[INFO] fetching crate guide-counter 0.1.3...
[INFO] testing guide-counter-0.1.3 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate guide-counter 0.1.3 into /workspace/builds/worker-1-tc2/source
[INFO] started tweaking crates.io crate guide-counter 0.1.3
[INFO] finished tweaking crates.io crate guide-counter 0.1.3
[INFO] tweaked toml for crates.io crate guide-counter 0.1.3 written to /workspace/builds/worker-1-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate guide-counter 0.1.3 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate guide-counter 0.1.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 3c49893f0a701baf97756d038c70de718b70e392034ecae83c685662547eaa5b
[INFO] running `Command { std: "docker" "start" "-a" "3c49893f0a701baf97756d038c70de718b70e392034ecae83c685662547eaa5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "3c49893f0a701baf97756d038c70de718b70e392034ecae83c685662547eaa5b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3c49893f0a701baf97756d038c70de718b70e392034ecae83c685662547eaa5b", kill_on_drop: false }`
[INFO] [stdout] 3c49893f0a701baf97756d038c70de718b70e392034ecae83c685662547eaa5b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0e71c24111bb42852836cb24b09e8cd3177b5f4bcc63c30b4e1fd2d67df18dce
[INFO] running `Command { std: "docker" "start" "-a" "0e71c24111bb42852836cb24b09e8cd3177b5f4bcc63c30b4e1fd2d67df18dce", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.36
[INFO] [stderr]    Compiling unicode-xid v0.2.2
[INFO] [stderr]    Compiling cc v1.0.72
[INFO] [stderr]    Compiling syn v1.0.84
[INFO] [stderr]    Compiling libc v0.2.112
[INFO] [stderr]    Compiling memchr v2.4.1
[INFO] [stderr]    Compiling version_check v0.9.3
[INFO] [stderr]    Compiling autocfg v1.0.1
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling serde_derive v1.0.132
[INFO] [stderr]    Compiling pkg-config v0.3.24
[INFO] [stderr]    Compiling serde v1.0.132
[INFO] [stderr]    Compiling crc32fast v1.3.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling unicode-segmentation v1.8.0
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling log v0.4.14
[INFO] [stderr]    Compiling ryu v1.0.9
[INFO] [stderr]    Compiling heck v0.3.3
[INFO] [stderr]    Compiling anyhow v1.0.52
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling hashbrown v0.11.2
[INFO] [stderr]    Compiling regex-syntax v0.6.25
[INFO] [stderr]    Compiling termcolor v1.1.2
[INFO] [stderr]    Compiling miniz_oxide v0.4.4
[INFO] [stderr]    Compiling indexmap v1.7.0
[INFO] [stderr]    Compiling once_cell v1.9.0
[INFO] [stderr]    Compiling textwrap v0.14.2
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling either v1.6.1
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling ahash v0.7.6
[INFO] [stderr]    Compiling bitflags v1.3.2
[INFO] [stderr]    Compiling itertools v0.10.3
[INFO] [stderr]    Compiling aho-corasick v0.7.18
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling libz-sys v1.1.3
[INFO] [stderr]    Compiling lz4-sys v1.9.2
[INFO] [stderr]    Compiling quote v1.0.14
[INFO] [stderr]    Compiling libmimalloc-sys v0.1.23
[INFO] [stderr]    Compiling os_str_bytes v6.0.0
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling flate2 v1.0.22
[INFO] [stderr]    Compiling getrandom v0.2.3
[INFO] [stderr]    Compiling mimalloc v0.1.27
[INFO] [stderr]    Compiling regex v1.5.4
[INFO] [stderr]    Compiling env_logger v0.8.4
[INFO] [stderr]    Compiling thiserror-impl v1.0.30
[INFO] [stderr]    Compiling clap_derive v3.0.0-rc.9
[INFO] [stderr]    Compiling enum_dispatch v0.3.7
[INFO] [stderr]    Compiling thiserror v1.0.30
[INFO] [stderr]    Compiling clap v3.0.0-rc.9
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling fgoxide v0.1.3
[INFO] [stderr]    Compiling lz4 v1.23.2
[INFO] [stderr]    Compiling fastq v0.6.0
[INFO] [stderr]    Compiling guide-counter v0.1.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/commands/count.rs:187:30
[INFO] [stdout]     |
[INFO] [stdout] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap {
[INFO] [stdout]     |                              ^^^^^^^^^^^^^                           ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]     |                              |
[INFO] [stdout]     |                              the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap<'_> {
[INFO] [stdout]     |                                                                              ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 27.82s
[INFO] running `Command { std: "docker" "inspect" "0e71c24111bb42852836cb24b09e8cd3177b5f4bcc63c30b4e1fd2d67df18dce", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0e71c24111bb42852836cb24b09e8cd3177b5f4bcc63c30b4e1fd2d67df18dce", kill_on_drop: false }`
[INFO] [stdout] 0e71c24111bb42852836cb24b09e8cd3177b5f4bcc63c30b4e1fd2d67df18dce
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4f8624491e4579e1660ba0e7763b511af5f45535f73a8da04f81f0882cf3cca2
[INFO] running `Command { std: "docker" "start" "-a" "4f8624491e4579e1660ba0e7763b511af5f45535f73a8da04f81f0882cf3cca2", kill_on_drop: false }`
[INFO] [stderr]    Compiling ppv-lite86 v0.2.15
[INFO] [stderr]    Compiling getrandom v0.2.3
[INFO] [stderr]    Compiling remove_dir_all v0.5.3
[INFO] [stderr]    Compiling rand_core v0.6.3
[INFO] [stderr]    Compiling ahash v0.7.6
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.4
[INFO] [stderr]    Compiling tempfile v3.2.0
[INFO] [stderr]    Compiling guide-counter v0.1.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]    --> src/commands/count.rs:187:30
[INFO] [stdout]     |
[INFO] [stdout] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap {
[INFO] [stdout]     |                              ^^^^^^^^^^^^^                           ^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]     |                              |
[INFO] [stdout]     |                              the lifetime is elided here
[INFO] [stdout]     |
[INFO] [stdout]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]     |
[INFO] [stdout] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap<'_> {
[INFO] [stdout]     |                                                                              ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 3.41s
[INFO] running `Command { std: "docker" "inspect" "4f8624491e4579e1660ba0e7763b511af5f45535f73a8da04f81f0882cf3cca2", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4f8624491e4579e1660ba0e7763b511af5f45535f73a8da04f81f0882cf3cca2", kill_on_drop: false }`
[INFO] [stdout] 4f8624491e4579e1660ba0e7763b511af5f45535f73a8da04f81f0882cf3cca2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 5a469a8ec1300be54e3b9130caa37d97e0b36e746004a9126986193d7ccd485a
[INFO] running `Command { std: "docker" "start" "-a" "5a469a8ec1300be54e3b9130caa37d97e0b36e746004a9126986193d7ccd485a", kill_on_drop: false }`
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]    --> src/commands/count.rs:187:30
[INFO] [stderr]     |
[INFO] [stderr] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap {
[INFO] [stderr]     |                              ^^^^^^^^^^^^^                           ^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]     |                              |
[INFO] [stderr]     |                              the lifetime is elided here
[INFO] [stderr]     |
[INFO] [stderr]     = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr]     = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]     |
[INFO] [stderr] 187 |     fn build_lookup(library: &GuideLibrary, allow_mismatch: bool) -> GuideMap<'_> {
[INFO] [stderr]     |                                                                              ++++
[INFO] [stderr] 
[INFO] [stderr] warning: `guide-counter` (bin "guide-counter" test) generated 1 warning (run `cargo fix --bin "guide-counter" --tests` to apply 1 suggestion)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/guide_counter-5db5ced56ee25c25)
[INFO] [stdout] 
[INFO] [stdout] running 19 tests
[INFO] [stdout] test guide::tests::test_guide_library_rejects_mixed_length ... ok
[INFO] [stdout] test guide::tests::test_guide_uppercases_sequence ... ok
[INFO] [stdout] test guide::tests::test_is_all_acgt ... ok
[INFO] [stdout] test commands::count::tests::test_sample_name ... ok
[INFO] [stdout] test guide::tests::test_guide_library_positive ... ok
[INFO] [stdout] test guide::tests::test_guide_library_rejects_invalid_sequences ... ok
[INFO] [stdout] test commands::count::tests::test_count_reads_handles_empty_fastq ... ok
[INFO] [stdout] test commands::count::tests::test_determine_prefixes_finds_offset_zero ... ok
[INFO] [stdout] test commands::count::tests::test_determine_prefixes_finds_last_offset ... ok
[INFO] [stdout] test guide::tests::test_load_guide_library_from_files ... ok
[INFO] [stdout] test guide::tests::test_guide_library_rejects_duplicate_sequences ... ok
[INFO] [stdout] test commands::count::tests::test_count_reads ... ok
[INFO] [stdout] test commands::count::tests::test_determine_prefixes_actually_subsamples ... ok
[INFO] [stdout] test commands::count::tests::test_determine_prefixes_min_fraction ... ok
[INFO] [stdout] test guide::tests::test_reading_guide_library_from_tsv_file ... ok
[INFO] [stdout] test commands::count::tests::test_build_lookup ... ok
[INFO] [stdout] test guide::tests::test_reading_guide_library_from_csv_file ... ok
[INFO] [stdout] test commands::count::tests::test_reads_shorter_than_guides_ok ... ok
[INFO] [stdout] test commands::count::tests::test_end_to_end ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 19 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.09s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "5a469a8ec1300be54e3b9130caa37d97e0b36e746004a9126986193d7ccd485a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5a469a8ec1300be54e3b9130caa37d97e0b36e746004a9126986193d7ccd485a", kill_on_drop: false }`
[INFO] [stdout] 5a469a8ec1300be54e3b9130caa37d97e0b36e746004a9126986193d7ccd485a