[INFO] cloning repository https://github.com/mooreryan/bio_ballyhoo [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mooreryan/bio_ballyhoo" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fbio_ballyhoo", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fbio_ballyhoo'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 4895a9c2f64f3443dbc032002a5d6a371a1062d0 [INFO] testing mooreryan/bio_ballyhoo against 1.86.0 for beta-1.87-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmooreryan%2Fbio_ballyhoo" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mooreryan/bio_ballyhoo on toolchain 1.86.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.86.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mooreryan/bio_ballyhoo [INFO] finished tweaking git repo https://github.com/mooreryan/bio_ballyhoo [INFO] tweaked toml for git repo https://github.com/mooreryan/bio_ballyhoo written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/mooreryan/bio_ballyhoo already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.86.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded triple_accel v0.3.4 [INFO] [stderr] Downloaded bio-types v0.10.0 [INFO] [stderr] Downloaded statrs v0.12.0 [INFO] [stderr] Downloaded bio v0.32.0 [INFO] [stderr] Downloaded console v0.14.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 698ee5bdf2ff097f5d31ccb1769cd87d8e131639f158cff623600c003da0340f [INFO] running `Command { std: "docker" "start" "-a" "698ee5bdf2ff097f5d31ccb1769cd87d8e131639f158cff623600c003da0340f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "698ee5bdf2ff097f5d31ccb1769cd87d8e131639f158cff623600c003da0340f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "698ee5bdf2ff097f5d31ccb1769cd87d8e131639f158cff623600c003da0340f", kill_on_drop: false }` [INFO] [stdout] 698ee5bdf2ff097f5d31ccb1769cd87d8e131639f158cff623600c003da0340f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a8828aad7ca0a55a7a39a04ad30484a8fdabac8aa8b1a8259932419ff85c4791 [INFO] running `Command { std: "docker" "start" "-a" "a8828aad7ca0a55a7a39a04ad30484a8fdabac8aa8b1a8259932419ff85c4791", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.24 [INFO] [stderr] Compiling unicode-xid v0.2.1 [INFO] [stderr] Compiling syn v1.0.60 [INFO] [stderr] Compiling libc v0.2.86 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling serde_derive v1.0.123 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling serde v1.0.123 [INFO] [stderr] Compiling memchr v2.3.4 [INFO] [stderr] Compiling version_check v0.9.2 [INFO] [stderr] Compiling unicode-segmentation v1.7.1 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling ppv-lite86 v0.2.10 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling once_cell v1.5.2 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling byteorder v1.4.2 [INFO] [stderr] Compiling thread_local v1.1.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling regex-syntax v0.6.22 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling proc-macro-error-attr v1.0.4 [INFO] [stderr] Compiling proc-macro-error v1.0.4 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling indexmap v1.6.1 [INFO] [stderr] Compiling num-integer v0.1.44 [INFO] [stderr] Compiling num-complex v0.2.4 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Compiling heck v0.3.2 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling regex-automata v0.1.9 [INFO] [stderr] Compiling ndarray v0.13.1 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling aho-corasick v0.7.15 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling hashbrown v0.9.1 [INFO] [stderr] Compiling csv-core v0.1.10 [INFO] [stderr] Compiling matrixmultiply v0.2.4 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling either v1.6.1 [INFO] [stderr] Compiling getrandom v0.2.2 [INFO] [stderr] Compiling bio v0.32.0 [INFO] [stderr] Compiling itoa v0.4.7 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling array-macro v1.0.5 [INFO] [stderr] Compiling fixedbitset v0.2.0 [INFO] [stderr] Compiling itertools v0.9.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bit-set v0.5.2 [INFO] [stderr] Compiling triple_accel v0.3.4 [INFO] [stderr] Compiling strum v0.18.0 [INFO] [stderr] Compiling bytecount v0.6.2 [INFO] [stderr] Compiling fnv v1.0.7 [INFO] [stderr] Compiling number_prefix v0.3.0 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling terminal_size v0.1.16 [INFO] [stderr] Compiling rand_core v0.5.1 [INFO] [stderr] Compiling rand_core v0.6.2 [INFO] [stderr] Compiling rand_chacha v0.2.2 [INFO] [stderr] Compiling petgraph v0.5.1 [INFO] [stderr] Compiling rand_chacha v0.3.0 [INFO] [stderr] Compiling ordered-float v1.1.1 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling rand v0.8.3 [INFO] [stderr] Compiling rand v0.7.3 [INFO] [stderr] Compiling regex v1.4.3 [INFO] [stderr] Compiling statrs v0.12.0 [INFO] [stderr] Compiling console v0.14.0 [INFO] [stderr] Compiling indicatif v0.15.0 [INFO] [stderr] Compiling structopt-derive v0.4.14 [INFO] [stderr] Compiling snafu-derive v0.6.10 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling strum_macros v0.20.1 [INFO] [stderr] Compiling enum-map-derive v0.4.6 [INFO] [stderr] Compiling strum_macros v0.18.0 [INFO] [stderr] Compiling getset v0.0.9 [INFO] [stderr] Compiling enum-map v0.6.4 [INFO] [stderr] Compiling snafu v0.6.10 [INFO] [stderr] Compiling bio-types v0.10.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling bstr v0.2.15 [INFO] [stderr] Compiling multimap v0.8.2 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling csv v1.1.5 [INFO] [stderr] Compiling structopt v0.3.21 [INFO] [stderr] Compiling make_reads v0.1.0 (/opt/rustwide/workdir/make_reads) [INFO] [stderr] Compiling derep v0.1.0 (/opt/rustwide/workdir/derep) [INFO] [stderr] Compiling msa_pairwise v0.2.0 (/opt/rustwide/workdir/msa_pairwise_identity) [INFO] [stderr] Compiling simple_headers v0.1.0 (/opt/rustwide/workdir/simple_headers) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 02s [INFO] running `Command { std: "docker" "inspect" "a8828aad7ca0a55a7a39a04ad30484a8fdabac8aa8b1a8259932419ff85c4791", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a8828aad7ca0a55a7a39a04ad30484a8fdabac8aa8b1a8259932419ff85c4791", kill_on_drop: false }` [INFO] [stdout] a8828aad7ca0a55a7a39a04ad30484a8fdabac8aa8b1a8259932419ff85c4791 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:b0b074c097205a61b89e8ad263052f976b2b332c4dc5f02aef1fe52501660d6e" "/opt/rustwide/cargo-home/bin/cargo" "+1.86.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 08808b230989e93f53c93825715a5527857df23d70bfb76cbe6cd1fbcf4aebf9 [INFO] running `Command { std: "docker" "start" "-a" "08808b230989e93f53c93825715a5527857df23d70bfb76cbe6cd1fbcf4aebf9", kill_on_drop: false }` [INFO] [stderr] Compiling simple_headers v0.1.0 (/opt/rustwide/workdir/simple_headers) [INFO] [stderr] Compiling msa_pairwise v0.2.0 (/opt/rustwide/workdir/msa_pairwise_identity) [INFO] [stderr] Compiling derep v0.1.0 (/opt/rustwide/workdir/derep) [INFO] [stderr] Compiling make_reads v0.1.0 (/opt/rustwide/workdir/make_reads) [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustc4PFdDs/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libstructopt-5a4996f35bf12dce.rlib,libclap-999ab998becfa13d.rlib,libtextwrap-33500089db013142.rlib,libunicode_width-5e83a6583acb453f.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,libbio-9948bd36b2c8c97d.rlib,libstrum-498ee7f216701246.rlib,libcsv-eeb9d94206b5ff26.rlib,libryu-ca31e805b7fddb74.rlib,libitoa-c90628d6b1dd0e13.rlib,libcsv_core-fd7249c0469e8778.rlib,libbstr-e9053836d83f2954.rlib,libregex_automata-3b01ff193111f790.rlib,libbytecount-32a9bceb3beabd6c.rlib,libtriple_accel-8444bc25b2d9f359.rlib,libitertools_num-983a0957e0271fb7.rlib,libenum_map-b73328da504fcb9e.rlib,libarray_macro-3809187e78fbca2b.rlib,libstatrs-bd61a7c67851896c.rlib,librand-ece756a509b648f1.rlib,librand_chacha-0d39a1087b391be2.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-0ef02a58607d4cc1.rlib,libgetrandom-2ab7733d07274063.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-d336af2de9cf7cfc.rlib,libndarray-574cb0788dd79279.rlib,libmatrixmultiply-19cd98264ceef39c.rlib,libnum_complex-43505859ba747540.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-d8fe7a5c4b37819e.rlib,libitertools-985e74e1826839be.rlib,libeither-a35c13a0a530b55b.rlib,libnum_integer-fdc1073dfa5fecad.rlib,libbv-a5efd67877a57cfc.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libbit_set-a48823e10a80c9b4.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-7fe33e98641abbdc.rlib,libregex-aeb651ece29a941c.rlib,libthread_local-c901da9b2df1ee1b.rlib,libonce_cell-f0baaf2663e18e75.rlib,libregex_syntax-e9297ab58320984b.rlib,libaho_corasick-218905c2d897eaa7.rlib,libmemchr-4e93a4a8ccf24baa.rlib,libquick_error-9e58c57800264958.rlib,libfxhash-44afcc26718fbd4b.rlib,libbyteorder-42b00c38fd7e23ef.rlib,libpetgraph-9fca5e9af7f7d29a.rlib,libindexmap-1ba8be5889a6ce36.rlib,libhashbrown-95d8ac68b5302d17.rlib,libfixedbitset-e3b902dd35e864de.rlib,libsnafu-2e59aa3a804a2b10.rlib,libdoc_comment-0e57c99f39f99234.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-d627ffb6768d1b91.rlib,libnum_traits-ff44afebaa84c6d5.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/derep-7d38965e1b14998a" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `derep` (lib test) due to 1 previous error [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcoBhPRj/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libstructopt-5a4996f35bf12dce.rlib,libclap-999ab998becfa13d.rlib,libtextwrap-33500089db013142.rlib,libunicode_width-5e83a6583acb453f.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,libbio-9948bd36b2c8c97d.rlib,libstrum-498ee7f216701246.rlib,libcsv-eeb9d94206b5ff26.rlib,libryu-ca31e805b7fddb74.rlib,libitoa-c90628d6b1dd0e13.rlib,libcsv_core-fd7249c0469e8778.rlib,libbstr-e9053836d83f2954.rlib,libregex_automata-3b01ff193111f790.rlib,libbytecount-32a9bceb3beabd6c.rlib,libtriple_accel-8444bc25b2d9f359.rlib,libitertools_num-983a0957e0271fb7.rlib,libenum_map-b73328da504fcb9e.rlib,libarray_macro-3809187e78fbca2b.rlib,libstatrs-bd61a7c67851896c.rlib,librand-ece756a509b648f1.rlib,librand_chacha-0d39a1087b391be2.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-0ef02a58607d4cc1.rlib,libgetrandom-2ab7733d07274063.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-d336af2de9cf7cfc.rlib,libndarray-574cb0788dd79279.rlib,libmatrixmultiply-19cd98264ceef39c.rlib,libnum_complex-43505859ba747540.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-d8fe7a5c4b37819e.rlib,libitertools-985e74e1826839be.rlib,libeither-a35c13a0a530b55b.rlib,libnum_integer-fdc1073dfa5fecad.rlib,libbv-a5efd67877a57cfc.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libbit_set-a48823e10a80c9b4.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-7fe33e98641abbdc.rlib,libregex-aeb651ece29a941c.rlib,libthread_local-c901da9b2df1ee1b.rlib,libonce_cell-f0baaf2663e18e75.rlib,libregex_syntax-e9297ab58320984b.rlib,libaho_corasick-218905c2d897eaa7.rlib,libmemchr-4e93a4a8ccf24baa.rlib,libquick_error-9e58c57800264958.rlib,libfxhash-44afcc26718fbd4b.rlib,libbyteorder-42b00c38fd7e23ef.rlib,libpetgraph-9fca5e9af7f7d29a.rlib,libindexmap-1ba8be5889a6ce36.rlib,libhashbrown-95d8ac68b5302d17.rlib,libfixedbitset-e3b902dd35e864de.rlib,libsnafu-2e59aa3a804a2b10.rlib,libdoc_comment-0e57c99f39f99234.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-d627ffb6768d1b91.rlib,libnum_traits-ff44afebaa84c6d5.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/simple_headers-9cb181aa395894b3" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `simple_headers` (bin "simple_headers" test) due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcxiw8Yb/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libstructopt-5a4996f35bf12dce.rlib,liblazy_static-2c4e06f363908d28.rlib,libclap-999ab998becfa13d.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libtextwrap-33500089db013142.rlib,libunicode_width-5e83a6583acb453f.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,librand-4dc8fed200d833f8.rlib,librand_chacha-4fb111c195e8f6f1.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-05ec1f1d4a4658e7.rlib,libgetrandom-b5193972115095d9.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/make_reads-844d8e36e63a2ed4" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcL1o5Bs/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libmsa_pairwise-7d6af887faa50ffe.rlib,libstructopt-5a4996f35bf12dce.rlib,libclap-999ab998becfa13d.rlib,libtextwrap-33500089db013142.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,libindicatif-05326031ca4961e4.rlib,libconsole-fe68f84cbffcb6c5.rlib,libterminal_size-51f0558853bbd9f6.rlib,libunicode_width-5e83a6583acb453f.rlib,libnumber_prefix-ba36872f6db338b0.rlib,libbio-9948bd36b2c8c97d.rlib,libstrum-498ee7f216701246.rlib,libcsv-eeb9d94206b5ff26.rlib,libryu-ca31e805b7fddb74.rlib,libitoa-c90628d6b1dd0e13.rlib,libcsv_core-fd7249c0469e8778.rlib,libbstr-e9053836d83f2954.rlib,libregex_automata-3b01ff193111f790.rlib,libbytecount-32a9bceb3beabd6c.rlib,libtriple_accel-8444bc25b2d9f359.rlib,libitertools_num-983a0957e0271fb7.rlib,libenum_map-b73328da504fcb9e.rlib,libarray_macro-3809187e78fbca2b.rlib,libstatrs-bd61a7c67851896c.rlib,librand-ece756a509b648f1.rlib,librand_chacha-0d39a1087b391be2.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-0ef02a58607d4cc1.rlib,libgetrandom-2ab7733d07274063.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-d336af2de9cf7cfc.rlib,libndarray-574cb0788dd79279.rlib,libmatrixmultiply-19cd98264ceef39c.rlib,libnum_complex-43505859ba747540.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-d8fe7a5c4b37819e.rlib,libitertools-985e74e1826839be.rlib,libeither-a35c13a0a530b55b.rlib,libnum_integer-fdc1073dfa5fecad.rlib,libbv-a5efd67877a57cfc.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libbit_set-a48823e10a80c9b4.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-7fe33e98641abbdc.rlib,libregex-aeb651ece29a941c.rlib,libthread_local-c901da9b2df1ee1b.rlib,libonce_cell-f0baaf2663e18e75.rlib,libregex_syntax-e9297ab58320984b.rlib,libaho_corasick-218905c2d897eaa7.rlib,libmemchr-4e93a4a8ccf24baa.rlib,libquick_error-9e58c57800264958.rlib,libfxhash-44afcc26718fbd4b.rlib,libbyteorder-42b00c38fd7e23ef.rlib,libpetgraph-9fca5e9af7f7d29a.rlib,libindexmap-1ba8be5889a6ce36.rlib,libhashbrown-95d8ac68b5302d17.rlib,libfixedbitset-e3b902dd35e864de.rlib,libsnafu-2e59aa3a804a2b10.rlib,libdoc_comment-0e57c99f39f99234.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-d627ffb6768d1b91.rlib,libnum_traits-ff44afebaa84c6d5.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/msa_pairwise-b2b7564d9eee7375" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `make_reads` (lib test) due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustcJvv7Vc/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libderep-4b589e90ebccd9fb.rlib,libstructopt-5a4996f35bf12dce.rlib,libclap-999ab998becfa13d.rlib,libtextwrap-33500089db013142.rlib,libunicode_width-5e83a6583acb453f.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,libbio-9948bd36b2c8c97d.rlib,libstrum-498ee7f216701246.rlib,libcsv-eeb9d94206b5ff26.rlib,libryu-ca31e805b7fddb74.rlib,libitoa-c90628d6b1dd0e13.rlib,libcsv_core-fd7249c0469e8778.rlib,libbstr-e9053836d83f2954.rlib,libregex_automata-3b01ff193111f790.rlib,libbytecount-32a9bceb3beabd6c.rlib,libtriple_accel-8444bc25b2d9f359.rlib,libitertools_num-983a0957e0271fb7.rlib,libenum_map-b73328da504fcb9e.rlib,libarray_macro-3809187e78fbca2b.rlib,libstatrs-bd61a7c67851896c.rlib,librand-ece756a509b648f1.rlib,librand_chacha-0d39a1087b391be2.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-0ef02a58607d4cc1.rlib,libgetrandom-2ab7733d07274063.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-d336af2de9cf7cfc.rlib,libndarray-574cb0788dd79279.rlib,libmatrixmultiply-19cd98264ceef39c.rlib,libnum_complex-43505859ba747540.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-d8fe7a5c4b37819e.rlib,libitertools-985e74e1826839be.rlib,libeither-a35c13a0a530b55b.rlib,libnum_integer-fdc1073dfa5fecad.rlib,libbv-a5efd67877a57cfc.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libbit_set-a48823e10a80c9b4.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-7fe33e98641abbdc.rlib,libregex-aeb651ece29a941c.rlib,libthread_local-c901da9b2df1ee1b.rlib,libonce_cell-f0baaf2663e18e75.rlib,libregex_syntax-e9297ab58320984b.rlib,libaho_corasick-218905c2d897eaa7.rlib,libmemchr-4e93a4a8ccf24baa.rlib,libquick_error-9e58c57800264958.rlib,libfxhash-44afcc26718fbd4b.rlib,libbyteorder-42b00c38fd7e23ef.rlib,libpetgraph-9fca5e9af7f7d29a.rlib,libindexmap-1ba8be5889a6ce36.rlib,libhashbrown-95d8ac68b5302d17.rlib,libfixedbitset-e3b902dd35e864de.rlib,libsnafu-2e59aa3a804a2b10.rlib,libdoc_comment-0e57c99f39f99234.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-d627ffb6768d1b91.rlib,libnum_traits-ff44afebaa84c6d5.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/derep-6cf3b7d556e81b3e" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `derep` (bin "derep" test) due to 1 previous error [INFO] [stderr] error: could not compile `msa_pairwise` (bin "msa_pairwise" test) due to 1 previous error [INFO] [stdout] error: linking with `cc` failed: exit status: 1 [INFO] [stdout] | [INFO] [stdout] = note: "cc" "-m64" "/tmp/rustczgqut9/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libtest-*,libgetopts-*,libunicode_width-*,librustc_std_workspace_std-*}.rlib" "/opt/rustwide/target/debug/deps/{libstructopt-5a4996f35bf12dce.rlib,libclap-999ab998becfa13d.rlib,libtextwrap-33500089db013142.rlib,libstrsim-99035ec7a32f6be3.rlib,libbitflags-1b196b4123b25cbc.rlib,libatty-4d96446ec3c75ae6.rlib,libansi_term-9c490bd688edb169.rlib,libindicatif-05326031ca4961e4.rlib,libconsole-fe68f84cbffcb6c5.rlib,libterminal_size-51f0558853bbd9f6.rlib,libunicode_width-5e83a6583acb453f.rlib,libnumber_prefix-ba36872f6db338b0.rlib,libbio-9948bd36b2c8c97d.rlib,libstrum-498ee7f216701246.rlib,libcsv-eeb9d94206b5ff26.rlib,libryu-ca31e805b7fddb74.rlib,libitoa-c90628d6b1dd0e13.rlib,libcsv_core-fd7249c0469e8778.rlib,libbstr-e9053836d83f2954.rlib,libregex_automata-3b01ff193111f790.rlib,libbytecount-32a9bceb3beabd6c.rlib,libtriple_accel-8444bc25b2d9f359.rlib,libitertools_num-983a0957e0271fb7.rlib,libenum_map-b73328da504fcb9e.rlib,libarray_macro-3809187e78fbca2b.rlib,libstatrs-bd61a7c67851896c.rlib,librand-ece756a509b648f1.rlib,librand_chacha-0d39a1087b391be2.rlib,libppv_lite86-4f276d46d75258d8.rlib,librand_core-0ef02a58607d4cc1.rlib,libgetrandom-2ab7733d07274063.rlib,liblibc-1fcba39f3afed4fc.rlib,libcfg_if-da7e6a5cb20f1238.rlib,libordered_float-d336af2de9cf7cfc.rlib,libndarray-574cb0788dd79279.rlib,libmatrixmultiply-19cd98264ceef39c.rlib,libnum_complex-43505859ba747540.rlib,librawpointer-a88cefc763b2ce2d.rlib,libmultimap-d8fe7a5c4b37819e.rlib,libitertools-985e74e1826839be.rlib,libeither-a35c13a0a530b55b.rlib,libnum_integer-fdc1073dfa5fecad.rlib,libbv-a5efd67877a57cfc.rlib,libvec_map-4c281ebdfcdfb23e.rlib,libserde-50aeb2b13ed4f45d.rlib,libbit_set-a48823e10a80c9b4.rlib,libbit_vec-ed19a9d324f969c4.rlib,libbio_types-7fe33e98641abbdc.rlib,libregex-aeb651ece29a941c.rlib,libthread_local-c901da9b2df1ee1b.rlib,libonce_cell-f0baaf2663e18e75.rlib,libregex_syntax-e9297ab58320984b.rlib,libaho_corasick-218905c2d897eaa7.rlib,libmemchr-4e93a4a8ccf24baa.rlib,libquick_error-9e58c57800264958.rlib,libfxhash-44afcc26718fbd4b.rlib,libbyteorder-42b00c38fd7e23ef.rlib,libpetgraph-9fca5e9af7f7d29a.rlib,libindexmap-1ba8be5889a6ce36.rlib,libhashbrown-95d8ac68b5302d17.rlib,libfixedbitset-e3b902dd35e864de.rlib,libsnafu-2e59aa3a804a2b10.rlib,libdoc_comment-0e57c99f39f99234.rlib,libnewtype_derive-60d4b1d82a13a56e.rlib,liblazy_static-2c4e06f363908d28.rlib,libcustom_derive-e1bd561eaa671a46.rlib,libapprox-d627ffb6768d1b91.rlib,libnum_traits-ff44afebaa84c6d5.rlib}.rlib" "/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-*,libpanic_unwind-*,libobject-*,libmemchr-*,libaddr2line-*,libgimli-*,librustc_demangle-*,libstd_detect-*,libhashbrown-*,librustc_std_workspace_alloc-*,libminiz_oxide-*,libadler2-*,libunwind-*,libcfg_if-*,liblibc-*,liballoc-*,librustc_std_workspace_core-*,libcore-*,libcompiler_builtins-*}.rlib" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/deps/msa_pairwise-e06f39bfcc2eb0a1" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs" [INFO] [stdout] = note: some arguments are omitted. use `--verbose` to show all linker arguments [INFO] [stdout] = note: /usr/bin/ld: final link failed: No space left on device [INFO] [stdout] collect2: error: ld returned 1 exit status [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] error: could not compile `msa_pairwise` (lib test) due to 1 previous error [INFO] running `Command { std: "docker" "inspect" "08808b230989e93f53c93825715a5527857df23d70bfb76cbe6cd1fbcf4aebf9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "08808b230989e93f53c93825715a5527857df23d70bfb76cbe6cd1fbcf4aebf9", kill_on_drop: false }` [INFO] [stdout] 08808b230989e93f53c93825715a5527857df23d70bfb76cbe6cd1fbcf4aebf9