[INFO] fetching crate rustybam 0.1.33... [INFO] testing rustybam-0.1.33 against 1.86.0 for beta-1.87-1 [INFO] extracting crate rustybam 0.1.33 into /workspace/builds/worker-6-tc1/source [INFO] validating manifest of crates.io crate rustybam 0.1.33 on toolchain 1.86.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.86.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] removed /workspace/builds/worker-6-tc1/source/.cargo/config [INFO] started tweaking crates.io crate rustybam 0.1.33 [INFO] finished tweaking crates.io crate rustybam 0.1.33 [INFO] tweaked toml for crates.io crate rustybam 0.1.33 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] crate crates.io crate rustybam 0.1.33 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.86.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: file `/workspace/builds/worker-6-tc1/source/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded core_affinity v0.8.0 [INFO] [stderr] Downloaded calmio_filters v0.1.0 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded buffer-redux v1.0.0 [INFO] [stderr] Downloaded calm_io v0.1.1 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded clap_complete v3.2.5 [INFO] [stderr] Downloaded libdeflater v0.12.0 [INFO] [stderr] Downloaded gzp v0.11.3 [INFO] [stderr] Downloaded openssl-src v111.26.0+1.1.1u [INFO] [stderr] Downloaded hts-sys v2.1.1 [INFO] [stderr] Downloaded rust-htslib v0.44.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1633b91f6761bcae8fe190ec2d9337f28cd35fd65f0a88657e0770a735447a3f [INFO] running `Command { std: "docker" "start" "-a" "1633b91f6761bcae8fe190ec2d9337f28cd35fd65f0a88657e0770a735447a3f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1633b91f6761bcae8fe190ec2d9337f28cd35fd65f0a88657e0770a735447a3f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1633b91f6761bcae8fe190ec2d9337f28cd35fd65f0a88657e0770a735447a3f", kill_on_drop: false }` [INFO] [stdout] 1633b91f6761bcae8fe190ec2d9337f28cd35fd65f0a88657e0770a735447a3f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ca53db18bad0491c7831ba7c661fcfc5f257540d5b166c4ec03b3ba3783d56c2 [INFO] running `Command { std: "docker" "start" "-a" "ca53db18bad0491c7831ba7c661fcfc5f257540d5b166c4ec03b3ba3783d56c2", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling libc v0.2.147 [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Compiling proc-macro2 v1.0.63 [INFO] [stderr] Compiling quote v1.0.29 [INFO] [stderr] Compiling unicode-ident v1.0.9 [INFO] [stderr] Compiling pkg-config v0.3.27 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling libm v0.2.7 [INFO] [stderr] Compiling memchr v2.5.0 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling scopeguard v1.1.0 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling crossbeam-utils v0.8.16 [INFO] [stderr] Compiling rustversion v1.0.12 [INFO] [stderr] Compiling serde v1.0.164 [INFO] [stderr] Compiling paste v1.0.12 [INFO] [stderr] Compiling termcolor v1.2.0 [INFO] [stderr] Compiling thiserror v1.0.40 [INFO] [stderr] Compiling bytemuck v1.13.1 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling num-integer v0.1.45 [INFO] [stderr] Compiling matrixmultiply v0.3.7 [INFO] [stderr] Compiling memoffset v0.9.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling aho-corasick v1.0.2 [INFO] [stderr] Compiling crossbeam-epoch v0.9.15 [INFO] [stderr] Compiling num-rational v0.4.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling lock_api v0.4.10 [INFO] [stderr] Compiling safe_arch v0.7.0 [INFO] [stderr] Compiling typenum v1.16.0 [INFO] [stderr] Compiling os_str_bytes v6.5.1 [INFO] [stderr] Compiling tinyvec_macros v0.1.1 [INFO] [stderr] Compiling crc32fast v1.3.2 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling regex-syntax v0.7.2 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling syn v2.0.22 [INFO] [stderr] Compiling tinyvec v1.6.0 [INFO] [stderr] Compiling wide v0.7.10 [INFO] [stderr] Compiling once_cell v1.18.0 [INFO] [stderr] Compiling textwrap v0.16.0 [INFO] [stderr] Compiling jobserver v0.1.26 [INFO] [stderr] Compiling getrandom v0.2.10 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling cc v1.0.79 [INFO] [stderr] Compiling futures-core v0.3.28 [INFO] [stderr] Compiling num-complex v0.4.3 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling byteorder v1.4.3 [INFO] [stderr] Compiling either v1.8.1 [INFO] [stderr] Compiling log v0.4.19 [INFO] [stderr] Compiling adler v1.0.2 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling strsim v0.10.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling miniz_oxide v0.7.1 [INFO] [stderr] Compiling unicode-normalization v0.1.22 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Compiling openssl-src v111.26.0+1.1.1u [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling rayon-core v1.11.0 [INFO] [stderr] Compiling anyhow v1.0.71 [INFO] [stderr] Compiling snap v1.1.0 [INFO] [stderr] Compiling percent-encoding v2.3.0 [INFO] [stderr] Compiling unicode-bidi v0.3.13 [INFO] [stderr] Compiling form_urlencoded v1.2.0 [INFO] [stderr] Compiling crossbeam-deque v0.8.3 [INFO] [stderr] Compiling spin v0.9.8 [INFO] [stderr] Compiling nanorand v0.7.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.8 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling futures-sink v0.3.28 [INFO] [stderr] Compiling ryu v1.0.13 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling safemem v0.3.3 [INFO] [stderr] Compiling regex v1.8.4 [INFO] [stderr] Compiling libz-sys v1.1.9 [INFO] [stderr] Compiling openssl-sys v0.9.90 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.63+curl-8.1.2 [INFO] [stderr] Compiling libdeflate-sys v0.12.0 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling hts-sys v2.1.1 [INFO] [stderr] Compiling idna v0.4.0 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling itoa v1.0.6 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling bytecount v0.6.3 [INFO] [stderr] Compiling petgraph v0.6.3 [INFO] [stderr] Compiling buffer-redux v1.0.0 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling url v2.4.0 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling env_logger v0.9.3 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling ordered-float v3.7.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling core_affinity v0.8.0 [INFO] [stderr] Compiling time v0.1.45 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling iana-time-zone v0.1.57 [INFO] [stderr] Compiling bytes v1.4.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling chrono v0.4.26 [INFO] [stderr] Compiling rayon v1.7.0 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling colored v2.0.0 [INFO] [stderr] Compiling natord v1.0.9 [INFO] [stderr] Compiling bimap v0.6.3 [INFO] [stderr] Compiling clap_derive v3.2.25 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling serde_derive v1.0.164 [INFO] [stderr] Compiling thiserror-impl v1.0.40 [INFO] [stderr] Compiling pin-project-internal v1.1.2 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling enum-map-derive v0.6.0 [INFO] [stderr] Compiling strum_macros v0.25.0 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling calmio_filters v0.1.0 [INFO] [stderr] Compiling getset v0.1.2 [INFO] [stderr] Compiling enum-map v1.1.1 [INFO] [stderr] Compiling calm_io v0.1.1 [INFO] [stderr] Compiling libdeflater v0.12.0 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling bio-types v1.0.0 [INFO] [stderr] Compiling pin-project v1.1.2 [INFO] [stderr] Compiling flume v0.10.14 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling clap_complete v3.2.5 [INFO] [stderr] Compiling flate2 v1.0.26 [INFO] [stderr] Compiling gzp v0.11.3 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling rustybam v0.1.33 (/opt/rustwide/workdir) [INFO] [stderr] Compiling multimap v0.8.3 [INFO] [stderr] Compiling csv v1.2.2 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling statrs v0.16.0 [INFO] [stderr] Compiling bio v1.3.1 [INFO] [stderr] Compiling rust-htslib v0.44.1 [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 22s [INFO] running `Command { std: "docker" "inspect" "ca53db18bad0491c7831ba7c661fcfc5f257540d5b166c4ec03b3ba3783d56c2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ca53db18bad0491c7831ba7c661fcfc5f257540d5b166c4ec03b3ba3783d56c2", kill_on_drop: false }` [INFO] [stdout] ca53db18bad0491c7831ba7c661fcfc5f257540d5b166c4ec03b3ba3783d56c2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ab0192bc5aaa60dec5a2e05ef4cb0869575593ff974dcf8515712ab2fa56e8f0 [INFO] running `Command { std: "docker" "start" "-a" "ab0192bc5aaa60dec5a2e05ef4cb0869575593ff974dcf8515712ab2fa56e8f0", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Compiling rustybam v0.1.33 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 6.24s [INFO] running `Command { std: "docker" "inspect" "ab0192bc5aaa60dec5a2e05ef4cb0869575593ff974dcf8515712ab2fa56e8f0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ab0192bc5aaa60dec5a2e05ef4cb0869575593ff974dcf8515712ab2fa56e8f0", kill_on_drop: false }` [INFO] [stdout] ab0192bc5aaa60dec5a2e05ef4cb0869575593ff974dcf8515712ab2fa56e8f0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] f4367d6ef9152511ca9825d557eb9e4bf9c21a9603dddec3535846d883f24e95 [INFO] running `Command { std: "docker" "start" "-a" "f4367d6ef9152511ca9825d557eb9e4bf9c21a9603dddec3535846d883f24e95", kill_on_drop: false }` [INFO] [stderr] warning: file `/opt/rustwide/workdir/src/main.rs` found to be present in multiple build targets: [INFO] [stderr] * `bin` target `rb` [INFO] [stderr] * `bin` target `rustybam` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.22s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rustybam-85e956bca1ae20d0) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test annotate::tests::test_chrom_specific_overlaps ... ok [INFO] [stdout] test bamstats::tests::test_add_cigar_stats ... ok [INFO] [stdout] test liftover::tests::check_invertible ... ok [INFO] [stdout] test suns::tests::test_convert ... ok [INFO] [stdout] test suns::tests::test_sun_finding ... ok [INFO] [stdout] test liftover::tests::test_aln_pair_liftover ... ok [INFO] [stdout] test trim_overlap::tests::test_inversion_trimming ... ok [INFO] [stdout] test bamstats::tests::test_cigar_stats_from_test_file ... ok [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/rb-91c7bc1bfeb05cfc) [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.10s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/rustybam-f14990ddc5d0e797) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests rustybam [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test src/bed.rs - bed::split_region (line 196) ... FAILED [INFO] [stdout] test src/bed.rs - bed::parse_bed (line 165) ... FAILED [INFO] [stdout] test src/liftover.rs - liftover::break_paf_on_indels (line 170) ... FAILED [INFO] [stdout] test src/bed.rs - bed::has_overlap (line 49) ... FAILED [INFO] [stdout] test src/nucfreq.rs - nucfreq::nucfreq (line 41) ... FAILED [INFO] [stdout] test src/paf.rs - paf::PafRecord::get_target_as_region (line 471) ... FAILED [INFO] [stdout] test src/bed.rs - bed::parse_bed_rec (line 129) ... FAILED [INFO] [stdout] test src/fastx.rs - fastx::run_split_fastx (line 5) ... FAILED [INFO] [stdout] test src/paf.rs - paf::PafRecord::to_sam_string (line 862) ... FAILED [INFO] [stdout] test src/paf.rs - paf::Paf::sam_header (line 310) ... FAILED [INFO] [stdout] test src/nucfreq.rs - nucfreq::region_nucfreq (line 99) ... FAILED [INFO] [stdout] test src/myio.rs - myio::reader (line 38) ... FAILED [INFO] [stdout] test src/paf.rs - paf::Paf::from_file (line 55) ... FAILED [INFO] [stdout] test src/getfasta.rs - getfasta::get_fasta (line 12) ... FAILED [INFO] [stdout] test src/bed.rs - bed::parse_region (line 89) ... FAILED [INFO] [stdout] test src/paf.rs - paf::PafRecord::new (line 373) ... FAILED [INFO] [stdout] test src/paf.rs - paf::cigar_from_str (line 1001) ... FAILED [INFO] [stdout] test src/suns.rs - suns::Genome::get_longest_perfect_repeats (line 85) ... FAILED [INFO] [stdout] test src/paf.rs - paf::consumes_query (line 954) ... FAILED [INFO] [stdout] test src/paf.rs - paf::cs_to_cigar (line 1104) ... FAILED [INFO] [stdout] test src/suns.rs - suns::Genome::from_file (line 50) ... FAILED [INFO] [stdout] test src/paf.rs - paf::is_match (line 967) ... FAILED [INFO] [stdout] test src/trim_overlap.rs - trim_overlap::trim_overlapping_pafs (line 22) ... FAILED [INFO] [stdout] test src/suns.rs - suns::Genome::get_shortest_subseq_size (line 62) ... ok [INFO] [stdout] test src/paf.rs - paf::update_cigar_opt_len (line 979) ... ok [INFO] [stdout] test src/suns.rs - suns::Genome::convert_from_idx (line 144) ... ok [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/bed.rs - bed::split_region (line 196) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcgL15Yk/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestxTQbCr/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/bed.rs - bed::parse_bed (line 165) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcYpMc1o/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestxpKR72/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/liftover.rs - liftover::break_paf_on_indels (line 170) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcpskTWi/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestJ4dgAf/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/bed.rs - bed::has_overlap (line 49) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcck1Vob/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestBeOf1o/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/nucfreq.rs - nucfreq::nucfreq (line 41) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustc8LrZd3/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestIJwN6j/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::PafRecord::get_target_as_region (line 471) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcrRK4Oi/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestMedSLK/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/bed.rs - bed::parse_bed_rec (line 129) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcpbuG6v/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestsALDcA/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/fastx.rs - fastx::run_split_fastx (line 5) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcT0pOSL/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest0sfGaB/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::PafRecord::to_sam_string (line 862) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustc5cRhJ1/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestRQlPOy/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::Paf::sam_header (line 310) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustc6QzvoR/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest6lHLxx/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/nucfreq.rs - nucfreq::region_nucfreq (line 99) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcfSzI76/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestP2nUsn/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/myio.rs - myio::reader (line 38) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcF51Rbc/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestpl6O5y/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::Paf::from_file (line 55) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcurAj6B/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestyroks3/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/getfasta.rs - getfasta::get_fasta (line 12) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcEId2XI/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestueCetG/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/bed.rs - bed::parse_region (line 89) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcS7E4Rz/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestKnSUKu/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::PafRecord::new (line 373) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustc1bkGBR/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestRyCObO/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::cigar_from_str (line 1001) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcECDFGI/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestjsw2AH/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/suns.rs - suns::Genome::get_longest_perfect_repeats (line 85) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcYAXKy1/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestMAP7rv/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::consumes_query (line 954) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcwhljvL/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctesta1B0QS/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::cs_to_cigar (line 1104) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcjYAElg/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestcOVT8k/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/suns.rs - suns::Genome::from_file (line 50) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcdlFXUV/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestZZw95P/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/paf.rs - paf::is_match (line 967) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcadFTCb/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctestxLE7Hc/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/trim_overlap.rs - trim_overlap::trim_overlapping_pafs (line 22) stdout ---- [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcEutYWq/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{librustybam-923406aa2c06f586.rlib,liblog-02cc21b82a7854b6.rlib,libnatord-66e1cad4342b86d2.rlib,libgzp-162d85a608fc0844.rlib,libcore_affinity-f55326411fc77bbc.rlib,liblibdeflater-6a3077b2f321bc0f.rlib,liblibdeflate_sys-fd832a714dc26454.rlib,libsnap-9fb1a977d1c7fab5.rlib,libflume-da229a13d2e68ea7.rlib,libspin-8caa1d738a7146c3.rlib,liblock_api-aaefa738affb6255.rlib,libpin_project-817b42798250e5f3.rlib,libfutures_sink-075528d3d4785b80.rlib,libfutures_core-caade49fc9905a2c.rlib,libnanorand-b9fa4bbcf15bec8f.rlib,libbytes-a8981e430bd8ac4d.rlib,librayon-3b780a50bc3a6336.rlib,librayon_core-e40fd3305343d6bd.rlib,libnum_cpus-9b38b946e6ac5603.rlib,libcrossbeam_deque-48e81e1031265981.rlib,libcrossbeam_epoch-f6081338caceab4c.rlib,libmemoffset-b89be3bc66da9963.rlib,libscopeguard-7106c1688341b40d.rlib,libcrossbeam_channel-745e5fa6c604cc5d.rlib,libcrossbeam_utils-006835d2e46a4922.rlib,libneedletail-7ac573fd535e1de4.rlib,libbuffer_redux-fa06fcbf352c8a2b.rlib,libsafemem-211b89abae95daa3.rlib,libxz2-7341177737a4969a.rlib,libflate2-f100c6dcf947966a.rlib,libcrc32fast-6e81018eda4e113d.rlib,libbzip2-bfdc18a7b35e3ae4.rlib,libclap-e1526e12c7957be6.rlib,libstrsim-86ce3cf7e8ecb62a.rlib,libtermcolor-5044fdbe45211e78.rlib,libtextwrap-e85db9c1df068e2f.rlib,libclap_lex-2d2fca8941b0d43d.rlib,libos_str_bytes-e55337b7be059f03.rlib,libbitflags-817ea04a92d50a33.rlib,libonce_cell-eef611da029be526.rlib,librust_htslib-4b7819e3267082bb.rlib,libieee754-613cee5852d31626.rlib,libhts_sys-37fcbad76dac2c1d.rlib,liblzma_sys-d3b0e52ada90e24e.rlib,libcurl_sys-d93096a661d8c383.rlib,libopenssl_sys-764a84031cb90350.rlib,liblibz_sys-a2fd263164f9cbe6.rlib,libbzip2_sys-4c7bc8eedcd53706.rlib,liburl-a41c3ace83fe81fa.rlib,libidna-e275bb25314c6cbc.rlib,libunicode_normalization-58ea4cae0b1f56d1.rlib,libtinyvec-61caed6efef58738.rlib,libtinyvec_macros-55d8a264b763c0a6.rlib,libunicode_bidi-430cff3331dad5bb.rlib,libform_urlencoded-bbe88c8ad65adfe3.rlib,libpercent_encoding-965c434b02878fae.rlib,liblinear_map-7ba4eea65bc19193.rlib,libcolored-bcc704256661a839.rlib,libatty-6ac6cded585f3fed.rlib,libitertools-a2b37538ee407cd2.rlib,libbio-abc9be23858a5d53.rlib,libstrum-b140215b613aa344.rlib,libcsv-987b0e01cda2477a.rlib,libryu-c4ee967564fd2191.rlib,libitoa-c52f49c4903f4f3a.rlib,libcsv_core-93649f55e7d4be41.rlib,libbytecount-518f8d2946798826.rlib,libtriple_accel-515b86094bdb9f6a.rlib,libeditdistancek-ed2cd9335e795284.rlib,libitertools_num-decb26d752f36362.rlib,libenum_map-940de6133410fc32.rlib,libstatrs-0df0a389526ea156.rlib,libnalgebra-520626ed9445cfa3.rlib,librand_distr-36613a472417192d.rlib,libnum_rational-67b5d73fd3002816.rlib,libtypenum-129a1a1a9a6df1a2.rlib,libsimba-af8516d01175e1a7.rlib,libwide-02929663ab9dfc9b.rlib,libsafe_arch-4bfe67a42a6d8dad.rlib,libbytemuck-8c321fa743222a5e.rlib,librand-fee995170ef3293e.rlib,librand_chacha-61a26f54c0d830eb.rlib,libppv_lite86-5d833bce3f969350.rlib,librand_core-f31a6fb3ce280732.rlib,libgetrandom-2a3ef3f4a329d4b2.rlib,liblibc-4fbdaa5ce9f79af0.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-733f062192a4663d.rlib,libndarray-c5f902b2311be451.rlib,libmatrixmultiply-7bb9504b4b9c8e7e.rlib,libnum_complex-21381c93bb3ed104.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-1684738da092d421.rlib,libitertools-4981b9985f7f6f63.rlib,libeither-a5372fa05a2dccbb.rlib,libanyhow-a5dab202ce210ec2.rlib,libnum_integer-ad588f2c54e041f8.rlib,libbv-9337911253554b3c.rlib,libvec_map-dd5875b4329f7f4b.rlib,libserde-260301471d983c90.rlib,libbit_set-060e79b6ce5fafee.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-ba172359015caba5.rlib,libthiserror-e990c8a4a1f1b166.rlib,libregex-06c125e7526a1659.rlib,libaho_corasick-ff82e2a1a4aa9a0c.rlib,libmemchr-4ae02b283530c1ee.rlib,libregex_syntax-859ee8b4570881c4.rlib,libfxhash-5f9bdd09d79aa46f.rlib,libbyteorder-17848641bf598723.rlib,libpetgraph-dd077aeb51e105c1.rlib,libindexmap-9a10bd9cd6509646.rlib,libhashbrown-e9f13efe30d14b54.rlib,libfixedbitset-e0c502e36b22adaa.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-9af9e93d9a39806a.rlib,libnum_traits-797692d1b9d0f331.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/target/debug/build/bzip2-sys-ef28411c1da7a6cd/out/lib" "-L" "/opt/rustwide/target/debug/build/curl-sys-c5e866eba505525c/out/build" "-L" "/opt/rustwide/target/debug/build/hts-sys-bb78317a0756e1b6/out" "-L" "/opt/rustwide/target/debug/build/libdeflate-sys-69cfb40c71c6e867/out/lib" "-L" "/opt/rustwide/target/debug/build/libz-sys-dba7c365c2cdc8dd/out/lib" "-L" "/opt/rustwide/target/debug/build/lzma-sys-8374107db2c482d9/out" "-L" "/opt/rustwide/target/debug/build/openssl-sys-6c70711ecc4896aa/out/openssl-build/install/lib" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/tmp/rustdoctest0f5AQg/rust_out" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: collect2: fatal error: ld terminated with signal 9 [Killed] [INFO] [stdout] compilation terminated. [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/bed.rs - bed::has_overlap (line 49) [INFO] [stdout] src/bed.rs - bed::parse_bed (line 165) [INFO] [stdout] src/bed.rs - bed::parse_bed_rec (line 129) [INFO] [stdout] src/bed.rs - bed::parse_region (line 89) [INFO] [stdout] src/bed.rs - bed::split_region (line 196) [INFO] [stdout] src/fastx.rs - fastx::run_split_fastx (line 5) [INFO] [stdout] src/getfasta.rs - getfasta::get_fasta (line 12) [INFO] [stdout] src/liftover.rs - liftover::break_paf_on_indels (line 170) [INFO] [stdout] src/myio.rs - myio::reader (line 38) [INFO] [stdout] src/nucfreq.rs - nucfreq::nucfreq (line 41) [INFO] [stdout] src/nucfreq.rs - nucfreq::region_nucfreq (line 99) [INFO] [stdout] src/paf.rs - paf::Paf::from_file (line 55) [INFO] [stdout] src/paf.rs - paf::Paf::sam_header (line 310) [INFO] [stdout] src/paf.rs - paf::PafRecord::get_target_as_region (line 471) [INFO] [stdout] src/paf.rs - paf::PafRecord::new (line 373) [INFO] [stdout] src/paf.rs - paf::PafRecord::to_sam_string (line 862) [INFO] [stdout] src/paf.rs - paf::cigar_from_str (line 1001) [INFO] [stdout] src/paf.rs - paf::consumes_query (line 954) [INFO] [stdout] src/paf.rs - paf::cs_to_cigar (line 1104) [INFO] [stdout] src/paf.rs - paf::is_match (line 967) [INFO] [stdout] src/suns.rs - suns::Genome::from_file (line 50) [INFO] [stdout] src/suns.rs - suns::Genome::get_longest_perfect_repeats (line 85) [INFO] [stdout] src/trim_overlap.rs - trim_overlap::trim_overlapping_pafs (line 22) [INFO] [stdout] [INFO] [stdout] test result: FAILED. 3 passed; 23 failed; 0 ignored; 0 measured; 0 filtered out; finished in 11.29s [INFO] [stdout] [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] running `Command { std: "docker" "inspect" "f4367d6ef9152511ca9825d557eb9e4bf9c21a9603dddec3535846d883f24e95", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f4367d6ef9152511ca9825d557eb9e4bf9c21a9603dddec3535846d883f24e95", kill_on_drop: false }` [INFO] [stdout] f4367d6ef9152511ca9825d557eb9e4bf9c21a9603dddec3535846d883f24e95