[INFO] cloning repository https://github.com/illumination-k/sequence-manager
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/illumination-k/sequence-manager" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fillumination-k%2Fsequence-manager", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fillumination-k%2Fsequence-manager'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 054c8967dcb36b356ea43f4a72854ffb3510f0af
[INFO] testing illumination-k/sequence-manager against 1.90.0 for beta-1.91-2
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fillumination-k%2Fsequence-manager" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/illumination-k/sequence-manager
[INFO] finished tweaking git repo https://github.com/illumination-k/sequence-manager
[INFO] tweaked toml for git repo https://github.com/illumination-k/sequence-manager written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/illumination-k/sequence-manager on toolchain 1.90.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/illumination-k/sequence-manager already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.90.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded is-terminal v0.4.3
[INFO] [stderr]   Downloaded futures-io v0.3.26
[INFO] [stderr]   Downloaded filetime v0.2.20
[INFO] [stderr]   Downloaded futures-executor v0.3.26
[INFO] [stderr]   Downloaded spin v0.9.5
[INFO] [stderr]   Downloaded tar v0.4.38
[INFO] [stderr]   Downloaded anyhow v1.0.69
[INFO] [stderr]   Downloaded io-lifetimes v1.0.5
[INFO] [stderr]   Downloaded clap_derive v4.1.0
[INFO] [stderr]   Downloaded ipnet v2.7.1
[INFO] [stderr]   Downloaded reqwest v0.11.14
[INFO] [stderr]   Downloaded clap v4.1.6
[INFO] [stderr]   Downloaded wasm-bindgen-futures v0.4.34
[INFO] [stderr]   Downloaded xattr v0.2.3
[INFO] [stderr]   Downloaded clap_lex v0.3.1
[INFO] [stderr]   Downloaded rustix v0.36.8
[INFO] [stderr]   Downloaded libsqlite3-sys v0.24.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6f6d5358a89e977e22efc540fd7f9ee87c78a0e3c9ff7dca5ebfe73f9f63626b
[INFO] running `Command { std: "docker" "start" "-a" "6f6d5358a89e977e22efc540fd7f9ee87c78a0e3c9ff7dca5ebfe73f9f63626b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6f6d5358a89e977e22efc540fd7f9ee87c78a0e3c9ff7dca5ebfe73f9f63626b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6f6d5358a89e977e22efc540fd7f9ee87c78a0e3c9ff7dca5ebfe73f9f63626b", kill_on_drop: false }`
[INFO] [stdout] 6f6d5358a89e977e22efc540fd7f9ee87c78a0e3c9ff7dca5ebfe73f9f63626b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5d1ff13dafa97d696a5eb219d42c7017986c1ce748e5ccb63610f9bc5fa377fd
[INFO] running `Command { std: "docker" "start" "-a" "5d1ff13dafa97d696a5eb219d42c7017986c1ce748e5ccb63610f9bc5fa377fd", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]    Compiling libc v0.2.139
[INFO] [stderr]    Compiling quote v1.0.23
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[INFO] [stderr]    Compiling byteorder v1.4.3
[INFO] [stderr]    Compiling async-trait v0.1.64
[INFO] [stderr]    Compiling dotenvy v0.15.6
[INFO] [stderr]    Compiling linux-raw-sys v0.1.4
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[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling sqlformat v0.2.1
[INFO] [stderr]    Compiling encoding_rs v0.8.32
[INFO] [stderr]    Compiling base64 v0.21.0
[INFO] [stderr]    Compiling ipnet v2.7.1
[INFO] [stderr]    Compiling os_str_bytes v6.4.1
[INFO] [stderr]    Compiling mime v0.3.16
[INFO] [stderr]    Compiling miniz_oxide v0.6.2
[INFO] [stderr]    Compiling tokio-macros v1.8.2
[INFO] [stderr]    Compiling openssl-macros v0.1.0
[INFO] [stderr]    Compiling pin-project-internal v1.0.12
[INFO] [stderr]    Compiling thiserror-impl v1.0.38
[INFO] [stderr]    Compiling pin-project v1.0.12
[INFO] [stderr]    Compiling flume v0.10.14
[INFO] [stderr]    Compiling is-terminal v0.4.3
[INFO] [stderr]    Compiling clap_derive v4.1.0
[INFO] [stderr]    Compiling clap_lex v0.3.1
[INFO] [stderr]    Compiling filetime v0.2.20
[INFO] [stderr]    Compiling xattr v0.2.3
[INFO] [stderr]    Compiling common v0.1.0 (/opt/rustwide/workdir/common)
[INFO] [stderr]    Compiling flate2 v1.0.25
[INFO] [stderr]    Compiling tar v0.4.38
[INFO] [stderr]    Compiling phytozome v0.1.0 (/opt/rustwide/workdir/phytozome)
[INFO] [stderr]    Compiling onekp v0.1.0 (/opt/rustwide/workdir/onekp)
[INFO] [stderr]    Compiling clap v4.1.6
[INFO] [stderr]    Compiling tokio-native-tls v0.3.1
[INFO] [stderr]    Compiling tokio-util v0.7.7
[INFO] [stderr]    Compiling tokio-stream v0.1.11
[INFO] [stderr]    Compiling sqlx-rt v0.6.2
[INFO] [stderr]    Compiling h2 v0.3.15
[INFO] [stderr]    Compiling serde_urlencoded v0.7.1
[INFO] [stderr]    Compiling sqlx-core v0.6.2
[INFO] [stderr]    Compiling hyper v0.14.24
[INFO] [stderr]    Compiling hyper-tls v0.5.0
[INFO] [stderr]    Compiling reqwest v0.11.14
[INFO] [stderr]    Compiling sqlx-macros v0.6.2
[INFO] [stderr]    Compiling sqlx v0.6.2
[INFO] [stderr]    Compiling taxonomy v0.1.0 (/opt/rustwide/workdir/taxonomy)
[INFO] [stdout] warning: associated functions `init` and `new` are never used
[INFO] [stdout]   --> taxonomy/src/lib.rs:34:8
[INFO] [stdout]    |
[INFO] [stdout] 33 | impl TaxonomyRecord {
[INFO] [stdout]    | ------------------- associated functions in this implementation
[INFO] [stdout] 34 |     fn init(id: u32, parent_id: u32, rank: TaxonomyRank) -> Self {
[INFO] [stdout]    |        ^^^^
[INFO] [stdout] ...
[INFO] [stdout] 44 |     fn new(
[INFO] [stdout]    |        ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_nodes` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:117:4
[INFO] [stdout]     |
[INFO] [stdout] 117 | fn read_nodes(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_names` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:195:4
[INFO] [stdout]     |
[INFO] [stdout] 195 | fn read_names(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `downlaod_taxonomy_dump` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:227:4
[INFO] [stdout]     |
[INFO] [stdout] 227 | fn downlaod_taxonomy_dump(path: &Path) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling cli v0.1.0 (/opt/rustwide/workdir/cli)
[INFO] [stdout] warning: unused variable: `gzip`
[INFO] [stdout]   --> cli/src/main.rs:75:63
[INFO] [stdout]    |
[INFO] [stdout] 75 |             Self::URL { source, taxonomy_id: _, name, url: _, gzip, version } => {
[INFO] [stdout]    |                                                               ^^^^ help: try ignoring the field: `gzip: _`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `SequenceType` is never used
[INFO] [stdout]  --> cli/src/main.rs:5:6
[INFO] [stdout]   |
[INFO] [stdout] 5 | enum SequenceType {
[INFO] [stdout]   |      ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `Source` is never used
[INFO] [stdout]   --> cli/src/main.rs:20:6
[INFO] [stdout]    |
[INFO] [stdout] 20 | enum Source {
[INFO] [stdout]    |      ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `LockObject` is never used
[INFO] [stdout]   --> cli/src/main.rs:37:6
[INFO] [stdout]    |
[INFO] [stdout] 37 | enum LockObject {
[INFO] [stdout]    |      ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `to_url` and `to_path` are never used
[INFO] [stdout]   --> cli/src/main.rs:61:8
[INFO] [stdout]    |
[INFO] [stdout] 60 | impl LockObject {
[INFO] [stdout]    | --------------- methods in this implementation
[INFO] [stdout] 61 |     fn to_url(&self) {}
[INFO] [stdout]    |        ^^^^^^
[INFO] [stdout] 62 |     fn to_path(&self, mut root: PathBuf, sequence_type: SequenceType) -> PathBuf {
[INFO] [stdout]    |        ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 00s
[INFO] running `Command { std: "docker" "inspect" "5d1ff13dafa97d696a5eb219d42c7017986c1ce748e5ccb63610f9bc5fa377fd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5d1ff13dafa97d696a5eb219d42c7017986c1ce748e5ccb63610f9bc5fa377fd", kill_on_drop: false }`
[INFO] [stdout] 5d1ff13dafa97d696a5eb219d42c7017986c1ce748e5ccb63610f9bc5fa377fd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a1e922a62d64620819832ebfa79255d1d7d67a7707dcca8050cd814577e90c0e
[INFO] running `Command { std: "docker" "start" "-a" "a1e922a62d64620819832ebfa79255d1d7d67a7707dcca8050cd814577e90c0e", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stdout] warning: associated functions `init` and `new` are never used
[INFO] [stdout]   --> taxonomy/src/lib.rs:34:8
[INFO] [stdout]    |
[INFO] [stdout] 33 | impl TaxonomyRecord {
[INFO] [stdout]    | ------------------- associated functions in this implementation
[INFO] [stdout] 34 |     fn init(id: u32, parent_id: u32, rank: TaxonomyRank) -> Self {
[INFO] [stdout]    |        ^^^^
[INFO] [stdout] ...
[INFO] [stdout] 44 |     fn new(
[INFO] [stdout]    |        ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_nodes` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:117:4
[INFO] [stdout]     |
[INFO] [stdout] 117 | fn read_nodes(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `read_names` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:195:4
[INFO] [stdout]     |
[INFO] [stdout] 195 | fn read_names(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: function `downlaod_taxonomy_dump` is never used
[INFO] [stdout]    --> taxonomy/src/lib.rs:227:4
[INFO] [stdout]     |
[INFO] [stdout] 227 | fn downlaod_taxonomy_dump(path: &Path) -> Result<()> {
[INFO] [stdout]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]    Compiling taxonomy v0.1.0 (/opt/rustwide/workdir/taxonomy)
[INFO] [stderr]    Compiling common v0.1.0 (/opt/rustwide/workdir/common)
[INFO] [stderr]    Compiling phytozome v0.1.0 (/opt/rustwide/workdir/phytozome)
[INFO] [stderr]    Compiling onekp v0.1.0 (/opt/rustwide/workdir/onekp)
[INFO] [stderr]    Compiling cli v0.1.0 (/opt/rustwide/workdir/cli)
[INFO] [stdout] warning: unused variable: `gzip`
[INFO] [stdout]   --> cli/src/main.rs:75:63
[INFO] [stdout]    |
[INFO] [stdout] 75 |             Self::URL { source, taxonomy_id: _, name, url: _, gzip, version } => {
[INFO] [stdout]    |                                                               ^^^^ help: try ignoring the field: `gzip: _`
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `SequenceType` is never used
[INFO] [stdout]  --> cli/src/main.rs:5:6
[INFO] [stdout]   |
[INFO] [stdout] 5 | enum SequenceType {
[INFO] [stdout]   |      ^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `Source` is never used
[INFO] [stdout]   --> cli/src/main.rs:20:6
[INFO] [stdout]    |
[INFO] [stdout] 20 | enum Source {
[INFO] [stdout]    |      ^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: enum `LockObject` is never used
[INFO] [stdout]   --> cli/src/main.rs:37:6
[INFO] [stdout]    |
[INFO] [stdout] 37 | enum LockObject {
[INFO] [stdout]    |      ^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: methods `to_url` and `to_path` are never used
[INFO] [stdout]   --> cli/src/main.rs:61:8
[INFO] [stdout]    |
[INFO] [stdout] 60 | impl LockObject {
[INFO] [stdout]    | --------------- methods in this implementation
[INFO] [stdout] 61 |     fn to_url(&self) {}
[INFO] [stdout]    |        ^^^^^^
[INFO] [stdout] 62 |     fn to_path(&self, mut root: PathBuf, sequence_type: SequenceType) -> PathBuf {
[INFO] [stdout]    |        ^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused variable: `recs`
[INFO] [stdout]    --> taxonomy/src/lib.rs:246:13
[INFO] [stdout]     |
[INFO] [stdout] 246 |         let recs = _load_taxonomy_from_dump(
[INFO] [stdout]     |             ^^^^ help: if this is intentional, prefix it with an underscore: `_recs`
[INFO] [stdout]     |
[INFO] [stdout]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: associated function `new` is never used
[INFO] [stdout]   --> taxonomy/src/lib.rs:44:8
[INFO] [stdout]    |
[INFO] [stdout] 33 | impl TaxonomyRecord {
[INFO] [stdout]    | ------------------- associated function in this implementation
[INFO] [stdout] ...
[INFO] [stdout] 44 |     fn new(
[INFO] [stdout]    |        ^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(dead_code)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 3.54s
[INFO] running `Command { std: "docker" "inspect" "a1e922a62d64620819832ebfa79255d1d7d67a7707dcca8050cd814577e90c0e", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a1e922a62d64620819832ebfa79255d1d7d67a7707dcca8050cd814577e90c0e", kill_on_drop: false }`
[INFO] [stdout] a1e922a62d64620819832ebfa79255d1d7d67a7707dcca8050cd814577e90c0e
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+1.90.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 7f0bd836b2023d6d8e8171fde408ffaf573d4b9ef0507179b440036c2db4d16f
[INFO] running `Command { std: "docker" "start" "-a" "7f0bd836b2023d6d8e8171fde408ffaf573d4b9ef0507179b440036c2db4d16f", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr] warning: associated functions `init` and `new` are never used
[INFO] [stderr]   --> taxonomy/src/lib.rs:34:8
[INFO] [stderr]    |
[INFO] [stderr] 33 | impl TaxonomyRecord {
[INFO] [stderr]    | ------------------- associated functions in this implementation
[INFO] [stderr] 34 |     fn init(id: u32, parent_id: u32, rank: TaxonomyRank) -> Self {
[INFO] [stderr]    |        ^^^^
[INFO] [stderr] ...
[INFO] [stderr] 44 |     fn new(
[INFO] [stderr]    |        ^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: function `read_nodes` is never used
[INFO] [stderr]    --> taxonomy/src/lib.rs:117:4
[INFO] [stderr]     |
[INFO] [stderr] 117 | fn read_nodes(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stderr]     |    ^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `read_names` is never used
[INFO] [stderr]    --> taxonomy/src/lib.rs:195:4
[INFO] [stderr]     |
[INFO] [stderr] 195 | fn read_names(path: &Path, recs: &mut HashMap<u32, TaxonomyRecord>) -> Result<()> {
[INFO] [stderr]     |    ^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: function `downlaod_taxonomy_dump` is never used
[INFO] [stderr]    --> taxonomy/src/lib.rs:227:4
[INFO] [stderr]     |
[INFO] [stderr] 227 | fn downlaod_taxonomy_dump(path: &Path) -> Result<()> {
[INFO] [stderr]     |    ^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: unused variable: `recs`
[INFO] [stderr]    --> taxonomy/src/lib.rs:246:13
[INFO] [stderr]     |
[INFO] [stderr] 246 |         let recs = _load_taxonomy_from_dump(
[INFO] [stderr]     |             ^^^^ help: if this is intentional, prefix it with an underscore: `_recs`
[INFO] [stderr]     |
[INFO] [stderr]     = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: associated function `new` is never used
[INFO] [stderr]   --> taxonomy/src/lib.rs:44:8
[INFO] [stderr]    |
[INFO] [stderr] 33 | impl TaxonomyRecord {
[INFO] [stderr]    | ------------------- associated function in this implementation
[INFO] [stderr] ...
[INFO] [stderr] 44 |     fn new(
[INFO] [stderr]    |        ^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `taxonomy` (lib) generated 4 warnings
[INFO] [stderr] warning: `taxonomy` (lib test) generated 2 warnings
[INFO] [stderr] warning: unused variable: `gzip`
[INFO] [stderr]   --> cli/src/main.rs:75:63
[INFO] [stderr]    |
[INFO] [stderr] 75 |             Self::URL { source, taxonomy_id: _, name, url: _, gzip, version } => {
[INFO] [stderr]    |                                                               ^^^^ help: try ignoring the field: `gzip: _`
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(unused_variables)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: enum `SequenceType` is never used
[INFO] [stderr]  --> cli/src/main.rs:5:6
[INFO] [stderr]   |
[INFO] [stderr] 5 | enum SequenceType {
[INFO] [stderr]   |      ^^^^^^^^^^^^
[INFO] [stderr]   |
[INFO] [stderr]   = note: `#[warn(dead_code)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: enum `Source` is never used
[INFO] [stderr]   --> cli/src/main.rs:20:6
[INFO] [stderr]    |
[INFO] [stderr] 20 | enum Source {
[INFO] [stderr]    |      ^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: enum `LockObject` is never used
[INFO] [stderr]   --> cli/src/main.rs:37:6
[INFO] [stderr]    |
[INFO] [stderr] 37 | enum LockObject {
[INFO] [stderr]    |      ^^^^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: methods `to_url` and `to_path` are never used
[INFO] [stderr]   --> cli/src/main.rs:61:8
[INFO] [stderr]    |
[INFO] [stderr] 60 | impl LockObject {
[INFO] [stderr]    | --------------- methods in this implementation
[INFO] [stderr] 61 |     fn to_url(&self) {}
[INFO] [stderr]    |        ^^^^^^
[INFO] [stderr] 62 |     fn to_path(&self, mut root: PathBuf, sequence_type: SequenceType) -> PathBuf {
[INFO] [stderr]    |        ^^^^^^^
[INFO] [stderr] 
[INFO] [stderr] warning: `cli` (bin "cli" test) generated 5 warnings
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.36s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/cli-11a6735d0ee13a10)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/common-a4a5d424cd669d9a)
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/onekp-434c6565773b3fd5)
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test tests::it_works ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/phytozome-e3a0a81bf571c863)
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/taxonomy-7188d3cbadc51e6e)
[INFO] [stdout] test tests::it_works ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test sql::test_sql::test_create_table ... FAILED
[INFO] [stdout] test test_taxonomy::test_download_and_load ... FAILED
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout] 
[INFO] [stdout] ---- sql::test_sql::test_create_table stdout ----
[INFO] [stdout] Error: environment variable not found
[INFO] [stdout] 
[INFO] [stdout] ---- test_taxonomy::test_download_and_load stdout ----
[INFO] [stdout] Error: error sending request for url (https://ftp.ncbi.nlm.nih.gov/pub/taxonomy/taxdump.tar.gz): error trying to connect: dns error: failed to lookup address information: Temporary failure in name resolution
[INFO] [stdout] 
[INFO] [stdout] Caused by:
[INFO] [stdout]     0: error trying to connect: dns error: failed to lookup address information: Temporary failure in name resolution
[INFO] [stdout]     1: dns error: failed to lookup address information: Temporary failure in name resolution
[INFO] [stdout]     2: failed to lookup address information: Temporary failure in name resolution
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] failures:
[INFO] [stdout]     sql::test_sql::test_create_table
[INFO] [stdout]     test_taxonomy::test_download_and_load
[INFO] [stdout] 
[INFO] [stdout] test result: FAILED. 0 passed; 2 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.12s
[INFO] [stderr] error: test failed, to rerun pass `-p taxonomy --lib`
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "7f0bd836b2023d6d8e8171fde408ffaf573d4b9ef0507179b440036c2db4d16f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7f0bd836b2023d6d8e8171fde408ffaf573d4b9ef0507179b440036c2db4d16f", kill_on_drop: false }`
[INFO] [stdout] 7f0bd836b2023d6d8e8171fde408ffaf573d4b9ef0507179b440036c2db4d16f
