[INFO] fetching crate gchemol-neighbors 0.1.3...
[INFO] testing gchemol-neighbors-0.1.3 against beta-2025-09-21 for beta-1.91-3
[INFO] extracting crate gchemol-neighbors 0.1.3 into /workspace/builds/worker-2-tc2/source
[INFO] started tweaking crates.io crate gchemol-neighbors 0.1.3
[INFO] finished tweaking crates.io crate gchemol-neighbors 0.1.3
[INFO] tweaked toml for crates.io crate gchemol-neighbors 0.1.3 written to /workspace/builds/worker-2-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate gchemol-neighbors 0.1.3 on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate gchemol-neighbors 0.1.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 319572b514730ba234319478c11657c22d0bb48cf587562f7934a103d25b1fe8
[INFO] running `Command { std: "docker" "start" "-a" "319572b514730ba234319478c11657c22d0bb48cf587562f7934a103d25b1fe8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "319572b514730ba234319478c11657c22d0bb48cf587562f7934a103d25b1fe8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "319572b514730ba234319478c11657c22d0bb48cf587562f7934a103d25b1fe8", kill_on_drop: false }`
[INFO] [stdout] 319572b514730ba234319478c11657c22d0bb48cf587562f7934a103d25b1fe8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5c904837f54cb07f194c27362ab77bc433b5c97de92a0e7b4a5d3457275a9294
[INFO] running `Command { std: "docker" "start" "-a" "5c904837f54cb07f194c27362ab77bc433b5c97de92a0e7b4a5d3457275a9294", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.52
[INFO] [stderr]    Compiling quote v1.0.26
[INFO] [stderr]    Compiling libc v0.2.140
[INFO] [stderr]    Compiling serde_derive v1.0.157
[INFO] [stderr]    Compiling serde v1.0.157
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling crossbeam-utils v0.8.15
[INFO] [stderr]    Compiling io-lifetimes v1.0.7
[INFO] [stderr]    Compiling memoffset v0.8.0
[INFO] [stderr]    Compiling rustix v0.36.9
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.14
[INFO] [stderr]    Compiling paste v1.0.12
[INFO] [stderr]    Compiling bytemuck v1.13.1
[INFO] [stderr]    Compiling linux-raw-sys v0.1.4
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling safe_arch v0.6.0
[INFO] [stderr]    Compiling indexmap v1.9.2
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]    Compiling typenum v1.16.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling matrixmultiply v0.3.2
[INFO] [stderr]    Compiling aho-corasick v0.7.20
[INFO] [stderr]    Compiling anyhow v1.0.70
[INFO] [stderr]    Compiling serde_json v1.0.94
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling winnow v0.4.1
[INFO] [stderr]    Compiling termcolor v1.2.0
[INFO] [stderr]    Compiling either v1.8.1
[INFO] [stderr]    Compiling crossbeam-channel v0.5.7
[INFO] [stderr]    Compiling once_cell v1.17.1
[INFO] [stderr]    Compiling wide v0.7.8
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling clap_lex v0.3.3
[INFO] [stderr]    Compiling time-core v0.1.0
[INFO] [stderr]    Compiling fastrand v1.9.0
[INFO] [stderr]    Compiling regex v1.7.1
[INFO] [stderr]    Compiling itoa v1.0.6
[INFO] [stderr]    Compiling ryu v1.0.13
[INFO] [stderr]    Compiling crossbeam-deque v0.8.3
[INFO] [stderr]    Compiling time v0.3.20
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling shell-escape v0.1.5
[INFO] [stderr]    Compiling syn v2.0.0
[INFO] [stderr]    Compiling num_cpus v1.15.0
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling os_pipe v1.1.3
[INFO] [stderr]    Compiling shared_child v1.0.0
[INFO] [stderr]    Compiling duct v0.13.6
[INFO] [stderr]    Compiling rayon-core v1.11.0
[INFO] [stderr]    Compiling rayon v1.7.0
[INFO] [stderr]    Compiling is-terminal v0.4.4
[INFO] [stderr]    Compiling tempfile v3.4.0
[INFO] [stderr]    Compiling env_logger v0.10.0
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling clap_derive v4.1.9
[INFO] [stderr]    Compiling clap v4.1.10
[INFO] [stderr]    Compiling num-complex v0.4.3
[INFO] [stderr]    Compiling serde_spanned v0.6.1
[INFO] [stderr]    Compiling toml_datetime v0.6.1
[INFO] [stderr]    Compiling ordered-float v3.4.0
[INFO] [stderr]    Compiling toml_edit v0.19.8
[INFO] [stderr]    Compiling simba v0.7.3
[INFO] [stderr]    Compiling toml v0.7.3
[INFO] [stderr]    Compiling gchemol-gut v0.4.4
[INFO] [stderr]    Compiling nalgebra v0.31.4
[INFO] [stderr]    Compiling vecfx v0.1.6
[INFO] [stderr]    Compiling octree v0.1.0
[INFO] [stderr]    Compiling gchemol-lattice v0.1.2
[INFO] [stderr]    Compiling gchemol-neighbors v0.1.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `crate::api::*`
[INFO] [stdout]    --> src/lib.rs:158:9
[INFO] [stdout]     |
[INFO] [stdout] 158 | pub use crate::api::*;
[INFO] [stdout]     |         ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 52.03s
[INFO] running `Command { std: "docker" "inspect" "5c904837f54cb07f194c27362ab77bc433b5c97de92a0e7b4a5d3457275a9294", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5c904837f54cb07f194c27362ab77bc433b5c97de92a0e7b4a5d3457275a9294", kill_on_drop: false }`
[INFO] [stdout] 5c904837f54cb07f194c27362ab77bc433b5c97de92a0e7b4a5d3457275a9294
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b841f1f155c9b793278e324dd07ddec5acb200d0cf56c3ac2b298a2470d83091
[INFO] running `Command { std: "docker" "start" "-a" "b841f1f155c9b793278e324dd07ddec5acb200d0cf56c3ac2b298a2470d83091", kill_on_drop: false }`
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling serde_cbor v0.11.2
[INFO] [stderr]    Compiling time v0.1.45
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling plotters v0.3.4
[INFO] [stderr]    Compiling criterion-plot v0.4.5
[INFO] [stderr]    Compiling walkdir v2.3.3
[INFO] [stdout] warning: unused import: `crate::api::*`
[INFO] [stdout]    --> src/lib.rs:158:9
[INFO] [stdout]     |
[INFO] [stdout] 158 | pub use crate::api::*;
[INFO] [stdout]     |         ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling timeit v0.1.2
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling csv v1.2.1
[INFO] [stderr]    Compiling criterion v0.3.6
[INFO] [stderr]    Compiling gchemol-neighbors v0.1.3 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `crate::api::*`
[INFO] [stdout]    --> src/lib.rs:158:9
[INFO] [stdout]     |
[INFO] [stdout] 158 | pub use crate::api::*;
[INFO] [stdout]     |         ^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 12.60s
[INFO] running `Command { std: "docker" "inspect" "b841f1f155c9b793278e324dd07ddec5acb200d0cf56c3ac2b298a2470d83091", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b841f1f155c9b793278e324dd07ddec5acb200d0cf56c3ac2b298a2470d83091", kill_on_drop: false }`
[INFO] [stdout] b841f1f155c9b793278e324dd07ddec5acb200d0cf56c3ac2b298a2470d83091
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 5a80a4a535378d75bb5a6f2bfbf1600b0736a03dfd034a2f07d1f21a542224b0
[INFO] running `Command { std: "docker" "start" "-a" "5a80a4a535378d75bb5a6f2bfbf1600b0736a03dfd034a2f07d1f21a542224b0", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `crate::api::*`
[INFO] [stderr]    --> src/lib.rs:158:9
[INFO] [stderr]     |
[INFO] [stderr] 158 | pub use crate::api::*;
[INFO] [stderr]     |         ^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `gchemol-neighbors` (lib) generated 1 warning (run `cargo fix --lib -p gchemol-neighbors` to apply 1 suggestion)
[INFO] [stderr] warning: `gchemol-neighbors` (lib test) generated 1 warning (1 duplicate)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.21s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/gchemol_neighbors-7eab5190caf3570f)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stderr]      Running tests/periodic.rs (/opt/rustwide/target/debug/deps/periodic-cd26b5ddb0b80969)
[INFO] [stderr]      Running tests/update.rs (/opt/rustwide/target/debug/deps/update-6b8c91ce63048c26)
[INFO] [stderr]    Doc-tests gchemol_neighbors
[INFO] [stdout] test periodic::test_triclinic ... ok
[INFO] [stdout] test periodic::test_orthorhombic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_periodic_neighbors ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test test_neighbors ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "5a80a4a535378d75bb5a6f2bfbf1600b0736a03dfd034a2f07d1f21a542224b0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5a80a4a535378d75bb5a6f2bfbf1600b0736a03dfd034a2f07d1f21a542224b0", kill_on_drop: false }`
[INFO] [stdout] 5a80a4a535378d75bb5a6f2bfbf1600b0736a03dfd034a2f07d1f21a542224b0