[INFO] fetching crate omics-variation 0.2.0...
[INFO] testing omics-variation-0.2.0 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate omics-variation 0.2.0 into /workspace/builds/worker-5-tc2/source
[INFO] started tweaking crates.io crate omics-variation 0.2.0
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate omics-variation 0.2.0
[INFO] tweaked toml for crates.io crate omics-variation 0.2.0 written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate omics-variation 0.2.0 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate omics-variation 0.2.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 03e3c187944ab6c8f081ddcc0c06d79cfd681906f1dbf20628b0a76529ee29bf
[INFO] running `Command { std: "docker" "start" "-a" "03e3c187944ab6c8f081ddcc0c06d79cfd681906f1dbf20628b0a76529ee29bf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "03e3c187944ab6c8f081ddcc0c06d79cfd681906f1dbf20628b0a76529ee29bf", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "03e3c187944ab6c8f081ddcc0c06d79cfd681906f1dbf20628b0a76529ee29bf", kill_on_drop: false }`
[INFO] [stdout] 03e3c187944ab6c8f081ddcc0c06d79cfd681906f1dbf20628b0a76529ee29bf
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 7b05466ac5abcf06ef06cebd3db91eea50fc96bf51d35ad7e2b069f49b58d843
[INFO] running `Command { std: "docker" "start" "-a" "7b05466ac5abcf06ef06cebd3db91eea50fc96bf51d35ad7e2b069f49b58d843", kill_on_drop: false }`
[INFO] [stderr]    Compiling syn v2.0.93
[INFO] [stderr]    Compiling thiserror v2.0.9
[INFO] [stderr]    Compiling omics-core v0.1.0
[INFO] [stderr]    Compiling omics-molecule v0.1.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.9
[INFO] [stderr]    Compiling omics-coordinate v0.2.0
[INFO] [stderr]    Compiling omics-variation v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3.80s
[INFO] running `Command { std: "docker" "inspect" "7b05466ac5abcf06ef06cebd3db91eea50fc96bf51d35ad7e2b069f49b58d843", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7b05466ac5abcf06ef06cebd3db91eea50fc96bf51d35ad7e2b069f49b58d843", kill_on_drop: false }`
[INFO] [stdout] 7b05466ac5abcf06ef06cebd3db91eea50fc96bf51d35ad7e2b069f49b58d843
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cc87310722c0cccba3ecf8679de33089cdd1c679732d932e21ce7031a23bd532
[INFO] running `Command { std: "docker" "start" "-a" "cc87310722c0cccba3ecf8679de33089cdd1c679732d932e21ce7031a23bd532", kill_on_drop: false }`
[INFO] [stderr]    Compiling anyhow v1.0.94
[INFO] [stderr]    Compiling omics-variation v0.2.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.05s
[INFO] running `Command { std: "docker" "inspect" "cc87310722c0cccba3ecf8679de33089cdd1c679732d932e21ce7031a23bd532", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cc87310722c0cccba3ecf8679de33089cdd1c679732d932e21ce7031a23bd532", kill_on_drop: false }`
[INFO] [stdout] cc87310722c0cccba3ecf8679de33089cdd1c679732d932e21ce7031a23bd532
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 27366f78d86408c498d6dcb780f0d5a1fd9019d64242d7d4d4b681df7a6b66d5
[INFO] running `Command { std: "docker" "start" "-a" "27366f78d86408c498d6dcb780f0d5a1fd9019d64242d7d4d4b681df7a6b66d5", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_variation-74dcbad41c5dc9bc)
[INFO] [stdout] 
[INFO] [stdout] running 13 tests
[INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_dna_context ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_rna_context ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_dna_context ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_a_deletion ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_rna_context ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_empty_pair ... ok
[INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_insertion ... ok
[INFO] [stdout] test snv::tests::it_fails_when_creating_a_variant_with_identical_nucleotides ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_rna_context ... ok
[INFO] [stdout] test tests::it_errors_when_attempting_to_parse_invalid_variants ... ok
[INFO] [stdout] test tests::it_parses_dna_snvs_correctly ... ok
[INFO] [stdout] test tests::it_serializes_correctly ... ok
[INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_dna_context ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests omics_variation
[INFO] [stdout] 
[INFO] [stdout] running 4 tests
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::reference (line 176) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::alternate (line 198) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::coordinate (line 149) ... ok
[INFO] [stdout] test src/snv.rs - snv::Variant<N>::try_new (line 109) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.64s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "27366f78d86408c498d6dcb780f0d5a1fd9019d64242d7d4d4b681df7a6b66d5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "27366f78d86408c498d6dcb780f0d5a1fd9019d64242d7d4d4b681df7a6b66d5", kill_on_drop: false }`
[INFO] [stdout] 27366f78d86408c498d6dcb780f0d5a1fd9019d64242d7d4d4b681df7a6b66d5