[INFO] cloning repository https://github.com/rmhubley/BLAST_gapalign [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/rmhubley/BLAST_gapalign" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8beb37fa8be0666f90cb1470698728022d16bf98 [INFO] testing rmhubley/BLAST_gapalign against 1.90.0 for beta-1.91-3 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Frmhubley%2FBLAST_gapalign" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/rmhubley/BLAST_gapalign [INFO] finished tweaking git repo https://github.com/rmhubley/BLAST_gapalign [INFO] tweaked toml for git repo https://github.com/rmhubley/BLAST_gapalign written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/rmhubley/BLAST_gapalign on toolchain 1.90.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/rmhubley/BLAST_gapalign already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] bfc5dd21731d656bc892f006c310e5dfc58b1c910cb1268568b33612df49b04d [INFO] running `Command { std: "docker" "start" "-a" "bfc5dd21731d656bc892f006c310e5dfc58b1c910cb1268568b33612df49b04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "bfc5dd21731d656bc892f006c310e5dfc58b1c910cb1268568b33612df49b04d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bfc5dd21731d656bc892f006c310e5dfc58b1c910cb1268568b33612df49b04d", kill_on_drop: false }` [INFO] [stdout] bfc5dd21731d656bc892f006c310e5dfc58b1c910cb1268568b33612df49b04d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 25ea7485fec0fcd5efadd15d060fadafb57b4dec1aa38c1a4fb3564b02d2059b [INFO] running `Command { std: "docker" "start" "-a" "25ea7485fec0fcd5efadd15d060fadafb57b4dec1aa38c1a4fb3564b02d2059b", kill_on_drop: false }` [INFO] [stderr] Compiling blast_gapalign v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.41s [INFO] running `Command { std: "docker" "inspect" "25ea7485fec0fcd5efadd15d060fadafb57b4dec1aa38c1a4fb3564b02d2059b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "25ea7485fec0fcd5efadd15d060fadafb57b4dec1aa38c1a4fb3564b02d2059b", kill_on_drop: false }` [INFO] [stdout] 25ea7485fec0fcd5efadd15d060fadafb57b4dec1aa38c1a4fb3564b02d2059b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 146e4fdc12a5100d0b55eb463cb7ae567a112b06b71661483e46abe6ae9b471a [INFO] running `Command { std: "docker" "start" "-a" "146e4fdc12a5100d0b55eb463cb7ae567a112b06b71661483e46abe6ae9b471a", kill_on_drop: false }` [INFO] [stderr] Compiling blast_gapalign v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.68s [INFO] running `Command { std: "docker" "inspect" "146e4fdc12a5100d0b55eb463cb7ae567a112b06b71661483e46abe6ae9b471a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "146e4fdc12a5100d0b55eb463cb7ae567a112b06b71661483e46abe6ae9b471a", kill_on_drop: false }` [INFO] [stdout] 146e4fdc12a5100d0b55eb463cb7ae567a112b06b71661483e46abe6ae9b471a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] d153a1b0e162d7ea5b5252be30edbd19cd341d0b8c4cabd146a46affa672ea2b [INFO] running `Command { std: "docker" "start" "-a" "d153a1b0e162d7ea5b5252be30edbd19cd341d0b8c4cabd146a46affa672ea2b", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/blast_gapalign-1453b26ada1938de) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_align_ex_extended_gap ... ok [INFO] [stdout] test tests::test_align_ex_alu3_sub ... ok [INFO] [stdout] test tests::test_align_ex_left_right_extension ... ok [INFO] [stdout] test tests::test_align_ex_complex_left_aligned ... ok [INFO] [stdout] test tests::test_align_ex_alu1 ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stderr] Doc-tests blast_gapalign [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "d153a1b0e162d7ea5b5252be30edbd19cd341d0b8c4cabd146a46affa672ea2b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d153a1b0e162d7ea5b5252be30edbd19cd341d0b8c4cabd146a46affa672ea2b", kill_on_drop: false }` [INFO] [stdout] d153a1b0e162d7ea5b5252be30edbd19cd341d0b8c4cabd146a46affa672ea2b