[INFO] cloning repository https://github.com/stela2502/bam_tide
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/stela2502/bam_tide" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_tide", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_tide'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] e64ac02708b743ad37ae0bcea3a25bb9bcc35fec
[INFO] testing stela2502/bam_tide against 1.90.0 for beta-1.91-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fstela2502%2Fbam_tide" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/stela2502/bam_tide
[INFO] finished tweaking git repo https://github.com/stela2502/bam_tide
[INFO] tweaked toml for git repo https://github.com/stela2502/bam_tide written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/stela2502/bam_tide on toolchain 1.90.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/stela2502/bam_tide already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/stela2502/cigar.git`
[INFO] [stderr]     Updating git repository `https://github.com/stela2502/int_to_str`
[INFO] [stderr]     Updating git repository `https://github.com/stela2502/mapping_info`
[INFO] [stderr]     Updating git repository `https://github.com/stela2502/scdata`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded num-format v0.4.4
[INFO] [stderr]   Downloaded ieee754 v0.2.6
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[INFO] [stderr]   Downloaded curl-sys v0.4.82+curl-8.14.1
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] [stderr]   Downloaded openssl-src v300.5.1+3.5.1
[INFO] [stderr]   Downloaded bigtools v0.5.6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ab00943fb532e905ab0be90660b5dc4192b8bdf44d83fa2624fc9326d8a1a8b8
[INFO] running `Command { std: "docker" "start" "-a" "ab00943fb532e905ab0be90660b5dc4192b8bdf44d83fa2624fc9326d8a1a8b8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ab00943fb532e905ab0be90660b5dc4192b8bdf44d83fa2624fc9326d8a1a8b8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ab00943fb532e905ab0be90660b5dc4192b8bdf44d83fa2624fc9326d8a1a8b8", kill_on_drop: false }`
[INFO] [stdout] ab00943fb532e905ab0be90660b5dc4192b8bdf44d83fa2624fc9326d8a1a8b8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0a9cda4874eba3dfcc0693a31773ed0dc45786f62990e4480fb5421984b01a9b
[INFO] running `Command { std: "docker" "start" "-a" "0a9cda4874eba3dfcc0693a31773ed0dc45786f62990e4480fb5421984b01a9b", kill_on_drop: false }`
[INFO] [stderr]    Compiling glob v0.3.2
[INFO] [stderr]    Compiling smallvec v1.15.1
[INFO] [stderr]    Compiling memchr v2.7.5
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[INFO] [stderr]    Compiling getrandom v0.2.16
[INFO] [stderr]    Compiling either v1.15.0
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[INFO] [stderr]    Compiling cc v1.2.29
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[INFO] [stderr]    Compiling percent-encoding v2.3.1
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[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling bitflags v2.9.1
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling rustversion v1.0.21
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling icu_normalizer v2.0.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling form_urlencoded v1.2.1
[INFO] [stderr]    Compiling rustix v1.0.7
[INFO] [stderr]    Compiling futures-util v0.3.31
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[INFO] [stderr]    Compiling nom v7.1.3
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[INFO] [stderr]    Compiling arrayvec v0.7.6
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[INFO] [stderr]    Compiling chrono v0.4.41
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[INFO] [stderr]    Compiling url v2.5.4
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[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling curl-sys v0.4.82+curl-8.14.1
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling libdeflate-sys v0.13.0
[INFO] [stderr]    Compiling indicatif v0.18.0
[INFO] [stderr]    Compiling clap v4.5.40
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling tempfile v3.22.0
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling bincode v1.3.3
[INFO] [stderr]    Compiling futures-executor v0.3.31
[INFO] [stderr]    Compiling crossbeam-channel v0.5.15
[INFO] [stderr]    Compiling index_list v0.2.16
[INFO] [stderr]    Compiling mapping_info v0.1.0 (https://github.com/stela2502/mapping_info#d5d2185e)
[INFO] [stderr]    Compiling futures v0.3.31
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling int_to_str v0.1.0 (https://github.com/stela2502/int_to_str#c961fc73)
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling scdata v0.1.0 (https://github.com/stela2502/scdata#85431205)
[INFO] [stderr]    Compiling directories v5.0.1
[INFO] [stderr]    Compiling cigar v0.1.0 (https://github.com/stela2502/cigar.git#5d434d47)
[INFO] [stderr]    Compiling ufmt-macros v0.3.0
[INFO] [stderr]    Compiling ufmt v0.2.0
[INFO] [stderr]    Compiling libdeflater v0.13.0
[INFO] [stderr]    Compiling rustls v0.21.12
[INFO] [stderr]    Compiling sct v0.7.1
[INFO] [stderr]    Compiling rustls-webpki v0.101.7
[INFO] [stderr]    Compiling webpki v0.22.4
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]    Compiling attohttpc v0.25.0
[INFO] [stderr]    Compiling bigtools v0.5.6
[INFO] [stderr]    Compiling rust-htslib v0.49.0
[INFO] [stderr]    Compiling bam_tide v0.4.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `scdata::scdata::MatrixValueType`
[INFO] [stdout]   --> src/mutation_processor.rs:18:5
[INFO] [stdout]    |
[INFO] [stdout] 18 | use scdata::scdata::MatrixValueType;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `min_mapping_quality`
[INFO] [stdout]    --> src/bed_data/bed_data.rs:259:73
[INFO] [stdout]     |
[INFO] [stdout] 259 |         cell_tag: &[u8;2], umi_tag: &[u8;2], add_introns:bool, only_r1: bool, min_mapping_quality:u8 ) {
[INFO] [stdout]     |                                                                               ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_min_mapping_quality`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 19s
[INFO] running `Command { std: "docker" "inspect" "0a9cda4874eba3dfcc0693a31773ed0dc45786f62990e4480fb5421984b01a9b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0a9cda4874eba3dfcc0693a31773ed0dc45786f62990e4480fb5421984b01a9b", kill_on_drop: false }`
[INFO] [stdout] 0a9cda4874eba3dfcc0693a31773ed0dc45786f62990e4480fb5421984b01a9b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e9184a3f4f4939c153a6f0b3330ef92642c11c33a3091b87e0cdd99ddff3a5f8
[INFO] running `Command { std: "docker" "start" "-a" "e9184a3f4f4939c153a6f0b3330ef92642c11c33a3091b87e0cdd99ddff3a5f8", kill_on_drop: false }`
[INFO] [stdout] warning: unused import: `scdata::scdata::MatrixValueType`
[INFO] [stdout]   --> src/mutation_processor.rs:18:5
[INFO] [stdout]    |
[INFO] [stdout] 18 | use scdata::scdata::MatrixValueType;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling bam_tide v0.4.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused variable: `min_mapping_quality`
[INFO] [stdout]    --> src/bed_data/bed_data.rs:259:73
[INFO] [stdout]     |
[INFO] [stdout] 259 |         cell_tag: &[u8;2], umi_tag: &[u8;2], add_introns:bool, only_r1: bool, min_mapping_quality:u8 ) {
[INFO] [stdout]     |                                                                               ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_min_mapping_quality`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::process::exit`
[INFO] [stdout]  --> tests/test-bam2mut_hist.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use std::process::exit;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::collections::HashMap`
[INFO] [stdout]    --> src/bed_data/bed_data.rs:637:9
[INFO] [stdout]     |
[INFO] [stdout] 637 |     use std::collections::HashMap;
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `std::path::Path`
[INFO] [stdout]    --> src/bed_data/bed_data.rs:804:9
[INFO] [stdout]     |
[INFO] [stdout] 804 |     use std::path::Path;
[INFO] [stdout]     |         ^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `min_mapping_quality`
[INFO] [stdout]    --> src/bed_data/bed_data.rs:259:73
[INFO] [stdout]     |
[INFO] [stdout] 259 |         cell_tag: &[u8;2], umi_tag: &[u8;2], add_introns:bool, only_r1: bool, min_mapping_quality:u8 ) {
[INFO] [stdout]     |                                                                               ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_min_mapping_quality`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 7.17s
[INFO] running `Command { std: "docker" "inspect" "e9184a3f4f4939c153a6f0b3330ef92642c11c33a3091b87e0cdd99ddff3a5f8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e9184a3f4f4939c153a6f0b3330ef92642c11c33a3091b87e0cdd99ddff3a5f8", kill_on_drop: false }`
[INFO] [stdout] e9184a3f4f4939c153a6f0b3330ef92642c11c33a3091b87e0cdd99ddff3a5f8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] e13e3d8702b6a9df9e812e4ec657544a1843549aee42e9f9411b0c7d3d29a2e6
[INFO] running `Command { std: "docker" "start" "-a" "e13e3d8702b6a9df9e812e4ec657544a1843549aee42e9f9411b0c7d3d29a2e6", kill_on_drop: false }`
[INFO] [stderr] warning: unused import: `scdata::scdata::MatrixValueType`
[INFO] [stderr]   --> src/mutation_processor.rs:18:5
[INFO] [stderr]    |
[INFO] [stderr] 18 | use scdata::scdata::MatrixValueType;
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `min_mapping_quality`
[INFO] [stderr]    --> src/bed_data/bed_data.rs:259:73
[INFO] [stderr]     |
[INFO] [stderr] 259 |         cell_tag: &[u8;2], umi_tag: &[u8;2], add_introns:bool, only_r1: bool, min_mapping_quality:u8 ) {
[INFO] [stderr]     |                                                                               ^^^^^^^^^^^^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_min_mapping_quality`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::collections::HashMap`
[INFO] [stderr]    --> src/bed_data/bed_data.rs:637:9
[INFO] [stderr]     |
[INFO] [stderr] 637 |     use std::collections::HashMap;
[INFO] [stderr]     |         ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `std::path::Path`
[INFO] [stderr]    --> src/bed_data/bed_data.rs:804:9
[INFO] [stderr]     |
[INFO] [stderr] 804 |     use std::path::Path;
[INFO] [stderr]     |         ^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `bam_tide` (lib) generated 2 warnings (run `cargo fix --lib -p bam_tide` to apply 1 suggestion)
[INFO] [stderr] warning: `bam_tide` (lib test) generated 3 warnings (1 duplicate) (run `cargo fix --lib -p bam_tide --tests` to apply 2 suggestions)
[INFO] [stderr] warning: unused import: `std::process::exit`
[INFO] [stderr]  --> tests/test-bam2mut_hist.rs:2:5
[INFO] [stderr]   |
[INFO] [stderr] 2 | use std::process::exit;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `bam_tide` (test "test-bam2mut_hist") generated 1 warning (run `cargo fix --test "test-bam2mut_hist"` to apply 1 suggestion)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.41s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/bam_tide-86c3d0065a44ed8a)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test bed_data::bed_data::tests::test_current_chr_for_id ... ok
[INFO] [stdout] test bed_data::bed_data::tests::test_display ... ok
[INFO] [stdout] test bed_data::bed_data::tests::test_genome_info_to_search_and_id_for_chr_start ... ok
[INFO] [stdout] test mutation_processor::tests::test_mutation_processor_new ... ok
[INFO] [stdout] test bed_data::bed_data::tests::test_normalize_not_and_cpm_and_bpm_and_rpkm ... ok
[INFO] [stdout] test bed_data::bed_data::tests::test_write_bigwig_creates_file ... ok
[INFO] [stdout] test bed_data::bed_data::tests::test_value_flat ... ok
[INFO] [stdout] test mutation_processor::tests::test_handle_mutations ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- mutation_processor::tests::test_handle_mutations stdout ----
[INFO] [stdout] Error?: Os {
[INFO] [stdout]     code: 30,
[INFO] [stdout]     kind: ReadOnlyFilesystem,
[INFO] [stdout]     message: "Read-only file system",
[INFO] [stdout] }
[INFO] [stdout] 
[INFO] [stdout] thread 'mutation_processor::tests::test_handle_mutations' panicked at src/mutation_processor.rs:456:56:
[INFO] [stdout] Failed to write sparse matrix: "Error creating the path?: Os {\n    code: 2,\n    kind: NotFound,\n    message: \"No such file or directory\",\n}"
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x63192be3e152 - std::backtrace_rs::backtrace::libunwind::trace::h2d45396358f41939
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x63192be3e152 - std::backtrace_rs::backtrace::trace_unsynchronized::hffcefc0b67f1d6e2
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x63192be3e152 - std::sys::backtrace::_print_fmt::hd72f71d23b436b92
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x63192be3e152 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::hdcfcb6d4c8489523
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x63192be65cc3 - core::fmt::rt::Argument::fmt::h2c56b3114963061a
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/fmt/rt.rs:173:76
[INFO] [stdout]    5:     0x63192be65cc3 - core::fmt::write::h8a494366950f23bb
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/fmt/mod.rs:1468:25
[INFO] [stdout]    6:     0x63192be3ad63 - std::io::default_write_fmt::h7b8824096454f323
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x63192be3ad63 - std::io::Write::write_fmt::h4e71294925c334d0
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/io/mod.rs:1954:13
[INFO] [stdout]    8:     0x63192be3dfa2 - std::sys::backtrace::BacktraceLock::print::hb2a626a81e06b2dc
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    9:     0x63192be3f829 - std::panicking::default_hook::{{closure}}::h4f78485264f12d10
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:300:27
[INFO] [stdout]   10:     0x63192be3f65e - std::panicking::default_hook::h2c66fc99e962531d
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:324:9
[INFO] [stdout]   11:     0x63192b495164 - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::hb6bd65493727d71a
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/alloc/src/boxed.rs:1985:9
[INFO] [stdout]   12:     0x63192b495164 - test::test_main_with_exit_callback::{{closure}}::h60217ec76a0ece4a
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x63192be402fe - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h318e4efb8c1a5689
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/alloc/src/boxed.rs:1985:9
[INFO] [stdout]   14:     0x63192be402fe - std::panicking::rust_panic_with_hook::h33ac55f64bbd807d
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:841:13
[INFO] [stdout]   15:     0x63192be3ffca - std::panicking::begin_panic_handler::{{closure}}::h30e7cb89678a57fe
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:706:13
[INFO] [stdout]   16:     0x63192be3e659 - std::sys::backtrace::__rust_end_short_backtrace::hed60f27456c16ced
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/backtrace.rs:174:18
[INFO] [stdout]   17:     0x63192be3fc5d - __rustc[de2ca18b4c54d5b8]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:697:5
[INFO] [stdout]   18:     0x63192be63c90 - core::panicking::panic_fmt::h62f63d096dd276af
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/panicking.rs:75:14
[INFO] [stdout]   19:     0x63192be64156 - core::result::unwrap_failed::h95bc3f5a607b2c95
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/result.rs:1765:5
[INFO] [stdout]   20:     0x63192b44b3de - core::result::Result<T,E>::expect::hffea3a06b247f0b9
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/result.rs:1119:23
[INFO] [stdout]   21:     0x63192b41e88b - bam_tide::mutation_processor::tests::test_handle_mutations::h1e099faa035b8c82
[INFO] [stdout]                                at /opt/rustwide/workdir/src/mutation_processor.rs:456:56
[INFO] [stdout]   22:     0x63192b41def7 - bam_tide::mutation_processor::tests::test_handle_mutations::{{closure}}::h89d100d70ec3f1c1
[INFO] [stdout]                                at /opt/rustwide/workdir/src/mutation_processor.rs:376:31
[INFO] [stdout]   23:     0x63192b41b686 - core::ops::function::FnOnce::call_once::h8882e8c7aef231e0
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/ops/function.rs:253:5
[INFO] [stdout]   24:     0x63192b49a9cb - core::ops::function::FnOnce::call_once::h1f9474f1347fff52
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/ops/function.rs:253:5
[INFO] [stdout]   25:     0x63192b49a9cb - test::__rust_begin_short_backtrace::ha52ab26e77157f03
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:648:18
[INFO] [stdout]   26:     0x63192b499b05 - test::run_test_in_process::{{closure}}::h229c1a11a50b261f
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:671:74
[INFO] [stdout]   27:     0x63192b499b05 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h78821afbf97b39a9
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   28:     0x63192b499b05 - std::panicking::catch_unwind::do_call::h53abf3ed5bd32ba3
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:589:40
[INFO] [stdout]   29:     0x63192b499b05 - std::panicking::catch_unwind::h6deb5fe1e91873c9
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:552:19
[INFO] [stdout]   30:     0x63192b499b05 - std::panic::catch_unwind::hea0829b6b565654b
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x63192b499b05 - test::run_test_in_process::hdc44dfecea3db21b
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:671:27
[INFO] [stdout]   32:     0x63192b499b05 - test::run_test::{{closure}}::h0364ba59bf23f652
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:592:43
[INFO] [stdout]   33:     0x63192b45d704 - test::run_test::{{closure}}::h32730b304eec05da
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/test/src/lib.rs:622:41
[INFO] [stdout]   34:     0x63192b45d704 - std::sys::backtrace::__rust_begin_short_backtrace::h177cb952fc54ad2c
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/backtrace.rs:158:18
[INFO] [stdout]   35:     0x63192b4610da - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h119d903520007597
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/thread/mod.rs:559:17
[INFO] [stdout]   36:     0x63192b4610da - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::hab88401d606702a6
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/panic/unwind_safe.rs:272:9
[INFO] [stdout]   37:     0x63192b4610da - std::panicking::catch_unwind::do_call::h163fe12cca9901c2
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:589:40
[INFO] [stdout]   38:     0x63192b4610da - std::panicking::catch_unwind::he81557d0e17cc1bc
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panicking.rs:552:19
[INFO] [stdout]   39:     0x63192b4610da - std::panic::catch_unwind::hc2b8e79c20593955
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x63192b4610da - std::thread::Builder::spawn_unchecked_::{{closure}}::hfa6b4978e07815cc
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/thread/mod.rs:557:30
[INFO] [stdout]   41:     0x63192b4610da - core::ops::function::FnOnce::call_once{{vtable.shim}}::hddcd7484a13fd793
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/core/src/ops/function.rs:253:5
[INFO] [stdout]   42:     0x63192be43abf - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h5924238c754de3b8
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/alloc/src/boxed.rs:1971:9
[INFO] [stdout]   43:     0x63192be43abf - std::sys::pal::unix::thread::Thread::new::thread_start::hb6e99e73da4d28f8
[INFO] [stdout]                                at /rustc/1159e78c4747b02ef996e55082b704c09b970588/library/std/src/sys/pal/unix/thread.rs:107:17
[INFO] [stdout]   44:     0x75f0f3e10aa4 - <unknown>
[INFO] [stdout]   45:     0x75f0f3e9da34 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     mutation_processor::tests::test_handle_mutations
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 7 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.23s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] running `Command { std: "docker" "inspect" "e13e3d8702b6a9df9e812e4ec657544a1843549aee42e9f9411b0c7d3d29a2e6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e13e3d8702b6a9df9e812e4ec657544a1843549aee42e9f9411b0c7d3d29a2e6", kill_on_drop: false }`
[INFO] [stdout] e13e3d8702b6a9df9e812e4ec657544a1843549aee42e9f9411b0c7d3d29a2e6
