[INFO] fetching crate motif_finder 0.9.2... [INFO] testing motif_finder-0.9.2 against 1.90.0 for beta-1.91-3 [INFO] extracting crate motif_finder 0.9.2 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate motif_finder 0.9.2 [INFO] finished tweaking crates.io crate motif_finder 0.9.2 [INFO] tweaked toml for crates.io crate motif_finder 0.9.2 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate motif_finder 0.9.2 on toolchain 1.90.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate motif_finder 0.9.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded indicatif v0.17.3 [INFO] [stderr] Downloaded console v0.15.5 [INFO] [stderr] Downloaded scratch v1.0.5 [INFO] [stderr] Downloaded link-cplusplus v1.0.8 [INFO] [stderr] Downloaded enum-map-derive v0.6.0 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded cxxbridge-flags v1.0.93 [INFO] [stderr] Downloaded ordered-float v3.6.0 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded bytecount v0.6.3 [INFO] [stderr] Downloaded anyhow v1.0.70 [INFO] [stderr] Downloaded cxxbridge-macro v1.0.93 [INFO] [stderr] Downloaded cxx-build v1.0.93 [INFO] [stderr] Downloaded portable-atomic v0.3.19 [INFO] [stderr] Downloaded statrs v0.16.0 [INFO] [stderr] Downloaded matrixmultiply v0.3.2 [INFO] [stderr] Downloaded iana-time-zone v0.1.54 [INFO] [stderr] Downloaded clap v4.1.11 [INFO] [stderr] Downloaded petgraph v0.6.3 [INFO] [stderr] Downloaded bio v1.3.1 [INFO] [stderr] Downloaded rustix v0.37.6 [INFO] [stderr] Downloaded cxx v1.0.93 [INFO] [stderr] Downloaded chrono v0.4.24 [INFO] [stderr] Downloaded tracing-subscriber v0.3.16 [INFO] [stderr] Downloaded bitflags v2.0.2 [INFO] [stderr] Downloaded enum-map v1.1.1 [INFO] [stderr] Downloaded rustversion v1.0.12 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded clap_derive v4.1.9 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded clap_lex v0.3.3 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded clap-verbosity-flag v2.0.1 [INFO] [stderr] Downloaded is-terminal v0.4.6 [INFO] [stderr] Downloaded roff v0.2.1 [INFO] [stderr] Downloaded clap_mangen v0.2.10 [INFO] [stderr] Downloaded csv v1.2.1 [INFO] [stderr] Downloaded bio-types v1.0.0 [INFO] [stderr] Downloaded windows v0.46.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 04d34f5fd722c3bf69f309fc6642266112c164705854911a4f07e8e43cad4485 [INFO] running `Command { std: "docker" "start" "-a" "04d34f5fd722c3bf69f309fc6642266112c164705854911a4f07e8e43cad4485", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "04d34f5fd722c3bf69f309fc6642266112c164705854911a4f07e8e43cad4485", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "04d34f5fd722c3bf69f309fc6642266112c164705854911a4f07e8e43cad4485", kill_on_drop: false }` [INFO] [stdout] 04d34f5fd722c3bf69f309fc6642266112c164705854911a4f07e8e43cad4485 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 55d31113bbc5124815ff2359434563113020d81f7c66b170a76e0013903a9c58 [INFO] running `Command { std: "docker" "start" "-a" "55d31113bbc5124815ff2359434563113020d81f7c66b170a76e0013903a9c58", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.53 [INFO] [stderr] Compiling unicode-ident v1.0.8 [INFO] [stderr] Compiling quote v1.0.26 [INFO] [stderr] Compiling libc v0.2.140 [INFO] [stderr] Compiling libm v0.2.6 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.15 [INFO] [stderr] Compiling serde_derive v1.0.158 [INFO] [stderr] Compiling memoffset v0.8.0 [INFO] [stderr] Compiling serde v1.0.158 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling once_cell v1.17.1 [INFO] [stderr] Compiling crossbeam-epoch v0.9.14 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling bytemuck v1.13.1 [INFO] [stderr] Compiling io-lifetimes v1.0.9 [INFO] [stderr] Compiling paste v1.0.12 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling typenum v1.16.0 [INFO] [stderr] Compiling rustix v0.37.6 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling log v0.4.17 [INFO] [stderr] Compiling rustversion v1.0.12 [INFO] [stderr] Compiling safe_arch v0.6.0 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling matrixmultiply v0.3.2 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling rayon-core v1.11.0 [INFO] [stderr] Compiling thiserror v1.0.40 [INFO] [stderr] Compiling either v1.8.1 [INFO] [stderr] Compiling linux-raw-sys v0.3.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.3 [INFO] [stderr] Compiling aho-corasick v0.7.20 [INFO] [stderr] Compiling wide v0.7.8 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling crossbeam-channel v0.5.7 [INFO] [stderr] Compiling tracing-core v0.1.30 [INFO] [stderr] Compiling anyhow v1.0.70 [INFO] [stderr] Compiling portable-atomic v0.3.19 [INFO] [stderr] Compiling os_str_bytes v6.5.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling syn v2.0.5 [INFO] [stderr] Compiling clap_lex v0.3.3 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling termcolor v1.2.0 [INFO] [stderr] Compiling ryu v1.0.13 [INFO] [stderr] Compiling getrandom v0.2.8 [INFO] [stderr] Compiling num-complex v0.4.3 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling num_cpus v1.15.0 [INFO] [stderr] Compiling regex v1.7.3 [INFO] [stderr] Compiling unicode-width v0.1.10 [INFO] [stderr] Compiling itoa v1.0.6 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling bitflags v2.0.2 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling petgraph v0.6.3 [INFO] [stderr] Compiling console v0.15.5 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling tracing-log v0.1.3 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling ordered-float v3.6.0 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling thread_local v1.1.7 [INFO] [stderr] Compiling sharded-slab v0.1.4 [INFO] [stderr] Compiling bytecount v0.6.3 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling rayon v1.7.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling pin-project-lite v0.2.9 [INFO] [stderr] Compiling is-terminal v0.4.6 [INFO] [stderr] Compiling iana-time-zone v0.1.54 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling strum v0.24.1 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling chrono v0.4.24 [INFO] [stderr] Compiling tracing-subscriber v0.3.16 [INFO] [stderr] Compiling thiserror-impl v1.0.40 [INFO] [stderr] Compiling indicatif v0.17.3 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling clap_derive v4.1.9 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling tracing-attributes v0.1.23 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling tracing v0.1.37 [INFO] [stderr] Compiling bio-types v1.0.0 [INFO] [stderr] Compiling clap v4.1.11 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling csv v1.2.1 [INFO] [stderr] Compiling clap-verbosity-flag v2.0.1 [INFO] [stderr] Compiling statrs v0.16.0 [INFO] [stderr] Compiling bio v1.3.1 [INFO] [stderr] Compiling motif_finder v0.9.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 50.95s [INFO] running `Command { std: "docker" "inspect" "55d31113bbc5124815ff2359434563113020d81f7c66b170a76e0013903a9c58", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "55d31113bbc5124815ff2359434563113020d81f7c66b170a76e0013903a9c58", kill_on_drop: false }` [INFO] [stdout] 55d31113bbc5124815ff2359434563113020d81f7c66b170a76e0013903a9c58 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] b9d8b95a3b6ed4702b2a3608304c459a0857f6e36dda1da1a9a258bd7f6dcb21 [INFO] running `Command { std: "docker" "start" "-a" "b9d8b95a3b6ed4702b2a3608304c459a0857f6e36dda1da1a9a258bd7f6dcb21", kill_on_drop: false }` [INFO] [stderr] Compiling motif_finder v0.9.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.59s [INFO] running `Command { std: "docker" "inspect" "b9d8b95a3b6ed4702b2a3608304c459a0857f6e36dda1da1a9a258bd7f6dcb21", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b9d8b95a3b6ed4702b2a3608304c459a0857f6e36dda1da1a9a258bd7f6dcb21", kill_on_drop: false }` [INFO] [stdout] b9d8b95a3b6ed4702b2a3608304c459a0857f6e36dda1da1a9a258bd7f6dcb21 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 035c272603cfd97aaf5db21579e46fa47e21c93f0df9fdc136942012f20bab19 [INFO] running `Command { std: "docker" "start" "-a" "035c272603cfd97aaf5db21579e46fa47e21c93f0df9fdc136942012f20bab19", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/motif_finder-66cda279e6ed9549) [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test bwt::pssm ... ok [INFO] [stdout] test test::test_load_data ... ok [INFO] [stdout] test test::test_entries_less_than_five ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 10.64s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/motif_finder.rs (/opt/rustwide/target/debug/deps/motif_finder-1c6036ecb9b58b0b) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests motif_finder [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "035c272603cfd97aaf5db21579e46fa47e21c93f0df9fdc136942012f20bab19", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "035c272603cfd97aaf5db21579e46fa47e21c93f0df9fdc136942012f20bab19", kill_on_drop: false }` [INFO] [stdout] 035c272603cfd97aaf5db21579e46fa47e21c93f0df9fdc136942012f20bab19