[INFO] fetching crate exon-py 0.11.0...
[INFO] testing exon-py-0.11.0 against 1.90.0 for beta-1.91-3
[INFO] extracting crate exon-py 0.11.0 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate exon-py 0.11.0
[INFO] finished tweaking crates.io crate exon-py 0.11.0
[INFO] tweaked toml for crates.io crate exon-py 0.11.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate exon-py 0.11.0 on toolchain 1.90.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 464 packages to latest compatible versions
[INFO] [stderr]       Adding arrow v50.0.0 (available: v56.2.0)
[INFO] [stderr]       Adding async-compression v0.4.19 (available: v0.4.32)
[INFO] [stderr]       Adding datafusion v36.0.0 (available: v50.0.0)
[INFO] [stderr]       Adding exon v0.11.1 (available: v0.32.4)
[INFO] [stderr]       Adding libloading v0.8.8 (available: v0.8.9)
[INFO] [stderr]       Adding pyo3 v0.20.3 (available: v0.26.0)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded pyo3-macros v0.20.3
[INFO] [stderr]   Downloaded arrow-row v50.0.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.26.0
[INFO] [stderr]   Downloaded aws-smithy-http-client v1.1.1
[INFO] [stderr]   Downloaded exon-bam v0.11.1
[INFO] [stderr]   Downloaded exon-fasta v0.11.1
[INFO] [stderr]   Downloaded aws-smithy-xml v0.60.10
[INFO] [stderr]   Downloaded arrow-json v50.0.0
[INFO] [stderr]   Downloaded aws-smithy-runtime v1.9.2
[INFO] [stderr]   Downloaded aws-lc-rs v1.14.1
[INFO] [stderr]   Downloaded brotli-decompressor v2.5.1
[INFO] [stderr]   Downloaded chrono-tz v0.8.6
[INFO] [stderr]   Downloaded datafusion-common v36.0.0
[INFO] [stderr]   Downloaded datafusion-expr v36.0.0
[INFO] [stderr]   Downloaded arrow-array v50.0.0
[INFO] [stderr]   Downloaded aws-smithy-runtime-api v1.9.0
[INFO] [stderr]   Downloaded parquet v50.0.0
[INFO] [stderr]   Downloaded aws-sdk-sso v1.84.0
[INFO] [stderr]   Downloaded arrow v50.0.0
[INFO] [stderr]   Downloaded libdeflate-sys v1.24.0
[INFO] [stderr]   Downloaded sqlparser v0.43.1
[INFO] [stderr]   Downloaded datafusion v36.0.0
[INFO] [stderr]   Downloaded noodles-cram v0.56.0
[INFO] [stderr]   Downloaded arrow-ipc v50.0.0
[INFO] [stderr]   Downloaded aws-sdk-sts v1.86.0
[INFO] [stderr]   Downloaded datafusion-physical-expr v36.0.0
[INFO] [stderr]   Downloaded aws-sdk-ssooidc v1.86.0
[INFO] [stderr]   Downloaded noodles-vcf v0.49.0
[INFO] [stderr]   Downloaded arrow-cast v50.0.0
[INFO] [stderr]   Downloaded noodles-bcf v0.46.0
[INFO] [stderr]   Downloaded aws-smithy-json v0.61.5
[INFO] [stderr]   Downloaded aws-smithy-http v0.62.3
[INFO] [stderr]   Downloaded aws-smithy-observability v0.1.3
[INFO] [stderr]   Downloaded exon-fcs v0.11.1
[INFO] [stderr]   Downloaded aws-sigv4 v1.3.4
[INFO] [stderr]   Downloaded security-framework v3.5.1
[INFO] [stderr]   Downloaded noodles-sam v0.53.0
[INFO] [stderr]   Downloaded aws-config v1.8.6
[INFO] [stderr]   Downloaded datafusion-optimizer v36.0.0
[INFO] [stderr]   Downloaded async-compression v0.4.19
[INFO] [stderr]   Downloaded regex-lite v0.1.7
[INFO] [stderr]   Downloaded aws-smithy-types v1.3.2
[INFO] [stderr]   Downloaded aws-runtime v1.5.10
[INFO] [stderr]   Downloaded aws-types v1.3.8
[INFO] [stderr]   Downloaded bytes-utils v0.1.4
[INFO] [stderr]   Downloaded datafusion-physical-plan v36.0.0
[INFO] [stderr]   Downloaded exon-sam v0.11.1
[INFO] [stderr]   Downloaded datafusion-execution v36.0.0
[INFO] [stderr]   Downloaded arrow-arith v50.0.0
[INFO] [stderr]   Downloaded arrow-csv v50.0.0
[INFO] [stderr]   Downloaded datafusion-sql v36.0.0
[INFO] [stderr]   Downloaded arrow-buffer v50.0.0
[INFO] [stderr]   Downloaded sqlparser_derive v0.2.2
[INFO] [stderr]   Downloaded noodles-gff v0.27.0
[INFO] [stderr]   Downloaded noodles-gtf v0.23.0
[INFO] [stderr]   Downloaded noodles-tabix v0.36.0
[INFO] [stderr]   Downloaded pyo3 v0.20.3
[INFO] [stderr]   Downloaded exon-genbank v0.11.1
[INFO] [stderr]   Downloaded exon-gff v0.11.1
[INFO] [stderr]   Downloaded exon-gtf v0.11.1
[INFO] [stderr]   Downloaded aws-smithy-query v0.60.7
[INFO] [stderr]   Downloaded xmlparser v0.13.6
[INFO] [stderr]   Downloaded tokio-rustls v0.26.4
[INFO] [stderr]   Downloaded aws-smithy-async v1.2.5
[INFO] [stderr]   Downloaded aws-credential-types v1.2.6
[INFO] [stderr]   Downloaded exon-io v0.11.1
[INFO] [stderr]   Downloaded exon-mzml v0.11.1
[INFO] [stderr]   Downloaded datafusion-functions v36.0.0
[INFO] [stderr]   Downloaded datafusion-functions-array v36.0.0
[INFO] [stderr]   Downloaded arrow-ord v50.0.0
[INFO] [stderr]   Downloaded arrow-string v50.0.0
[INFO] [stderr]   Downloaded arrow-data v50.0.0
[INFO] [stderr]   Downloaded arrow-schema v50.0.0
[INFO] [stderr]   Downloaded arrow-select v50.0.0
[INFO] [stderr]   Downloaded exon-vcf v0.11.1
[INFO] [stderr]   Downloaded noodles-bed v0.12.0
[INFO] [stderr]   Downloaded noodles-fasta v0.33.0
[INFO] [stderr]   Downloaded noodles-core v0.14.0
[INFO] [stderr]   Downloaded noodles-csi v0.30.0
[INFO] [stderr]   Downloaded noodles v0.65.0
[INFO] [stderr]   Downloaded libdeflater v1.24.0
[INFO] [stderr]   Downloaded exon-bcf v0.11.1
[INFO] [stderr]   Downloaded exon-bed v0.11.1
[INFO] [stderr]   Downloaded exon-fastq v0.11.1
[INFO] [stderr]   Downloaded chrono-tz-build v0.2.1
[INFO] [stderr]   Downloaded exon-common v0.11.1
[INFO] [stderr]   Downloaded noodles-bam v0.56.0
[INFO] [stderr]   Downloaded quick-xml v0.31.0
[INFO] [stderr]   Downloaded noodles-fastq v0.10.0
[INFO] [stderr]   Downloaded object_store v0.9.1
[INFO] [stderr]   Downloaded exon v0.11.1
[INFO] [stderr]   Downloaded pyo3-ffi v0.20.3
[INFO] [stderr]   Downloaded pyo3-build-config v0.20.3
[INFO] [stderr]   Downloaded brotli v3.5.0
[INFO] [stderr]   Downloaded pyo3-macros-backend v0.20.3
[INFO] [stderr]   Downloaded aws-lc-sys v0.32.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3584a4c1eef7f2b2af2febb399e956707233f7c3e91ea8148e626adccaa9016c
[INFO] running `Command { std: "docker" "start" "-a" "3584a4c1eef7f2b2af2febb399e956707233f7c3e91ea8148e626adccaa9016c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3584a4c1eef7f2b2af2febb399e956707233f7c3e91ea8148e626adccaa9016c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3584a4c1eef7f2b2af2febb399e956707233f7c3e91ea8148e626adccaa9016c", kill_on_drop: false }`
[INFO] [stdout] 3584a4c1eef7f2b2af2febb399e956707233f7c3e91ea8148e626adccaa9016c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3b19d5b3f256097f94102fd20da413ac219a51802c38f948d666b4421c9b6210
[INFO] running `Command { std: "docker" "start" "-a" "3b19d5b3f256097f94102fd20da413ac219a51802c38f948d666b4421c9b6210", kill_on_drop: false }`
[INFO] [stderr]    Compiling memchr v2.7.6
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling jobserver v0.1.34
[INFO] [stderr]    Compiling serde_core v1.0.228
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling phf_shared v0.11.3
[INFO] [stderr]    Compiling futures-macro v0.3.31
[INFO] [stderr]    Compiling tokio v1.47.1
[INFO] [stderr]    Compiling parse-zoneinfo v0.3.1
[INFO] [stderr]    Compiling ahash v0.8.12
[INFO] [stderr]    Compiling semver v1.0.27
[INFO] [stderr]    Compiling iana-time-zone v0.1.64
[INFO] [stderr]    Compiling crc32fast v1.5.0
[INFO] [stderr]    Compiling lexical-util v0.8.5
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling target-lexicon v0.12.16
[INFO] [stderr]    Compiling phf_generator v0.11.3
[INFO] [stderr]    Compiling phf v0.11.3
[INFO] [stderr]    Compiling cc v1.2.39
[INFO] [stderr]    Compiling rustc_version v0.4.1
[INFO] [stderr]    Compiling phf_codegen v0.11.3
[INFO] [stderr]    Compiling flate2 v1.1.2
[INFO] [stderr]    Compiling digest v0.10.7
[INFO] [stderr]    Compiling arrow-schema v50.0.0
[INFO] [stderr]    Compiling form_urlencoded v1.2.2
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling chrono-tz-build v0.2.1
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling futures-util v0.3.31
[INFO] [stderr]    Compiling half v2.6.0
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling num-bigint v0.4.6
[INFO] [stderr]    Compiling num-iter v0.1.45
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling icu_provider v2.0.0
[INFO] [stderr]    Compiling lexical-write-integer v0.8.5
[INFO] [stderr]    Compiling lexical-parse-integer v0.8.6
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling pyo3-build-config v0.20.3
[INFO] [stderr]    Compiling chrono-tz v0.8.6
[INFO] [stderr]    Compiling rustversion v1.0.22
[INFO] [stderr]    Compiling lexical-write-float v0.8.5
[INFO] [stderr]    Compiling lexical-parse-float v0.8.5
[INFO] [stderr]    Compiling icu_properties v2.0.1
[INFO] [stderr]    Compiling icu_normalizer v2.0.0
[INFO] [stderr]    Compiling unicode-width v0.2.1
[INFO] [stderr]    Compiling flatbuffers v23.5.26
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling comfy-table v7.2.1
[INFO] [stderr]    Compiling memoffset v0.9.1
[INFO] [stderr]    Compiling lexical-core v0.8.5
[INFO] [stderr]    Compiling twox-hash v2.1.2
[INFO] [stderr]    Compiling portable-atomic v1.11.1
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling lz4_flex v0.11.5
[INFO] [stderr]    Compiling md-5 v0.10.6
[INFO] [stderr]    Compiling csv-core v0.1.12
[INFO] [stderr]    Compiling ring v0.17.14
[INFO] [stderr]    Compiling num v0.4.3
[INFO] [stderr]    Compiling arrow-buffer v50.0.0
[INFO] [stderr]    Compiling zstd-sys v2.0.16+zstd.1.5.7
[INFO] [stderr]    Compiling pyo3-macros-backend v0.20.3
[INFO] [stderr]    Compiling async-trait v0.1.89
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling snap v1.1.1
[INFO] [stderr]    Compiling arrow-data v50.0.0
[INFO] [stderr]    Compiling pyo3-ffi v0.20.3
[INFO] [stderr]    Compiling pyo3 v0.20.3
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling futures-executor v0.3.31
[INFO] [stderr]    Compiling futures v0.3.31
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling regex-automata v0.4.11
[INFO] [stderr]    Compiling brotli-decompressor v2.5.1
[INFO] [stderr]    Compiling ordered-float v2.10.1
[INFO] [stderr]    Compiling unindent v0.2.4
[INFO] [stderr]    Compiling integer-encoding v3.0.4
[INFO] [stderr]    Compiling indoc v2.0.6
[INFO] [stderr]    Compiling sha2 v0.10.9
[INFO] [stderr]    Compiling thrift v0.17.0
[INFO] [stderr]    Compiling chrono v0.4.42
[INFO] [stderr]    Compiling url v2.5.7
[INFO] [stderr]    Compiling serde_urlencoded v0.7.1
[INFO] [stderr]    Compiling csv v1.3.1
[INFO] [stderr]    Compiling brotli v3.5.0
[INFO] [stderr]    Compiling twox-hash v1.6.3
[INFO] [stderr]    Compiling sqlparser_derive v0.2.2
[INFO] [stderr]    Compiling seq-macro v0.3.6
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling libdeflate-sys v1.24.0
[INFO] [stderr]    Compiling uuid v1.18.1
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling sqlparser v0.43.1
[INFO] [stderr]    Compiling zeroize v1.8.2
[INFO] [stderr]    Compiling pyo3-macros v0.20.3
[INFO] [stderr]    Compiling dashmap v5.5.3
[INFO] [stderr]    Compiling tokio-util v0.7.16
[INFO] [stderr]    Compiling snafu-derive v0.7.5
[INFO] [stderr]    Compiling quick-xml v0.31.0
[INFO] [stderr]    Compiling rustls v0.21.12
[INFO] [stderr]    Compiling noodles-core v0.14.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling h2 v0.3.27
[INFO] [stderr]    Compiling regex v1.11.3
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling blake3 v1.8.2
[INFO] [stderr] error: could not compile `tokio` (lib)
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/1.90.0-x86_64-unknown-linux-gnu/bin/rustc --crate-name tokio --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/tokio-1.47.1/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --warn=unexpected_cfgs --check-cfg 'cfg(fuzzing)' --check-cfg 'cfg(loom)' --check-cfg 'cfg(mio_unsupported_force_poll_poll)' --check-cfg 'cfg(tokio_allow_from_blocking_fd)' --check-cfg 'cfg(tokio_internal_mt_counters)' --check-cfg 'cfg(tokio_no_parking_lot)' --check-cfg 'cfg(tokio_no_tuning_tests)' --check-cfg 'cfg(tokio_taskdump)' --check-cfg 'cfg(tokio_unstable)' --check-cfg 'cfg(tokio_uring)' --check-cfg 'cfg(target_os, values("cygwin"))' --cfg 'feature="bytes"' --cfg 'feature="default"' --cfg 'feature="fs"' --cfg 'feature="full"' --cfg 'feature="io-std"' --cfg 'feature="io-util"' --cfg 'feature="libc"' --cfg 'feature="macros"' --cfg 'feature="mio"' --cfg 'feature="net"' --cfg 'feature="parking_lot"' --cfg 'feature="process"' --cfg 'feature="rt"' --cfg 'feature="rt-multi-thread"' --cfg 'feature="signal"' --cfg 'feature="signal-hook-registry"' --cfg 'feature="socket2"' --cfg 'feature="sync"' --cfg 'feature="time"' --cfg 'feature="tokio-macros"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("bytes", "default", "fs", "full", "io-std", "io-util", "libc", "macros", "mio", "net", "parking_lot", "process", "rt", "rt-multi-thread", "signal", "signal-hook-registry", "socket2", "sync", "test-util", "time", "tokio-macros", "tracing", "windows-sys"))' -C metadata=c9b414046bf502cf -C extra-filename=-251199d7e013c43b --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern bytes=/opt/rustwide/target/debug/deps/libbytes-e08a006c583c3ac6.rmeta --extern libc=/opt/rustwide/target/debug/deps/liblibc-08aef465eb552f81.rmeta --extern mio=/opt/rustwide/target/debug/deps/libmio-73093c37e39b2bb4.rmeta --extern parking_lot=/opt/rustwide/target/debug/deps/libparking_lot-c8f67e24714eb85d.rmeta --extern pin_project_lite=/opt/rustwide/target/debug/deps/libpin_project_lite-0cffc5d959d0b16f.rmeta --extern signal_hook_registry=/opt/rustwide/target/debug/deps/libsignal_hook_registry-18d8346e5d1190e3.rmeta --extern socket2=/opt/rustwide/target/debug/deps/libsocket2-0d4b8422b42bb7e5.rmeta --extern tokio_macros=/opt/rustwide/target/debug/deps/libtokio_macros-425e999a07a783a5.so --cap-lints allow --cap-lints=warn` (signal: 9, SIGKILL: kill)
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "3b19d5b3f256097f94102fd20da413ac219a51802c38f948d666b4421c9b6210", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3b19d5b3f256097f94102fd20da413ac219a51802c38f948d666b4421c9b6210", kill_on_drop: false }`
[INFO] [stdout] 3b19d5b3f256097f94102fd20da413ac219a51802c38f948d666b4421c9b6210
