[INFO] fetching crate genovo 0.3.2...
[INFO] testing genovo-0.3.2 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate genovo 0.3.2 into /workspace/builds/worker-3-tc2/source
[INFO] started tweaking crates.io crate genovo 0.3.2
[INFO] finished tweaking crates.io crate genovo 0.3.2
[INFO] tweaked toml for crates.io crate genovo 0.3.2 written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate genovo 0.3.2 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate genovo 0.3.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d8d2169dcfcd6a6e6766789e41993df7db109784dcd44f63a20a9839806ce1a9
[INFO] running `Command { std: "docker" "start" "-a" "d8d2169dcfcd6a6e6766789e41993df7db109784dcd44f63a20a9839806ce1a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d8d2169dcfcd6a6e6766789e41993df7db109784dcd44f63a20a9839806ce1a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d8d2169dcfcd6a6e6766789e41993df7db109784dcd44f63a20a9839806ce1a9", kill_on_drop: false }`
[INFO] [stdout] d8d2169dcfcd6a6e6766789e41993df7db109784dcd44f63a20a9839806ce1a9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 646a01b5ae7559ebf8e58bb5c8cc9e53dd0f046bf5c85e2518df9b645644bf29
[INFO] running `Command { std: "docker" "start" "-a" "646a01b5ae7559ebf8e58bb5c8cc9e53dd0f046bf5c85e2518df9b645644bf29", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.43
[INFO] [stderr]    Compiling unicode-ident v1.0.4
[INFO] [stderr]    Compiling libc v0.2.132
[INFO] [stderr]    Compiling serde_derive v1.0.144
[INFO] [stderr]    Compiling serde v1.0.144
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]    Compiling thiserror v1.0.35
[INFO] [stderr]    Compiling anyhow v1.0.65
[INFO] [stderr]    Compiling ppv-lite86 v0.2.16
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling num-bigint v0.3.3
[INFO] [stderr]    Compiling tabfile v0.2.1
[INFO] [stderr]    Compiling unicode-width v0.1.10
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling twobit v0.1.1
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling miniz_oxide v0.5.4
[INFO] [stderr]    Compiling pattern_partition_prediction v0.1.4
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling flate2 v1.0.24
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling quote v1.0.21
[INFO] [stderr]    Compiling syn v1.0.99
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling bigdecimal v0.2.2
[INFO] [stderr]    Compiling thiserror-impl v1.0.35
[INFO] [stderr]    Compiling serde_repr v0.1.9
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling mutexpect v0.2.7
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling genovo v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 21.49s
[INFO] running `Command { std: "docker" "inspect" "646a01b5ae7559ebf8e58bb5c8cc9e53dd0f046bf5c85e2518df9b645644bf29", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "646a01b5ae7559ebf8e58bb5c8cc9e53dd0f046bf5c85e2518df9b645644bf29", kill_on_drop: false }`
[INFO] [stdout] 646a01b5ae7559ebf8e58bb5c8cc9e53dd0f046bf5c85e2518df9b645644bf29
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2703405b34d91e50556324a78b7c09b7965c32fca2b4d73aa3454eb9718ebe12
[INFO] running `Command { std: "docker" "start" "-a" "2703405b34d91e50556324a78b7c09b7965c32fca2b4d73aa3454eb9718ebe12", kill_on_drop: false }`
[INFO] [stderr]    Compiling genovo v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.88s
[INFO] running `Command { std: "docker" "inspect" "2703405b34d91e50556324a78b7c09b7965c32fca2b4d73aa3454eb9718ebe12", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2703405b34d91e50556324a78b7c09b7965c32fca2b4d73aa3454eb9718ebe12", kill_on_drop: false }`
[INFO] [stdout] 2703405b34d91e50556324a78b7c09b7965c32fca2b4d73aa3454eb9718ebe12
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 130c0bc6b6d41102c3dcd14cd9d94f0460a1b737b332af6a0d0a94964bb21a76
[INFO] running `Command { std: "docker" "start" "-a" "130c0bc6b6d41102c3dcd14cd9d94f0460a1b737b332af6a0d0a94964bb21a76", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/genovo-fdd883372796c026)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test counts::tests::test_conf_interval ... ok
[INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok
[INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok
[INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok
[INFO] [stdout] test transform::tests::test_gff3_io ... ok
[INFO] [stdout] test transform::tests::test_region_file_io ... ok
[INFO] [stdout] test counts::tests::test_p_values ... ok
[INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "130c0bc6b6d41102c3dcd14cd9d94f0460a1b737b332af6a0d0a94964bb21a76", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "130c0bc6b6d41102c3dcd14cd9d94f0460a1b737b332af6a0d0a94964bb21a76", kill_on_drop: false }`
[INFO] [stdout] 130c0bc6b6d41102c3dcd14cd9d94f0460a1b737b332af6a0d0a94964bb21a76