[INFO] cloning repository https://github.com/menixator/biocomputation
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/menixator/biocomputation" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmenixator%2Fbiocomputation", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmenixator%2Fbiocomputation'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] fce4c70f5865d933893abf7751e20b28ec7e3fd5
[INFO] testing menixator/biocomputation against beta-2025-09-21 for beta-1.91-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmenixator%2Fbiocomputation" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/menixator/biocomputation
[INFO] finished tweaking git repo https://github.com/menixator/biocomputation
[INFO] tweaked toml for git repo https://github.com/menixator/biocomputation written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/menixator/biocomputation on toolchain beta-2025-09-21
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/menixator/biocomputation already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-09-21" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 8e999b8fd25e9c1c2afce4b05e855ab64564124b0c459600508fb7ec3beecc10
[INFO] running `Command { std: "docker" "start" "-a" "8e999b8fd25e9c1c2afce4b05e855ab64564124b0c459600508fb7ec3beecc10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "8e999b8fd25e9c1c2afce4b05e855ab64564124b0c459600508fb7ec3beecc10", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8e999b8fd25e9c1c2afce4b05e855ab64564124b0c459600508fb7ec3beecc10", kill_on_drop: false }`
[INFO] [stdout] 8e999b8fd25e9c1c2afce4b05e855ab64564124b0c459600508fb7ec3beecc10
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3001bbc74d70228c477f6bdbfc1fd19c26c5dae92bbe3c2ca39175193c2c3499
[INFO] running `Command { std: "docker" "start" "-a" "3001bbc74d70228c477f6bdbfc1fd19c26c5dae92bbe3c2ca39175193c2c3499", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.19
[INFO] [stderr]    Compiling unicode-xid v0.2.1
[INFO] [stderr]    Compiling syn v1.0.39
[INFO] [stderr]    Compiling libc v0.2.76
[INFO] [stderr]    Compiling version_check v0.9.2
[INFO] [stderr]    Compiling getrandom v0.1.14
[INFO] [stderr]    Compiling serde_derive v1.0.115
[INFO] [stderr]    Compiling cfg-if v0.1.10
[INFO] [stderr]    Compiling memchr v2.3.3
[INFO] [stderr]    Compiling bitflags v1.2.1
[INFO] [stderr]    Compiling unicode-width v0.1.8
[INFO] [stderr]    Compiling serde v1.0.115
[INFO] [stderr]    Compiling unicode-segmentation v1.6.0
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling ryu v1.0.5
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling ansi_term v0.11.0
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling strsim v0.8.0
[INFO] [stderr]    Compiling ppv-lite86 v0.2.9
[INFO] [stderr]    Compiling serde_json v1.0.57
[INFO] [stderr]    Compiling aho-corasick v0.7.13
[INFO] [stderr]    Compiling quote v1.0.7
[INFO] [stderr]    Compiling heck v0.3.1
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling thread_local v1.0.1
[INFO] [stderr]    Compiling clap v2.33.3
[INFO] [stderr]    Compiling regex-syntax v0.6.18
[INFO] [stderr]    Compiling itoa v0.4.6
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling regex v1.3.9
[INFO] [stderr]    Compiling structopt-derive v0.4.10
[INFO] [stderr]    Compiling thiserror-impl v1.0.20
[INFO] [stderr]    Compiling thiserror v1.0.20
[INFO] [stderr]    Compiling structopt v0.3.17
[INFO] [stderr]    Compiling biocomputation v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused imports: `Deserialize` and `Serialize`
[INFO] [stdout]  --> src/main.rs:1:13
[INFO] [stdout]   |
[INFO] [stdout] 1 | use serde::{Deserialize, Serialize};
[INFO] [stdout]   |             ^^^^^^^^^^^  ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `serde_json`
[INFO] [stdout]  --> src/main.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use serde_json;
[INFO] [stdout]   |     ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Serialize`
[INFO] [stdout]  --> src/ga_spec.rs:4:26
[INFO] [stdout]   |
[INFO] [stdout] 4 | use serde::{Deserialize, Serialize};
[INFO] [stdout]   |                          ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::dataitem::DataItem`
[INFO] [stdout]  --> src/population.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | use crate::dataitem::DataItem;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Display`
[INFO] [stdout]  --> src/rule.rs:4:29
[INFO] [stdout]   |
[INFO] [stdout] 4 | use std::fmt::{self, Debug, Display};
[INFO] [stdout]   |                             ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::candidate::Candidate`
[INFO] [stdout]  --> src/selection.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use crate::candidate::Candidate;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `CrossoverStrategyCommonOptions`, `CrossoverStrategy`, `MatchupStrategy`, `MatingStrategy`, and `MirroringStrategy`
[INFO] [stdout]   --> src/main.rs:19:5
[INFO] [stdout]    |
[INFO] [stdout] 19 |     CrossoverStrategy, CrossoverStrategyCommonOptions, MatchupStrategy, MatingStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^
[INFO] [stdout] 20 |     MirroringStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `MutationStrategyCommonOptions`, `MutationStrategyVariant`, and `MutationStrategy`
[INFO] [stdout]   --> src/main.rs:22:16
[INFO] [stdout]    |
[INFO] [stdout] 22 | use mutation::{MutationStrategy, MutationStrategyCommonOptions, MutationStrategyVariant};
[INFO] [stdout]    |                ^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `GaSpec`
[INFO] [stdout]   --> src/main.rs:24:32
[INFO] [stdout]    |
[INFO] [stdout] 24 | use ga_spec::{CalculatedSpecs, GaSpec, GaSpecInput};
[INFO] [stdout]    |                                ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `DuplicateHandlingStrategy`, `RouletteSelection`, `SelectionStrategyCommonOptions`, `SelectionStrategyVariant`, `SelectionStrategy`, and `TournamentSelection`
[INFO] [stdout]   --> src/main.rs:27:5
[INFO] [stdout]    |
[INFO] [stdout] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^             ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 28 |     SelectionStrategyCommonOptions, SelectionStrategyVariant, TournamentSelection,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Selection`
[INFO] [stdout]   --> src/main.rs:27:51
[INFO] [stdout]    |
[INFO] [stdout] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stdout]    |                                                   ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/mutation.rs:43:9
[INFO] [stdout]    |
[INFO] [stdout] 43 |         mut population: &mut Population,
[INFO] [stdout]    |         ----^^^^^^^^^^
[INFO] [stdout]    |         |
[INFO] [stdout]    |         help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/rule.rs:48:29
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn generate<T: Rng>(mut rng: &mut T, spec: &GaSpec) -> Self {
[INFO] [stdout]    |                             ----^^^
[INFO] [stdout]    |                             |
[INFO] [stdout]    |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/selection.rs:94:17
[INFO] [stdout]    |
[INFO] [stdout] 94 |             for i in 0..self.tournament_size {
[INFO] [stdout]    |                 ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `test`
[INFO] [stdout]   --> src/main.rs:78:20
[INFO] [stdout]    |
[INFO] [stdout] 78 |     let (training, test) = data_set.split_at_percentage(opt.split_percentage)?;
[INFO] [stdout]    |                    ^^^^ help: if this is intentional, prefix it with an underscore: `_test`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/main.rs:95:9
[INFO] [stdout]    |
[INFO] [stdout] 95 |     for i in 0..ga_specs.max_evolutions {
[INFO] [stdout]    |         ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `candidate`
[INFO] [stdout]    --> src/main.rs:102:41
[INFO] [stdout]     |
[INFO] [stdout] 102 |         for CandidateFitness { fitness, candidate } in &fitness {
[INFO] [stdout]     |                                         ^^^^^^^^^ help: try ignoring the field: `candidate: _`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `mutation_count` is never read
[INFO] [stdout]   --> src/candidate.rs:13:5
[INFO] [stdout]    |
[INFO] [stdout] 11 | pub struct Candidate {
[INFO] [stdout]    |            --------- field in this struct
[INFO] [stdout] 12 |     rules: HashSet<Rule>,
[INFO] [stdout] 13 |     mutation_count: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Candidate` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `mutation_count`, `set_mutation_count`, `increment_mutation_count`, `age`, `birth_generation_id`, and `rules_mut` are never used
[INFO] [stdout]   --> src/candidate.rs:44:12
[INFO] [stdout]    |
[INFO] [stdout] 35 | impl Candidate {
[INFO] [stdout]    | -------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 44 |     pub fn mutation_count(&self) -> usize {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 48 |     pub fn set_mutation_count(&mut self, new_mutation_count: usize) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 52 |     pub fn increment_mutation_count(&mut self) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 56 |     pub fn age(&mut self, current_generation_id: usize) -> Option<isize> {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] ...
[INFO] [stdout] 66 |     pub fn birth_generation_id(&self) -> Option<usize> {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 74 |     pub fn rules_mut(&mut self) -> &mut HashSet<Rule> {
[INFO] [stdout]    |            ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variant `RngFail` is never constructed
[INFO] [stdout]   --> src/crossover.rs:57:5
[INFO] [stdout]    |
[INFO] [stdout] 55 | pub enum CrossoverError {
[INFO] [stdout]    |          -------------- variant in this enum
[INFO] [stdout] 56 |     #[error("rng failed to generate a unique value")]
[INFO] [stdout] 57 |     RngFail,
[INFO] [stdout]    |     ^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `CrossoverError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: method `char_at` is never used
[INFO] [stdout]   --> src/dataitem.rs:32:12
[INFO] [stdout]    |
[INFO] [stdout] 22 | impl DataItem {
[INFO] [stdout]    | ------------- method in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 32 |     pub fn char_at(&self, index: usize) -> Option<char> {
[INFO] [stdout]    |            ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variants `HeterogenousData` and `InvalidPercentage` are never constructed
[INFO] [stdout]   --> src/dataset.rs:63:5
[INFO] [stdout]    |
[INFO] [stdout] 61 | pub enum DataSetError {
[INFO] [stdout]    |          ------------ variants in this enum
[INFO] [stdout] 62 |     #[error("found different kinds of data")]
[INFO] [stdout] 63 |     HeterogenousData,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 69 |     InvalidPercentage,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `DataSetError` has derived impls for the traits `Debug` and `Clone`, but these are intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `set_generation` and `candidates_mut` are never used
[INFO] [stdout]   --> src/population.rs:31:12
[INFO] [stdout]    |
[INFO] [stdout] 22 | impl Population {
[INFO] [stdout]    | --------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 31 |     pub fn set_generation(&mut self, new_generation: usize) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     pub fn candidates_mut(&mut self) -> &mut HashSet<Candidate> {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/population.rs:71:9
[INFO] [stdout]    |
[INFO] [stdout] 71 |         &self,
[INFO] [stdout]    |         ^^^^^ the lifetime is elided here
[INFO] [stdout] 72 |         data_set: &'_ DataSet,
[INFO] [stdout] 73 |     ) -> Result<Vec<CandidateFitness>, FitnessCalculationError> {
[INFO] [stdout]    |                     ^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 73 |     ) -> Result<Vec<CandidateFitness<'_>>, FitnessCalculationError> {
[INFO] [stdout]    |                                     ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 38.61s
[INFO] running `Command { std: "docker" "inspect" "3001bbc74d70228c477f6bdbfc1fd19c26c5dae92bbe3c2ca39175193c2c3499", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3001bbc74d70228c477f6bdbfc1fd19c26c5dae92bbe3c2ca39175193c2c3499", kill_on_drop: false }`
[INFO] [stdout] 3001bbc74d70228c477f6bdbfc1fd19c26c5dae92bbe3c2ca39175193c2c3499
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0a46770a45f656ebcad52843103b628024b28771a2504202a244f9516a7f7d71
[INFO] running `Command { std: "docker" "start" "-a" "0a46770a45f656ebcad52843103b628024b28771a2504202a244f9516a7f7d71", kill_on_drop: false }`
[INFO] [stderr]    Compiling biocomputation v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused imports: `Deserialize` and `Serialize`
[INFO] [stdout]  --> src/main.rs:1:13
[INFO] [stdout]   |
[INFO] [stdout] 1 | use serde::{Deserialize, Serialize};
[INFO] [stdout]   |             ^^^^^^^^^^^  ^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `serde_json`
[INFO] [stdout]  --> src/main.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use serde_json;
[INFO] [stdout]   |     ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Serialize`
[INFO] [stdout]  --> src/ga_spec.rs:4:26
[INFO] [stdout]   |
[INFO] [stdout] 4 | use serde::{Deserialize, Serialize};
[INFO] [stdout]   |                          ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::dataitem::DataItem`
[INFO] [stdout]  --> src/population.rs:3:5
[INFO] [stdout]   |
[INFO] [stdout] 3 | use crate::dataitem::DataItem;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Display`
[INFO] [stdout]  --> src/rule.rs:4:29
[INFO] [stdout]   |
[INFO] [stdout] 4 | use std::fmt::{self, Debug, Display};
[INFO] [stdout]   |                             ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `crate::candidate::Candidate`
[INFO] [stdout]  --> src/selection.rs:1:5
[INFO] [stdout]   |
[INFO] [stdout] 1 | use crate::candidate::Candidate;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `CrossoverStrategyCommonOptions`, `CrossoverStrategy`, `MatchupStrategy`, `MatingStrategy`, and `MirroringStrategy`
[INFO] [stdout]   --> src/main.rs:19:5
[INFO] [stdout]    |
[INFO] [stdout] 19 |     CrossoverStrategy, CrossoverStrategyCommonOptions, MatchupStrategy, MatingStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^
[INFO] [stdout] 20 |     MirroringStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `MutationStrategyCommonOptions`, `MutationStrategyVariant`, and `MutationStrategy`
[INFO] [stdout]   --> src/main.rs:22:16
[INFO] [stdout]    |
[INFO] [stdout] 22 | use mutation::{MutationStrategy, MutationStrategyCommonOptions, MutationStrategyVariant};
[INFO] [stdout]    |                ^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `GaSpec`
[INFO] [stdout]   --> src/main.rs:24:32
[INFO] [stdout]    |
[INFO] [stdout] 24 | use ga_spec::{CalculatedSpecs, GaSpec, GaSpecInput};
[INFO] [stdout]    |                                ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `DuplicateHandlingStrategy`, `RouletteSelection`, `SelectionStrategyCommonOptions`, `SelectionStrategyVariant`, `SelectionStrategy`, and `TournamentSelection`
[INFO] [stdout]   --> src/main.rs:27:5
[INFO] [stdout]    |
[INFO] [stdout] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^             ^^^^^^^^^^^^^^^^^
[INFO] [stdout] 28 |     SelectionStrategyCommonOptions, SelectionStrategyVariant, TournamentSelection,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `Selection`
[INFO] [stdout]   --> src/main.rs:27:51
[INFO] [stdout]    |
[INFO] [stdout] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stdout]    |                                                   ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/mutation.rs:43:9
[INFO] [stdout]    |
[INFO] [stdout] 43 |         mut population: &mut Population,
[INFO] [stdout]    |         ----^^^^^^^^^^
[INFO] [stdout]    |         |
[INFO] [stdout]    |         help: remove this `mut`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variable does not need to be mutable
[INFO] [stdout]   --> src/rule.rs:48:29
[INFO] [stdout]    |
[INFO] [stdout] 48 |     pub fn generate<T: Rng>(mut rng: &mut T, spec: &GaSpec) -> Self {
[INFO] [stdout]    |                             ----^^^
[INFO] [stdout]    |                             |
[INFO] [stdout]    |                             help: remove this `mut`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/selection.rs:94:17
[INFO] [stdout]    |
[INFO] [stdout] 94 |             for i in 0..self.tournament_size {
[INFO] [stdout]    |                 ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `test`
[INFO] [stdout]   --> src/main.rs:78:20
[INFO] [stdout]    |
[INFO] [stdout] 78 |     let (training, test) = data_set.split_at_percentage(opt.split_percentage)?;
[INFO] [stdout]    |                    ^^^^ help: if this is intentional, prefix it with an underscore: `_test`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `i`
[INFO] [stdout]   --> src/main.rs:95:9
[INFO] [stdout]    |
[INFO] [stdout] 95 |     for i in 0..ga_specs.max_evolutions {
[INFO] [stdout]    |         ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `candidate`
[INFO] [stdout]    --> src/main.rs:102:41
[INFO] [stdout]     |
[INFO] [stdout] 102 |         for CandidateFitness { fitness, candidate } in &fitness {
[INFO] [stdout]     |                                         ^^^^^^^^^ help: try ignoring the field: `candidate: _`
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: field `mutation_count` is never read
[INFO] [stdout]   --> src/candidate.rs:13:5
[INFO] [stdout]    |
[INFO] [stdout] 11 | pub struct Candidate {
[INFO] [stdout]    |            --------- field in this struct
[INFO] [stdout] 12 |     rules: HashSet<Rule>,
[INFO] [stdout] 13 |     mutation_count: usize,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `Candidate` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis
[INFO] [stdout]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `mutation_count`, `set_mutation_count`, `increment_mutation_count`, `age`, `birth_generation_id`, and `rules_mut` are never used
[INFO] [stdout]   --> src/candidate.rs:44:12
[INFO] [stdout]    |
[INFO] [stdout] 35 | impl Candidate {
[INFO] [stdout]    | -------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 44 |     pub fn mutation_count(&self) -> usize {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 48 |     pub fn set_mutation_count(&mut self, new_mutation_count: usize) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 52 |     pub fn increment_mutation_count(&mut self) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 56 |     pub fn age(&mut self, current_generation_id: usize) -> Option<isize> {
[INFO] [stdout]    |            ^^^
[INFO] [stdout] ...
[INFO] [stdout] 66 |     pub fn birth_generation_id(&self) -> Option<usize> {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 74 |     pub fn rules_mut(&mut self) -> &mut HashSet<Rule> {
[INFO] [stdout]    |            ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variant `RngFail` is never constructed
[INFO] [stdout]   --> src/crossover.rs:57:5
[INFO] [stdout]    |
[INFO] [stdout] 55 | pub enum CrossoverError {
[INFO] [stdout]    |          -------------- variant in this enum
[INFO] [stdout] 56 |     #[error("rng failed to generate a unique value")]
[INFO] [stdout] 57 |     RngFail,
[INFO] [stdout]    |     ^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `CrossoverError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: variants `HeterogenousData` and `InvalidPercentage` are never constructed
[INFO] [stdout]   --> src/dataset.rs:63:5
[INFO] [stdout]    |
[INFO] [stdout] 61 | pub enum DataSetError {
[INFO] [stdout]    |          ------------ variants in this enum
[INFO] [stdout] 62 |     #[error("found different kinds of data")]
[INFO] [stdout] 63 |     HeterogenousData,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 69 |     InvalidPercentage,
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `DataSetError` has derived impls for the traits `Debug` and `Clone`, but these are intentionally ignored during dead code analysis
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `set_generation` and `candidates_mut` are never used
[INFO] [stdout]   --> src/population.rs:31:12
[INFO] [stdout]    |
[INFO] [stdout] 22 | impl Population {
[INFO] [stdout]    | --------------- methods in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 31 |     pub fn set_generation(&mut self, new_generation: usize) {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] ...
[INFO] [stdout] 39 |     pub fn candidates_mut(&mut self) -> &mut HashSet<Candidate> {
[INFO] [stdout]    |            ^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stdout]   --> src/population.rs:71:9
[INFO] [stdout]    |
[INFO] [stdout] 71 |         &self,
[INFO] [stdout]    |         ^^^^^ the lifetime is elided here
[INFO] [stdout] 72 |         data_set: &'_ DataSet,
[INFO] [stdout] 73 |     ) -> Result<Vec<CandidateFitness>, FitnessCalculationError> {
[INFO] [stdout]    |                     ^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stdout]    |
[INFO] [stdout]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stdout]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stdout] help: use `'_` for type paths
[INFO] [stdout]    |
[INFO] [stdout] 73 |     ) -> Result<Vec<CandidateFitness<'_>>, FitnessCalculationError> {
[INFO] [stdout]    |                                     ++++
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.35s
[INFO] running `Command { std: "docker" "inspect" "0a46770a45f656ebcad52843103b628024b28771a2504202a244f9516a7f7d71", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0a46770a45f656ebcad52843103b628024b28771a2504202a244f9516a7f7d71", kill_on_drop: false }`
[INFO] [stdout] 0a46770a45f656ebcad52843103b628024b28771a2504202a244f9516a7f7d71
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-09-21" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 821ded00a281e9af252a84fb07e20a9d9c36fd7cbe11700221adb1b848764bcb
[INFO] running `Command { std: "docker" "start" "-a" "821ded00a281e9af252a84fb07e20a9d9c36fd7cbe11700221adb1b848764bcb", kill_on_drop: false }`
[INFO] [stderr] warning: unused imports: `Deserialize` and `Serialize`
[INFO] [stderr]  --> src/main.rs:1:13
[INFO] [stderr]   |
[INFO] [stderr] 1 | use serde::{Deserialize, Serialize};
[INFO] [stderr]   |             ^^^^^^^^^^^  ^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `serde_json`
[INFO] [stderr]  --> src/main.rs:2:5
[INFO] [stderr]   |
[INFO] [stderr] 2 | use serde_json;
[INFO] [stderr]   |     ^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Serialize`
[INFO] [stderr]  --> src/ga_spec.rs:4:26
[INFO] [stderr]   |
[INFO] [stderr] 4 | use serde::{Deserialize, Serialize};
[INFO] [stderr]   |                          ^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `crate::dataitem::DataItem`
[INFO] [stderr]  --> src/population.rs:3:5
[INFO] [stderr]   |
[INFO] [stderr] 3 | use crate::dataitem::DataItem;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Display`
[INFO] [stderr]  --> src/rule.rs:4:29
[INFO] [stderr]   |
[INFO] [stderr] 4 | use std::fmt::{self, Debug, Display};
[INFO] [stderr]   |                             ^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `crate::candidate::Candidate`
[INFO] [stderr]  --> src/selection.rs:1:5
[INFO] [stderr]   |
[INFO] [stderr] 1 | use crate::candidate::Candidate;
[INFO] [stderr]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `CrossoverStrategyCommonOptions`, `CrossoverStrategy`, `MatchupStrategy`, `MatingStrategy`, and `MirroringStrategy`
[INFO] [stderr]   --> src/main.rs:19:5
[INFO] [stderr]    |
[INFO] [stderr] 19 |     CrossoverStrategy, CrossoverStrategyCommonOptions, MatchupStrategy, MatingStrategy,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^
[INFO] [stderr] 20 |     MirroringStrategy,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `MutationStrategyCommonOptions`, `MutationStrategyVariant`, and `MutationStrategy`
[INFO] [stderr]   --> src/main.rs:22:16
[INFO] [stderr]    |
[INFO] [stderr] 22 | use mutation::{MutationStrategy, MutationStrategyCommonOptions, MutationStrategyVariant};
[INFO] [stderr]    |                ^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `GaSpec`
[INFO] [stderr]   --> src/main.rs:24:32
[INFO] [stderr]    |
[INFO] [stderr] 24 | use ga_spec::{CalculatedSpecs, GaSpec, GaSpecInput};
[INFO] [stderr]    |                                ^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused imports: `DuplicateHandlingStrategy`, `RouletteSelection`, `SelectionStrategyCommonOptions`, `SelectionStrategyVariant`, `SelectionStrategy`, and `TournamentSelection`
[INFO] [stderr]   --> src/main.rs:27:5
[INFO] [stderr]    |
[INFO] [stderr] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^             ^^^^^^^^^^^^^^^^^
[INFO] [stderr] 28 |     SelectionStrategyCommonOptions, SelectionStrategyVariant, TournamentSelection,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^^^^^^  ^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused import: `Selection`
[INFO] [stderr]   --> src/main.rs:27:51
[INFO] [stderr]    |
[INFO] [stderr] 27 |     DuplicateHandlingStrategy, RouletteSelection, Selection, SelectionStrategy,
[INFO] [stderr]    |                                                   ^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]   --> src/mutation.rs:43:9
[INFO] [stderr]    |
[INFO] [stderr] 43 |         mut population: &mut Population,
[INFO] [stderr]    |         ----^^^^^^^^^^
[INFO] [stderr]    |         |
[INFO] [stderr]    |         help: remove this `mut`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: variable does not need to be mutable
[INFO] [stderr]   --> src/rule.rs:48:29
[INFO] [stderr]    |
[INFO] [stderr] 48 |     pub fn generate<T: Rng>(mut rng: &mut T, spec: &GaSpec) -> Self {
[INFO] [stderr]    |                             ----^^^
[INFO] [stderr]    |                             |
[INFO] [stderr]    |                             help: remove this `mut`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `i`
[INFO] [stderr]   --> src/selection.rs:94:17
[INFO] [stderr]    |
[INFO] [stderr] 94 |             for i in 0..self.tournament_size {
[INFO] [stderr]    |                 ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `test`
[INFO] [stderr]   --> src/main.rs:78:20
[INFO] [stderr]    |
[INFO] [stderr] 78 |     let (training, test) = data_set.split_at_percentage(opt.split_percentage)?;
[INFO] [stderr]    |                    ^^^^ help: if this is intentional, prefix it with an underscore: `_test`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `i`
[INFO] [stderr]   --> src/main.rs:95:9
[INFO] [stderr]    |
[INFO] [stderr] 95 |     for i in 0..ga_specs.max_evolutions {
[INFO] [stderr]    |         ^ help: if this is intentional, prefix it with an underscore: `_i`
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `candidate`
[INFO] [stderr]    --> src/main.rs:102:41
[INFO] [stderr]     |
[INFO] [stderr] 102 |         for CandidateFitness { fitness, candidate } in &fitness {
[INFO] [stderr]     |                                         ^^^^^^^^^ help: try ignoring the field: `candidate: _`
[INFO] [stderr] 
[INFO] [stderr] warning: field `mutation_count` is never read
[INFO] [stderr]   --> src/candidate.rs:13:5
[INFO] [stderr]    |
[INFO] [stderr] 11 | pub struct Candidate {
[INFO] [stderr]    |            --------- field in this struct
[INFO] [stderr] 12 |     rules: HashSet<Rule>,
[INFO] [stderr] 13 |     mutation_count: usize,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `Candidate` has derived impls for the traits `Clone` and `Debug`, but these are intentionally ignored during dead code analysis
[INFO] [stderr]    = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default
[INFO] [stderr] 
[INFO] [stderr] warning: methods `mutation_count`, `set_mutation_count`, `increment_mutation_count`, `age`, `birth_generation_id`, and `rules_mut` are never used
[INFO] [stderr]   --> src/candidate.rs:44:12
[INFO] [stderr]    |
[INFO] [stderr] 35 | impl Candidate {
[INFO] [stderr]    | -------------- methods in this implementation
[INFO] [stderr] ...
[INFO] [stderr] 44 |     pub fn mutation_count(&self) -> usize {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 48 |     pub fn set_mutation_count(&mut self, new_mutation_count: usize) {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 52 |     pub fn increment_mutation_count(&mut self) {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 56 |     pub fn age(&mut self, current_generation_id: usize) -> Option<isize> {
[INFO] [stderr]    |            ^^^
[INFO] [stderr] ...
[INFO] [stderr] 66 |     pub fn birth_generation_id(&self) -> Option<usize> {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 74 |     pub fn rules_mut(&mut self) -> &mut HashSet<Rule> {
[INFO] [stderr]    |            ^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: variant `RngFail` is never constructed
[INFO] [stderr]   --> src/crossover.rs:57:5
[INFO] [stderr]    |
[INFO] [stderr] 55 | pub enum CrossoverError {
[INFO] [stderr]    |          -------------- variant in this enum
[INFO] [stderr] 56 |     #[error("rng failed to generate a unique value")]
[INFO] [stderr] 57 |     RngFail,
[INFO] [stderr]    |     ^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `CrossoverError` has a derived impl for the trait `Debug`, but this is intentionally ignored during dead code analysis
[INFO] [stderr] 
[INFO] [stderr] warning: variants `HeterogenousData` and `InvalidPercentage` are never constructed
[INFO] [stderr]   --> src/dataset.rs:63:5
[INFO] [stderr]    |
[INFO] [stderr] 61 | pub enum DataSetError {
[INFO] [stderr]    |          ------------ variants in this enum
[INFO] [stderr] 62 |     #[error("found different kinds of data")]
[INFO] [stderr] 63 |     HeterogenousData,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 69 |     InvalidPercentage,
[INFO] [stderr]    |     ^^^^^^^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `DataSetError` has derived impls for the traits `Debug` and `Clone`, but these are intentionally ignored during dead code analysis
[INFO] [stderr] 
[INFO] [stderr] warning: methods `set_generation` and `candidates_mut` are never used
[INFO] [stderr]   --> src/population.rs:31:12
[INFO] [stderr]    |
[INFO] [stderr] 22 | impl Population {
[INFO] [stderr]    | --------------- methods in this implementation
[INFO] [stderr] ...
[INFO] [stderr] 31 |     pub fn set_generation(&mut self, new_generation: usize) {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^
[INFO] [stderr] ...
[INFO] [stderr] 39 |     pub fn candidates_mut(&mut self) -> &mut HashSet<Candidate> {
[INFO] [stderr]    |            ^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing
[INFO] [stderr]   --> src/population.rs:71:9
[INFO] [stderr]    |
[INFO] [stderr] 71 |         &self,
[INFO] [stderr]    |         ^^^^^ the lifetime is elided here
[INFO] [stderr] 72 |         data_set: &'_ DataSet,
[INFO] [stderr] 73 |     ) -> Result<Vec<CandidateFitness>, FitnessCalculationError> {
[INFO] [stderr]    |                     ^^^^^^^^^^^^^^^^ the same lifetime is hidden here
[INFO] [stderr]    |
[INFO] [stderr]    = help: the same lifetime is referred to in inconsistent ways, making the signature confusing
[INFO] [stderr]    = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default
[INFO] [stderr] help: use `'_` for type paths
[INFO] [stderr]    |
[INFO] [stderr] 73 |     ) -> Result<Vec<CandidateFitness<'_>>, FitnessCalculationError> {
[INFO] [stderr]    |                                     ++++
[INFO] [stderr] 
[INFO] [stderr] warning: `biocomputation` (bin "biocomputation" test) generated 23 warnings (run `cargo fix --bin "biocomputation" --tests` to apply 13 suggestions)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/biocomputation-05a30ccd8707d9a8)
[INFO] [stdout] 
[INFO] [stdout] running 6 tests
[INFO] [stdout] test dataitem::test::test_one_ignored ... ok
[INFO] [stdout] test dataitem::test::test_non_digit ... ok
[INFO] [stdout] test dataitem::test::test_num_digits_width ... ok
[INFO] [stdout] test dataitem::test::test_binary ... ok
[INFO] [stdout] test dataitem::test::test_non_ascii ... ok
[INFO] [stdout] test dataitem::test::test_char_at ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- dataitem::test::test_char_at stdout ----
[INFO] [stdout] 
[INFO] [stdout] thread 'dataitem::test::test_char_at' (18) panicked at src/dataitem.rs:172:9:
[INFO] [stdout] assertion `left == right` failed
[INFO] [stdout]   left: Some('1')
[INFO] [stdout]  right: Some('9')
[INFO] [stdout] stack backtrace:
[INFO] [stdout]    0:     0x5fb02a7ef352 - std::backtrace_rs::backtrace::libunwind::trace::hcab59e1e990fdc24
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stdout]    1:     0x5fb02a7ef352 - std::backtrace_rs::backtrace::trace_unsynchronized::he24cc57f3d2f47b7
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stdout]    2:     0x5fb02a7ef352 - std::sys::backtrace::_print_fmt::hf8d65ede198eeb54
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:66:9
[INFO] [stdout]    3:     0x5fb02a7ef352 - <std::sys::backtrace::BacktraceLock::print::DisplayBacktrace as core::fmt::Display>::fmt::h67edf0e4d33c343c
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:39:26
[INFO] [stdout]    4:     0x5fb02a80017f - core::fmt::rt::Argument::fmt::hef94184842aeafdd
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/fmt/rt.rs:173:76
[INFO] [stdout]    5:     0x5fb02a80017f - core::fmt::write::hcf0c66b48a8fa606
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/fmt/mod.rs:1468:25
[INFO] [stdout]    6:     0x5fb02a7bc7b1 - std::io::default_write_fmt::h69967ac0ba93195f
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/io/mod.rs:639:11
[INFO] [stdout]    7:     0x5fb02a7bc7b1 - std::io::Write::write_fmt::h8db9396209deaa1c
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/io/mod.rs:1954:13
[INFO] [stdout]    8:     0x5fb02a7c8812 - std::sys::backtrace::BacktraceLock::print::h07e5435aa717b414
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:42:9
[INFO] [stdout]    9:     0x5fb02a7cd3bf - std::panicking::default_hook::{{closure}}::h91001850288db5f7
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:301:27
[INFO] [stdout]   10:     0x5fb02a7cd251 - std::panicking::default_hook::h2346dbb704ef5512
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:325:9
[INFO] [stdout]   11:     0x5fb02a6384fe - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h18383b2e29377420
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/alloc/src/boxed.rs:1999:9
[INFO] [stdout]   12:     0x5fb02a6384fe - test::test_main_with_exit_callback::{{closure}}::h272d7ef99aef06dc
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:145:21
[INFO] [stdout]   13:     0x5fb02a7cda7f - <alloc::boxed::Box<F,A> as core::ops::function::Fn<Args>>::call::h6dba6e441651a0d1
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/alloc/src/boxed.rs:1999:9
[INFO] [stdout]   14:     0x5fb02a7cda7f - std::panicking::panic_with_hook::hd2b063a6090d23a4
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:842:13
[INFO] [stdout]   15:     0x5fb02a7cd8da - std::panicking::panic_handler::{{closure}}::he666d95f139a333e
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:707:13
[INFO] [stdout]   16:     0x5fb02a7c8949 - std::sys::backtrace::__rust_end_short_backtrace::h631ad224854ebee5
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:174:18
[INFO] [stdout]   17:     0x5fb02a7b0c8d - __rustc[1d67440d6e82e4f]::rust_begin_unwind
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:698:5
[INFO] [stdout]   18:     0x5fb02a8098d0 - core::panicking::panic_fmt::h420ddb7fd73daf53
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panicking.rs:75:14
[INFO] [stdout]   19:     0x5fb02a8096d3 - core::panicking::assert_failed_inner::h448e1d534f4c3d4b
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panicking.rs:439:17
[INFO] [stdout]   20:     0x5fb02a632f47 - core::panicking::assert_failed::h50308c85c0bb94af
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panicking.rs:394:5
[INFO] [stdout]   21:     0x5fb02a613252 - biocomputation::dataitem::test::test_char_at::hc2beb80a93b87282
[INFO] [stdout]                                at /opt/rustwide/workdir/src/dataitem.rs:172:9
[INFO] [stdout]   22:     0x5fb02a613337 - biocomputation::dataitem::test::test_char_at::{{closure}}::h25cdf774f5abbf2d
[INFO] [stdout]                                at /opt/rustwide/workdir/src/dataitem.rs:168:22
[INFO] [stdout]   23:     0x5fb02a613f76 - core::ops::function::FnOnce::call_once::h724118500f8a4ca1
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   24:     0x5fb02a6382bb - core::ops::function::FnOnce::call_once::h70887edf07a630ba
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   25:     0x5fb02a6382bb - test::__rust_begin_short_backtrace::h27763c4cbbdb8601
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:663:18
[INFO] [stdout]   26:     0x5fb02a64df25 - test::run_test_in_process::{{closure}}::h4dc8bc6d5e3924d3
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:686:74
[INFO] [stdout]   27:     0x5fb02a64df25 - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::h75905e8ffe81974f
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   28:     0x5fb02a64df25 - std::panicking::catch_unwind::do_call::h0bc60366ba66eba5
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:590:40
[INFO] [stdout]   29:     0x5fb02a64df25 - std::panicking::catch_unwind::hae1ec7bf94407afa
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:553:19
[INFO] [stdout]   30:     0x5fb02a64df25 - std::panic::catch_unwind::h0f4ff4773d84d3cd
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panic.rs:359:14
[INFO] [stdout]   31:     0x5fb02a64df25 - test::run_test_in_process::h03fbc77ae48b3f10
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:686:27
[INFO] [stdout]   32:     0x5fb02a64df25 - test::run_test::{{closure}}::h83476a9c453dc4d3
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:607:43
[INFO] [stdout]   33:     0x5fb02a624714 - test::run_test::{{closure}}::h515482ad1e7fe7de
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/test/src/lib.rs:637:41
[INFO] [stdout]   34:     0x5fb02a624714 - std::sys::backtrace::__rust_begin_short_backtrace::hed09f6ac5fe9d647
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/backtrace.rs:158:18
[INFO] [stdout]   35:     0x5fb02a627fda - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h988e2cd969319888
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/thread/mod.rs:559:17
[INFO] [stdout]   36:     0x5fb02a627fda - <core::panic::unwind_safe::AssertUnwindSafe<F> as core::ops::function::FnOnce<()>>::call_once::hd70e28dc46ec20be
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/panic/unwind_safe.rs:274:9
[INFO] [stdout]   37:     0x5fb02a627fda - std::panicking::catch_unwind::do_call::hdc29e11311eb7655
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:590:40
[INFO] [stdout]   38:     0x5fb02a627fda - std::panicking::catch_unwind::h9e402d6a96fef41c
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panicking.rs:553:19
[INFO] [stdout]   39:     0x5fb02a627fda - std::panic::catch_unwind::h9213c0c54aec70e0
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/panic.rs:359:14
[INFO] [stdout]   40:     0x5fb02a627fda - std::thread::Builder::spawn_unchecked_::{{closure}}::h6262965869ed2b87
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/thread/mod.rs:557:30
[INFO] [stdout]   41:     0x5fb02a627fda - core::ops::function::FnOnce::call_once{{vtable.shim}}::h05c05ed02619e462
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/core/src/ops/function.rs:250:5
[INFO] [stdout]   42:     0x5fb02a7c3aaf - <alloc::boxed::Box<F,A> as core::ops::function::FnOnce<Args>>::call_once::h2044e71c41d3958a
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/alloc/src/boxed.rs:1985:9
[INFO] [stdout]   43:     0x5fb02a7c3aaf - std::sys::thread::unix::Thread::new::thread_start::hf277835320aa8e5a
[INFO] [stdout]                                at /rustc/bb624dcb4c8ab987e10c0808d92d76f3b84dd117/library/std/src/sys/thread/unix.rs:126:17
[INFO] [stdout]   44:     0x7cd017b42aa4 - <unknown>
[INFO] [stdout]   45:     0x7cd017bcfa34 - clone
[INFO] [stdout]   46:                0x0 - <unknown>
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     dataitem::test::test_char_at
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 5 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.08s
[INFO] [stdout] 
[INFO] [stderr] error: test failed, to rerun pass `--bin biocomputation`
[INFO] running `Command { std: "docker" "inspect" "821ded00a281e9af252a84fb07e20a9d9c36fd7cbe11700221adb1b848764bcb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "821ded00a281e9af252a84fb07e20a9d9c36fd7cbe11700221adb1b848764bcb", kill_on_drop: false }`
[INFO] [stdout] 821ded00a281e9af252a84fb07e20a9d9c36fd7cbe11700221adb1b848764bcb
