-gnu)
[INFO] [stderr]   HOST = Some(x86_64-unknown-linux-gnu)
[INFO] [stderr]   cargo:rerun-if-env-changed=CC_x86_64-unknown-linux-gnu
[INFO] [stderr]   CC_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CC_x86_64_unknown_linux_gnu
[INFO] [stderr]   CC_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=HOST_CC
[INFO] [stderr]   HOST_CC = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CC
[INFO] [stderr]   CC = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CC_ENABLE_DEBUG_OUTPUT
[INFO] [stderr]   RUSTC_WRAPPER = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CRATE_CC_NO_DEFAULTS
[INFO] [stderr]   CRATE_CC_NO_DEFAULTS = None
[INFO] [stderr]   DEBUG = Some(true)
[INFO] [stderr]   CARGO_CFG_TARGET_FEATURE = Some(fxsr,sse,sse2)
[INFO] [stderr]   cargo:rerun-if-env-changed=CFLAGS
[INFO] [stderr]   CFLAGS = None
[INFO] [stderr]   cargo:rerun-if-env-changed=HOST_CFLAGS
[INFO] [stderr]   HOST_CFLAGS = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CFLAGS_x86_64_unknown_linux_gnu
[INFO] [stderr]   CFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=CFLAGS_x86_64-unknown-linux-gnu
[INFO] [stderr]   CFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   CARGO_ENCODED_RUSTFLAGS = Some(--cap-lints=warn)
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   exit status: 0
[INFO] [stderr]   cargo:rerun-if-env-changed=AR_x86_64-unknown-linux-gnu
[INFO] [stderr]   AR_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=AR_x86_64_unknown_linux_gnu
[INFO] [stderr]   AR_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=HOST_AR
[INFO] [stderr]   HOST_AR = None
[INFO] [stderr]   cargo:rerun-if-env-changed=AR
[INFO] [stderr]   AR = None
[INFO] [stderr]   cargo:rerun-if-env-changed=ARFLAGS
[INFO] [stderr]   ARFLAGS = None
[INFO] [stderr]   cargo:rerun-if-env-changed=HOST_ARFLAGS
[INFO] [stderr]   HOST_ARFLAGS = None
[INFO] [stderr]   cargo:rerun-if-env-changed=ARFLAGS_x86_64_unknown_linux_gnu
[INFO] [stderr]   ARFLAGS_x86_64_unknown_linux_gnu = None
[INFO] [stderr]   cargo:rerun-if-env-changed=ARFLAGS_x86_64-unknown-linux-gnu
[INFO] [stderr]   ARFLAGS_x86_64-unknown-linux-gnu = None
[INFO] [stderr]   cargo:rustc-link-lib=static=tskit
[INFO] [stderr]   cargo:rustc-link-search=native=/opt/rustwide/target/debug/build/tskit_rust-0c97f3f5b1d70a93/out
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/core.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/math.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/libc-header-start.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features-time64.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/timesize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/stdc-predef.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/sys/cdefs.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/long-double.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/gnu/stubs.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/gnu/stubs-64.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/timesize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/typesizes.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/time64.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/math-vector.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/libm-simd-decl-stubs.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/floatn.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/floatn-common.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/long-double.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/flt-eval-method.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/fp-logb.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/fp-fast.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls-helper-functions.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls-helper-functions.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls-helper-functions.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/mathcalls.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdbool.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdint.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/stdint.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/libc-header-start.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wchar.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/stdint-intn.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/stdint-uintn.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/stdint-least.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/stdio.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/libc-header-start.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stddef.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_size_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_null.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdarg.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stdarg___gnuc_va_list.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/__fpos_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/__mbstate_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/__fpos64_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/__mbstate_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/__FILE.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/FILE.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/struct_FILE.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types/cookie_io_functions_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/types.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/stdio_lim.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/floatn.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/limits.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/limits.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/libc-header-start.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/features.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/posix1_lim.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/wordsize.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/local_lim.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/linux/limits.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/pthread_stack_min-dynamic.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/pthread_stack_min.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/x86_64-linux-gnu/bits/posix2_lim.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/trees.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/tables.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/stdio.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdbool.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdint.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/kastore/kastore.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdbool.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stdint.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/stddef.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_ptrdiff_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_size_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_wchar_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_null.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_max_align_t.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/lib/llvm-18/lib/clang/18/include/__stddef_offsetof.h
[INFO] [stderr]   cargo:rerun-if-changed=/usr/include/stdio.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/core.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/genotypes.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/trees.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/convert.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/trees.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/stats.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/trees.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/haplotype_matching.h
[INFO] [stderr]   cargo:rerun-if-changed=subprojects/tskit/tskit/trees.h
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (526) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/bindgen-0.56.0/src/ir/context.rs:846:9:
[INFO] [stderr]   "tsk_table_collection_t_struct_(unnamed_at_subprojects/tskit/tskit/tables_h_589_5)" is not a valid Ident
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x62acbf11e142 - std::backtrace_rs::backtrace::libunwind::trace::hcab59e1e990fdc24
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x62acbf11e142 - std::backtrace_rs::backtrace::trace_unsynchronized::he24cc57f3d2f47b7
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x62acbf11e142 - std::sys::backtrace::_print_fmt::hf8d65ede198eeb54
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:66:9
[INFO] [stderr]      3:     0x62acbf11e142 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h67edf0e4d33c343c
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:39:26
[INFO] [stderr]      4:     0x62acbf1301cf - core::fmt::rt::Argument::fmt::hef94184842aeafdd
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/fmt/rt.rs:173:76
[INFO] [stderr]      5:     0x62acbf1301cf - core::fmt::write::hcf0c66b48a8fa606
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/fmt/mod.rs:1468:25
[INFO] [stderr]      6:     0x62acbf0e76d1 - std::io::default_write_fmt::h1ecb8c7cfa7da481
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x62acbf0e76d1 - std::io::Write::write_fmt::h051fe4a9e4fdbf48
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/io/mod.rs:1954:13
[INFO] [stderr]      8:     0x62acbf0f4ef2 - std::sys::backtrace::BacktraceLock::print::h07e5435aa717b414
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:42:9
[INFO] [stderr]      9:     0x62acbf0fa82f - std::panicking::default_hook::{{closure}}::h91001850288db5f7
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:301:27
[INFO] [stderr]     10:     0x62acbf0fa689 - std::panicking::default_hook::h2346dbb704ef5512
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:328:9
[INFO] [stderr]     11:     0x62acbf0faf65 - std::panicking::panic_with_hook::hd2b063a6090d23a4
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:834:13
[INFO] [stderr]     12:     0x62acbf0fad4a - std::panicking::panic_handler::{{closure}}::he666d95f139a333e
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:707:13
[INFO] [stderr]     13:     0x62acbf0f5029 - std::sys::backtrace::__rust_end_short_backtrace::h631ad224854ebee5
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:174:18
[INFO] [stderr]     14:     0x62acbf0db6fd - __rustc[1d67440d6e82e4f]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:698:5
[INFO] [stderr]     15:     0x62acbf13a710 - core::panicking::panic_fmt::h420ddb7fd73daf53
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panicking.rs:75:14
[INFO] [stderr]     16:     0x62acbf0b742f - proc_macro2::fallback::validate_ident::h52123bc591f951e3
[INFO] [stderr]     17:     0x62acbf0b7b58 - proc_macro2::fallback::Ident::new_checked::ha7809f8049b2d3ed
[INFO] [stderr]     18:     0x62acbf0bd4c2 - proc_macro2::imp::Ident::new_checked::h107d83e6e43bc436
[INFO] [stderr]     19:     0x62acbf0cb8b7 - proc_macro2::Ident::new::hc43f726c0da57b4e
[INFO] [stderr]     20:     0x62acbecf4116 - bindgen::ir::context::BindgenContext::rust_ident_raw::h90394a5bd5f875c6
[INFO] [stderr]     21:     0x62acbecf2080 - bindgen::ir::context::BindgenContext::rust_ident::hf9fa16850d87ba9d
[INFO] [stderr]     22:     0x62acbed59ff0 - <bindgen::ir::comp::CompInfo as bindgen::codegen::CodeGenerator>::codegen::hd25f42815818495f
[INFO] [stderr]     23:     0x62acbecbc6e5 - <bindgen::ir::ty::Type as bindgen::codegen::CodeGenerator>::codegen::hfe3de20574d74eaf
[INFO] [stderr]     24:     0x62acbed1f097 - <bindgen::ir::item::Item as bindgen::codegen::CodeGenerator>::codegen::hbf97fce6557f6041
[INFO] [stderr]     25:     0x62acbed602c8 - <bindgen::ir::comp::CompInfo as bindgen::codegen::CodeGenerator>::codegen::hd25f42815818495f
[INFO] [stderr]     26:     0x62acbecbc6e5 - <bindgen::ir::ty::Type as bindgen::codegen::CodeGenerator>::codegen::hfe3de20574d74eaf
[INFO] [stderr]     27:     0x62acbed1f097 - <bindgen::ir::item::Item as bindgen::codegen::CodeGenerator>::codegen::hbf97fce6557f6041
[INFO] [stderr]     28:     0x62acbec604b5 - <bindgen::ir::module::Module as bindgen::codegen::CodeGenerator>::codegen::{{closure}}::h7f3cab89c75e5285
[INFO] [stderr]     29:     0x62acbec3a78f - <bindgen::ir::module::Module as bindgen::codegen::CodeGenerator>::codegen::h114b238574df25c6
[INFO] [stderr]     30:     0x62acbed1f06f - <bindgen::ir::item::Item as bindgen::codegen::CodeGenerator>::codegen::hbf97fce6557f6041
[INFO] [stderr]     31:     0x62acbec6f43d - bindgen::codegen::codegen::{{closure}}::he1fefc3b0b9a064f
[INFO] [stderr]     32:     0x62acbecffd48 - bindgen::ir::context::BindgenContext::gen::h84fb0b47a3f2c5e0
[INFO] [stderr]     33:     0x62acbec6eb7d - bindgen::codegen::codegen::haa823721ab10055f
[INFO] [stderr]     34:     0x62acbed44bac - bindgen::Bindings::generate::h73d233c62b0569ce
[INFO] [stderr]     35:     0x62acbed41671 - bindgen::Builder::generate::h991ec9d02506a136
[INFO] [stderr]     36:     0x62acbeb85c1c - build_script_build::main::hb6defc07a5fc77f5
[INFO] [stderr]     37:     0x62acbeb86713 - core::ops::function::FnOnce::call_once::h602a0d0f67f841f1
[INFO] [stderr]     38:     0x62acbeb86666 - std::sys::backtrace::__rust_begin_short_backtrace::hba32d314610fa42e
[INFO] [stderr]     39:     0x62acbeb86649 - std::rt::lang_start::{{closure}}::hccadc623931e6280
[INFO] [stderr]     40:     0x62acbf0e93a0 - core::ops::function::impls::<impl core::ops::function::FnOnce<A> for &F>::call_once::h4967fb77e0dfb65c
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     41:     0x62acbf0e93a0 - std::panicking::catch_unwind::do_call::hf7e87675c3e14c23
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:590:40
[INFO] [stderr]     42:     0x62acbf0e93a0 - std::panicking::catch_unwind::h26f0e342004b5114
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:553:19
[INFO] [stderr]     43:     0x62acbf0e93a0 - std::panic::catch_unwind::h9ee33ca17775d897
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panic.rs:359:14
[INFO] [stderr]     44:     0x62acbf0e93a0 - std::rt::lang_start_internal::{{closure}}::h243ba3495fa13cf8
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/rt.rs:175:24
[INFO] [stderr]     45:     0x62acbf0e93a0 - std::panicking::catch_unwind::do_call::h819db0a7788e7259
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:590:40
[INFO] [stderr]     46:     0x62acbf0e93a0 - std::panicking::catch_unwind::h23e08fb4a7b9f405
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:553:19
[INFO] [stderr]     47:     0x62acbf0e93a0 - std::panic::catch_unwind::h7ca3d9eabb6135ff
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panic.rs:359:14
[INFO] [stderr]     48:     0x62acbf0e93a0 - std::rt::lang_start_internal::h06ad7395f4fda8d7
[INFO] [stderr]                                  at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/rt.rs:171:5
[INFO] [stderr]     49:     0x62acbeb86631 - std::rt::lang_start::hd6963d5b79a026bc
[INFO] [stderr]     50:     0x62acbeb87ac5 - main
[INFO] [stderr]     51:     0x7482cdcb71ca - <unknown>
[INFO] [stderr]     52:     0x7482cdcb728b - __libc_start_main
[INFO] [stderr]     53:     0x62acbeb854d5 - _start
[INFO] [stderr]     54:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "9363418d8cff0ee851a3f65d24ef99b03be022052d68f3b34678df6f4b6ef0c0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9363418d8cff0ee851a3f65d24ef99b03be022052d68f3b34678df6f4b6ef0c0", kill_on_drop: false }`
[INFO] [stdout] 9363418d8cff0ee851a3f65d24ef99b03be022052d68f3b34678df6f4b6ef0c0
