[INFO] fetching crate genome-graph 11.0.0...
[INFO] testing genome-graph-11.0.0 against 1.90.0 for beta-1.91-3
[INFO] extracting crate genome-graph 11.0.0 into /workspace/builds/worker-2-tc1/source
[INFO] removed /workspace/builds/worker-2-tc1/source/rust-toolchain.toml
[INFO] started tweaking crates.io crate genome-graph 11.0.0
[INFO] finished tweaking crates.io crate genome-graph 11.0.0
[INFO] tweaked toml for crates.io crate genome-graph 11.0.0 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate genome-graph 11.0.0 on toolchain 1.90.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate genome-graph 11.0.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded thiserror-impl v2.0.11
[INFO] [stderr]   Downloaded traitgraph-algo v8.1.2
[INFO] [stderr]   Downloaded traitsequence v8.1.2
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded traitgraph v8.1.2
[INFO] [stderr]   Downloaded derive-new v0.6.0
[INFO] [stderr]   Downloaded bitvector v0.1.5
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded bigraph v5.0.1
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded bytemuck v1.21.0
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded statrs v0.17.1
[INFO] [stderr]   Downloaded zerocopy-derive v0.8.14
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded zerocopy v0.8.14
[INFO] [stderr]   Downloaded compact-genome v12.0.1
[INFO] [stderr]   Downloaded thiserror v2.0.11
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded disjoint-sets v0.4.2
[INFO] [stderr]   Downloaded bio v2.0.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 65aec9922ac1902d2f81c140b97b5652225161bf0ce92c5bea7f9e08a8df2657
[INFO] running `Command { std: "docker" "start" "-a" "65aec9922ac1902d2f81c140b97b5652225161bf0ce92c5bea7f9e08a8df2657", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "65aec9922ac1902d2f81c140b97b5652225161bf0ce92c5bea7f9e08a8df2657", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "65aec9922ac1902d2f81c140b97b5652225161bf0ce92c5bea7f9e08a8df2657", kill_on_drop: false }`
[INFO] [stdout] 65aec9922ac1902d2f81c140b97b5652225161bf0ce92c5bea7f9e08a8df2657
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 2177b0fc095ea6b563a897297987e2a557a5a2aff4500513e3f5f65c89fbe03c
[INFO] running `Command { std: "docker" "start" "-a" "2177b0fc095ea6b563a897297987e2a557a5a2aff4500513e3f5f65c89fbe03c", kill_on_drop: false }`
[INFO] [stderr]    Compiling unicode-ident v1.0.16
[INFO] [stderr]    Compiling libm v0.2.11
[INFO] [stderr]    Compiling libc v0.2.169
[INFO] [stderr]    Compiling foldhash v0.1.4
[INFO] [stderr]    Compiling zerocopy v0.8.14
[INFO] [stderr]    Compiling getrandom v0.3.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.9
[INFO] [stderr]    Compiling bytemuck v1.21.0
[INFO] [stderr]    Compiling rustversion v1.0.19
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling traitsequence v8.1.2
[INFO] [stderr]    Compiling thiserror v2.0.11
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling proc-macro2 v1.0.93
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling ryu v1.0.19
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling hashbrown v0.15.2
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling itertools v0.14.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling itertools v0.13.0
[INFO] [stderr]    Compiling bitvector v0.1.5
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling wide v0.7.32
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling quote v1.0.38
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling disjoint-sets v0.4.2
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling syn v2.0.96
[INFO] [stderr]    Compiling indexmap v2.7.1
[INFO] [stderr]    Compiling getrandom v0.2.15
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling ordered-float v4.6.0
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling petgraph v0.7.1
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr]    Compiling rand_core v0.9.0
[INFO] [stderr]    Compiling simba v0.8.1
[INFO] [stderr]    Compiling traitgraph v8.1.2
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling serde_derive v1.0.217
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling nalgebra-macros v0.2.2
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.11
[INFO] [stderr]    Compiling ref-cast-impl v1.0.23
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling zerocopy v0.7.35
[INFO] [stderr]    Compiling ref-cast v1.0.23
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling compact-genome v12.0.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.20
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling rand v0.9.0
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling traitgraph-algo v8.1.2
[INFO] [stderr]    Compiling serde v1.0.217
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling bigraph v5.0.1
[INFO] [stderr]    Compiling nalgebra v0.32.6
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling multimap v0.10.0
[INFO] [stderr]    Compiling csv v1.3.1
[INFO] [stderr]    Compiling statrs v0.17.1
[INFO] [stderr]    Compiling bio v2.0.3
[INFO] [stderr]    Compiling genome-graph v11.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 52.04s
[INFO] running `Command { std: "docker" "inspect" "2177b0fc095ea6b563a897297987e2a557a5a2aff4500513e3f5f65c89fbe03c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "2177b0fc095ea6b563a897297987e2a557a5a2aff4500513e3f5f65c89fbe03c", kill_on_drop: false }`
[INFO] [stdout] 2177b0fc095ea6b563a897297987e2a557a5a2aff4500513e3f5f65c89fbe03c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1e421de4037c3e234fb0e7bc21c07d04eba7539599ff4c11a4fdd083c1234337
[INFO] running `Command { std: "docker" "start" "-a" "1e421de4037c3e234fb0e7bc21c07d04eba7539599ff4c11a4fdd083c1234337", kill_on_drop: false }`
[INFO] [stderr]    Compiling genome-graph v11.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.50s
[INFO] running `Command { std: "docker" "inspect" "1e421de4037c3e234fb0e7bc21c07d04eba7539599ff4c11a4fdd083c1234337", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1e421de4037c3e234fb0e7bc21c07d04eba7539599ff4c11a4fdd083c1234337", kill_on_drop: false }`
[INFO] [stdout] 1e421de4037c3e234fb0e7bc21c07d04eba7539599ff4c11a4fdd083c1234337
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 1278797ddee32c5fb24ffe54f84f7c222740ea0b0cedc73897afeceb5b07499e
[INFO] running `Command { std: "docker" "start" "-a" "1278797ddee32c5fb24ffe54f84f7c222740ea0b0cedc73897afeceb5b07499e", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.11s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/genome_graph-7b365bc868ed8090)
[INFO] [stdout] 
[INFO] [stdout] running 11 tests
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_forward_merge ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_minus_plus_loop ... ok
[INFO] [stdout] test io::bcalm2::tests::test_node_read_write ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write ... ok
[INFO] [stdout] test io::gfa::tests::test_read_gfa_as_edge_centric_bigraph_simple ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_self_mirror_node_and_edge ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_self_mirror_edge ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_multigraph ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_loop ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_self_loops ... ok
[INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_and_minus_plus_loop ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests genome_graph
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "1278797ddee32c5fb24ffe54f84f7c222740ea0b0cedc73897afeceb5b07499e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1278797ddee32c5fb24ffe54f84f7c222740ea0b0cedc73897afeceb5b07499e", kill_on_drop: false }`
[INFO] [stdout] 1278797ddee32c5fb24ffe54f84f7c222740ea0b0cedc73897afeceb5b07499e