[INFO] fetching crate fqtk 0.3.1... [INFO] testing fqtk-0.3.1 against 1.90.0 for beta-1.91-3 [INFO] extracting crate fqtk 0.3.1 into /workspace/builds/worker-6-tc1/source [INFO] removed /workspace/builds/worker-6-tc1/source/rust-toolchain.toml [INFO] started tweaking crates.io crate fqtk 0.3.1 [INFO] finished tweaking crates.io crate fqtk 0.3.1 [INFO] tweaked toml for crates.io crate fqtk 0.3.1 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate fqtk 0.3.1 on toolchain 1.90.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate fqtk 0.3.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded itoa v1.0.5 [INFO] [stderr] Downloaded thiserror-impl v1.0.38 [INFO] [stderr] Downloaded serde_derive v1.0.151 [INFO] [stderr] Downloaded serde-aux v4.1.2 [INFO] [stderr] Downloaded thiserror v1.0.38 [INFO] [stderr] Downloaded proglog v0.3.0 [INFO] [stderr] Downloaded anyhow v1.0.68 [INFO] [stderr] Downloaded is-terminal v0.4.1 [INFO] [stderr] Downloaded libdeflater v0.7.5 [INFO] [stderr] Downloaded clap_lex v0.3.0 [INFO] [stderr] Downloaded fgoxide v0.3.0 [INFO] [stderr] Downloaded mimalloc v0.1.32 [INFO] [stderr] Downloaded clap_derive v4.0.21 [INFO] [stderr] Downloaded ahash v0.8.2 [INFO] [stderr] Downloaded flate2 v1.0.25 [INFO] [stderr] Downloaded cxx-build v1.0.85 [INFO] [stderr] Downloaded bumpalo v3.11.1 [INFO] [stderr] Downloaded libdeflate-sys v0.7.5 [INFO] [stderr] Downloaded bytes v1.3.0 [INFO] [stderr] Downloaded futures-util v0.3.25 [INFO] [stderr] Downloaded futures v0.3.25 [INFO] [stderr] Downloaded rstest_macros v0.14.0 [INFO] [stderr] 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"/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f7a2201a0aa1bdd048461864bce146556b34d7e259817847ab7d2b93128ccb40 [INFO] running `Command { std: "docker" "start" "-a" "f7a2201a0aa1bdd048461864bce146556b34d7e259817847ab7d2b93128ccb40", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f7a2201a0aa1bdd048461864bce146556b34d7e259817847ab7d2b93128ccb40", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f7a2201a0aa1bdd048461864bce146556b34d7e259817847ab7d2b93128ccb40", kill_on_drop: false }` [INFO] [stdout] f7a2201a0aa1bdd048461864bce146556b34d7e259817847ab7d2b93128ccb40 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d9de035d87a6748516b672e869b47a165fec6888792d8d321a56938eddb35102 [INFO] running `Command { std: "docker" "start" "-a" "d9de035d87a6748516b672e869b47a165fec6888792d8d321a56938eddb35102", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.49 [INFO] [stderr] Compiling syn v1.0.107 [INFO] [stderr] Compiling libc v0.2.138 [INFO] [stderr] Compiling cc v1.0.78 [INFO] [stderr] Compiling serde_derive v1.0.151 [INFO] [stderr] Compiling serde v1.0.151 [INFO] [stderr] Compiling futures-core v0.3.25 [INFO] [stderr] Compiling crossbeam-utils v0.8.14 [INFO] [stderr] Compiling semver v1.0.16 [INFO] [stderr] Compiling futures-sink v0.3.25 [INFO] [stderr] Compiling memoffset v0.7.1 [INFO] [stderr] Compiling slab v0.4.7 [INFO] [stderr] Compiling futures-task v0.3.25 [INFO] [stderr] Compiling futures-channel v0.3.25 [INFO] [stderr] Compiling thiserror v1.0.38 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling crossbeam-epoch v0.9.13 [INFO] [stderr] Compiling futures-util v0.3.25 [INFO] [stderr] Compiling regex-automata v0.1.10 [INFO] [stderr] Compiling io-lifetimes v1.0.3 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling parking_lot_core v0.9.5 [INFO] [stderr] Compiling rustix v0.36.5 [INFO] [stderr] Compiling heck v0.4.0 [INFO] [stderr] Compiling ryu v1.0.12 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling crossbeam-queue v0.3.8 [INFO] [stderr] Compiling futures-io v0.3.25 [INFO] [stderr] Compiling serde_json v1.0.91 [INFO] [stderr] Compiling cmake v0.1.49 [INFO] [stderr] Compiling once_cell v1.16.0 [INFO] [stderr] Compiling miniz_oxide v0.6.2 [INFO] [stderr] Compiling crossbeam-channel v0.5.6 [INFO] [stderr] Compiling spin v0.9.4 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling ahash v0.8.2 [INFO] [stderr] Compiling itoa v1.0.5 [INFO] [stderr] Compiling regex-syntax v0.6.28 [INFO] [stderr] Compiling rstest_macros v0.14.0 [INFO] [stderr] Compiling iana-time-zone v0.1.53 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling bytes v1.3.0 [INFO] [stderr] Compiling crossbeam-deque v0.8.2 [INFO] [stderr] Compiling anyhow v1.0.68 [INFO] [stderr] Compiling buf_redux v0.8.4 [INFO] [stderr] Compiling clap_lex v0.3.0 [INFO] [stderr] Compiling either v1.8.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling thousands v0.2.0 [INFO] [stderr] Compiling futures-timer v3.0.2 [INFO] [stderr] Compiling libdeflate-sys v0.7.5 [INFO] [stderr] Compiling quote v1.0.23 [INFO] [stderr] Compiling libz-ng-sys v1.1.8 [INFO] [stderr] Compiling libmimalloc-sys v0.1.28 [INFO] [stderr] Compiling crossbeam v0.8.2 [INFO] [stderr] Compiling scoped_threadpool v0.1.9 [INFO] [stderr] Compiling proglog v0.3.0 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling bstr v1.1.0 [INFO] [stderr] Compiling getrandom v0.2.8 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling nanorand v0.7.0 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling parking_lot v0.12.1 [INFO] [stderr] Compiling chrono v0.4.23 [INFO] [stderr] Compiling mimalloc v0.1.32 [INFO] [stderr] Compiling regex v1.7.0 [INFO] [stderr] Compiling libdeflater v0.7.5 [INFO] [stderr] Compiling is-terminal v0.4.1 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling thiserror-impl v1.0.38 [INFO] [stderr] Compiling futures-macro v0.3.25 [INFO] [stderr] Compiling pin-project-internal v1.0.12 [INFO] [stderr] Compiling clap_derive v4.0.21 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling enum_dispatch v0.3.8 [INFO] [stderr] Compiling pin-project v1.0.12 [INFO] [stderr] Compiling flume v0.10.14 [INFO] [stderr] Compiling clap v4.0.29 [INFO] [stderr] Compiling bgzf v0.2.0 [INFO] [stderr] Compiling pooled-writer v0.3.0 [INFO] [stderr] Compiling futures-executor v0.3.25 [INFO] [stderr] Compiling futures v0.3.25 [INFO] [stderr] Compiling rstest v0.15.0 [INFO] [stderr] Compiling flate2 v1.0.25 [INFO] [stderr] Compiling bstr v0.2.17 [INFO] [stderr] Compiling seq_io v0.3.1 [INFO] [stderr] Compiling csv v1.1.6 [INFO] [stderr] Compiling read-structure v0.1.0 [INFO] [stderr] Compiling serde-aux v4.1.2 [INFO] [stderr] Compiling fgoxide v0.3.0 [INFO] [stderr] Compiling fqtk v0.3.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:98:26 [INFO] [stdout] | [INFO] [stdout] 98 | fn template_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 98 | fn template_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:104:32 [INFO] [stdout] | [INFO] [stdout] 104 | fn sample_barcode_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 104 | fn sample_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:110:35 [INFO] [stdout] | [INFO] [stdout] 110 | fn molecular_barcode_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 110 | fn molecular_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 29.39s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "d9de035d87a6748516b672e869b47a165fec6888792d8d321a56938eddb35102", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d9de035d87a6748516b672e869b47a165fec6888792d8d321a56938eddb35102", kill_on_drop: false }` [INFO] [stdout] d9de035d87a6748516b672e869b47a165fec6888792d8d321a56938eddb35102 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 60b996e71aaa987311adc22bad30614f5f7492496622fc91a2735cf12788be35 [INFO] running `Command { std: "docker" "start" "-a" "60b996e71aaa987311adc22bad30614f5f7492496622fc91a2735cf12788be35", kill_on_drop: false }` [INFO] [stderr] Compiling fastrand v1.8.0 [INFO] [stderr] Compiling remove_dir_all v0.5.3 [INFO] [stderr] Compiling tempfile v3.3.0 [INFO] [stderr] Compiling fqtk v0.3.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:98:26 [INFO] [stdout] | [INFO] [stdout] 98 | fn template_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 98 | fn template_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:104:32 [INFO] [stdout] | [INFO] [stdout] 104 | fn sample_barcode_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 104 | fn sample_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/bin/commands/demux.rs:110:35 [INFO] [stdout] | [INFO] [stdout] 110 | fn molecular_barcode_segments(&self) -> SegmentIter { [INFO] [stdout] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 110 | fn molecular_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.35s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] running `Command { std: "docker" "inspect" "60b996e71aaa987311adc22bad30614f5f7492496622fc91a2735cf12788be35", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "60b996e71aaa987311adc22bad30614f5f7492496622fc91a2735cf12788be35", kill_on_drop: false }` [INFO] [stdout] 60b996e71aaa987311adc22bad30614f5f7492496622fc91a2735cf12788be35 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] c06a3f54d4a9143a9cddab936451d1b8835780506d4154c284f71bf30e58797b [INFO] running `Command { std: "docker" "start" "-a" "c06a3f54d4a9143a9cddab936451d1b8835780506d4154c284f71bf30e58797b", kill_on_drop: false }` [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/bin/commands/demux.rs:98:26 [INFO] [stderr] | [INFO] [stderr] 98 | fn template_segments(&self) -> SegmentIter { [INFO] [stderr] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 98 | fn template_segments(&self) -> SegmentIter<'_> { [INFO] [stderr] | ++++ [INFO] [stderr] [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/bin/commands/demux.rs:104:32 [INFO] [stderr] | [INFO] [stderr] 104 | fn sample_barcode_segments(&self) -> SegmentIter { [INFO] [stderr] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 104 | fn sample_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stderr] | ++++ [INFO] [stderr] [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/bin/commands/demux.rs:110:35 [INFO] [stderr] | [INFO] [stderr] 110 | fn molecular_barcode_segments(&self) -> SegmentIter { [INFO] [stderr] | ^^^^^ ----------- the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 110 | fn molecular_barcode_segments(&self) -> SegmentIter<'_> { [INFO] [stderr] | ++++ [INFO] [stderr] [INFO] [stderr] warning: `fqtk` (bin "fqtk" test) generated 3 warnings [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: buf_redux v0.8.4 [INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2` [INFO] [stderr] Running unittests src/lib/mod.rs (/opt/rustwide/target/debug/deps/fqtk_lib-0e973d4bb67efe3f) [INFO] [stdout] [INFO] [stdout] running 51 tests [INFO] [stdout] test barcode_matching::tests::empty_string_can_run_in_count_mismatches ... ok [INFO] [stdout] test barcode_matching::tests::find_two_mismatches ... ok [INFO] [stdout] test barcode_matching::tests::find_no_mismatches ... ok [INFO] [stdout] test barcode_matching::tests::not_count_no_calls ... ok [INFO] [stdout] test barcode_matching::tests::ns_in_expected_barcode_dont_contribute_to_mismatch_counter ... ok [INFO] [stdout] test barcode_matching::tests::find_compare_two_sequences_that_have_all_mismatches ... ok [INFO] [stdout] test barcode_matching::tests::all_ns_barcode_have_no_mismatches ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_exact_match::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_imprecise_match_with_no_call::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_too_many_mismatches::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_imprecise_match::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_within_mismatch_delta::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_imprecise_match::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_precise_match_with_no_call::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_precise_match_with_no_call::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_too_many_mismatches_via_nocalls::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_imprecise_match_with_no_call::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_sample_no_call_doesnt_contribute_to_mismatch_number::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_sample_no_call_doesnt_contribute_to_mismatch_number::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_instantiation_can_succeed::case_1 ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_instantiation_can_succeed::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_within_mismatch_delta::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_too_many_mismatches_via_nocalls::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_read_no_call_contributes_to_mismatch_number::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_produce_no_match_if_too_many_mismatches::case_2 ... ok [INFO] [stdout] test barcode_matching::tests::test_read_no_call_contributes_to_mismatch_number::case_1 ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_pass1_single_sample ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_pass2_multi_unique_samples ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_pass3_ordinal_values_will_be_changed_by_new ... ok [INFO] [stdout] test samples::tests::test_new_sample_non_agct_bases_in_barcode_allowed ... ok [INFO] [stdout] test samples::tests::test_new_sample_success ... ok [INFO] [stdout] test barcode_matching::tests::test_assign_exact_match::case_1 ... ok [INFO] [stdout] test samples::tests::test_reading_from_file_with_empty_lines_at_end ... ok [INFO] [stdout] test samples::tests::test_reading_from_file_with_no_header ... ok [INFO] [stdout] test tests::test_byte_is_no_call ... ok [INFO] [stdout] test samples::tests::test_reading_non_existent_file ... ok [INFO] [stdout] test samples::tests::test_reading_from_tsv_file ... ok [INFO] [stdout] test tests::test_is_valid_base ... ok [INFO] [stdout] test barcode_matching::tests::find_compare_two_sequences_of_different_length - should panic ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_fails_if_empty_sample_barcode_provided::case_1 - should panic ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_fails_if_no_sample_barcodes_provided::case_1 - should panic ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_fails_if_no_sample_barcodes_provided::case_2 - should panic ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_fail1_no_samples - should panic ... ok [INFO] [stdout] test barcode_matching::tests::test_barcode_matcher_fails_if_empty_sample_barcode_provided::case_2 - should panic ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_fail3_duplicate_sample_names - should panic ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_fail2_duplicate_barcodes - should panic ... ok [INFO] [stdout] test samples::tests::test_from_samples_sample_group_fail4_barcodes_of_different_lengths - should panic ... ok [INFO] [stdout] test samples::tests::test_new_sample_fail1_empty_sample_name - should panic ... ok [INFO] [stdout] test samples::tests::test_new_sample_fail2_empty_barcode - should panic ... ok [INFO] [stdout] test samples::tests::test_reading_empty_file - should panic ... ok [INFO] [stdout] test samples::tests::test_reading_header_only_file - should panic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 51 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/main.rs (/opt/rustwide/target/debug/deps/fqtk-963ecaf5e4cc55cb) [INFO] [stdout] [INFO] [stdout] running 31 tests [INFO] [stdout] test commands::demux::tests::test_combine_readsets ... ok [INFO] [stdout] test commands::demux::tests::test_molecular_barcode_segments ... ok [INFO] [stdout] test commands::demux::tests::test_demux_with_catchall_barcode ... ok [INFO] [stdout] test commands::demux::tests::test_demux_fragment_reads ... ok [INFO] [stdout] test commands::demux::tests::test_demux_dual_indexed_paired_end_reads ... ok [INFO] [stdout] test commands::demux::tests::test_sample_barcode_segments ... ok [INFO] [stdout] test commands::demux::tests::test_demux_a_read_structure_with_multiple_templates_in_one_read ... ok [INFO] [stdout] test commands::demux::tests::test_sample_barcode_sequence ... ok [INFO] [stdout] test commands::demux::tests::test_template_segments ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_append_barcode_and_umi ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_comment_too_few_parts ... ok [INFO] [stdout] test commands::demux::tests::test_demux_paired_reads_with_in_line_sample_barcodes ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_short_name_no_comment ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_standard_no_umi ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_standard_with_umi ... ok [INFO] [stdout] test commands::demux::tests::test_demux_a_wierd_set_of_reads ... ok [INFO] [stdout] test commands::demux::tests::test_demux_with_ns_in_barcode ... ok [INFO] [stdout] test commands::demux::tests::test_output_type_reads ... ok [INFO] [stdout] test commands::demux::tests::test_skip_reads_too_short ... ok [INFO] [stdout] test commands::demux::tests::validate_inputs_can_succeed ... ok [INFO] [stdout] test commands::demux::tests::test_combine_readsets_fails_on_empty_vector - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_fails_if_zero_read_structures_have_template_bases - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_fails_if_too_many_fastq_records_are_passed - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_different_number_of_read_structs_and_inputs_fails::case_2 - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_fails_if_not_enough_fastq_records_are_passed - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_inputs_doesnt_exist_fails - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_different_number_of_read_structs_and_inputs_fails::case_1 - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_read_only_output_dir_fails - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_too_few_threads_fails - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_write_header_name_too_many_parts - should panic ... ok [INFO] [stdout] test commands::demux::tests::test_fails_if_reads_too_short - should panic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 31 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.25s [INFO] [stdout] [INFO] [stderr] Doc-tests fqtk_lib [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "c06a3f54d4a9143a9cddab936451d1b8835780506d4154c284f71bf30e58797b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c06a3f54d4a9143a9cddab936451d1b8835780506d4154c284f71bf30e58797b", kill_on_drop: false }` [INFO] [stdout] c06a3f54d4a9143a9cddab936451d1b8835780506d4154c284f71bf30e58797b