[INFO] cloning repository https://github.com/genomicsoup/simmr
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/genomicsoup/simmr" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomicsoup%2Fsimmr", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomicsoup%2Fsimmr'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 555a88cf1a642670448f6c3a99fbfd4c9c951683
[INFO] documenting genomicsoup/simmr against 1.85.0 for beta-1.86-rustdoc-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fgenomicsoup%2Fsimmr" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/genomicsoup/simmr on toolchain 1.85.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.85.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/genomicsoup/simmr
[INFO] finished tweaking git repo https://github.com/genomicsoup/simmr
[INFO] tweaked toml for git repo https://github.com/genomicsoup/simmr written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/genomicsoup/simmr already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.85.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles v0.40.0
[INFO] [stderr]   Downloaded clap_lex v0.2.2
[INFO] [stderr]   Downloaded streaming-stats v0.2.3
[INFO] [stderr]   Downloaded noodles-bgzf v0.22.0
[INFO] [stderr]   Downloaded noodles-core v0.11.0
[INFO] [stderr]   Downloaded noodles-bam v0.34.0
[INFO] [stderr]   Downloaded noodles-fasta v0.23.0
[INFO] [stderr]   Downloaded noodles-sam v0.31.0
[INFO] [stderr]   Downloaded noodles-csi v0.19.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] bc30ee0f90398330702913cf4a99247178f1f434be896b19771f722c0c0fb0b1
[INFO] running `Command { std: "docker" "start" "-a" "bc30ee0f90398330702913cf4a99247178f1f434be896b19771f722c0c0fb0b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "bc30ee0f90398330702913cf4a99247178f1f434be896b19771f722c0c0fb0b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "bc30ee0f90398330702913cf4a99247178f1f434be896b19771f722c0c0fb0b1", kill_on_drop: false }`
[INFO] [stdout] bc30ee0f90398330702913cf4a99247178f1f434be896b19771f722c0c0fb0b1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "doc" "--frozen" "--no-deps" "--document-private-items" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 18531ba7cc1b55a4bade0444617c21f7963b203159624a3e1ab13c2bd3c0e166
[INFO] running `Command { std: "docker" "start" "-a" "18531ba7cc1b55a4bade0444617c21f7963b203159624a3e1ab13c2bd3c0e166", kill_on_drop: false }`
[INFO] [stderr] warning: virtual workspace defaulting to `resolver = "1"` despite one or more workspace members being on edition 2021 which implies `resolver = "2"`
[INFO] [stderr] note: to keep the current resolver, specify `workspace.resolver = "1"` in the workspace root's manifest
[INFO] [stderr] note: to use the edition 2021 resolver, specify `workspace.resolver = "2"` in the workspace root's manifest
[INFO] [stderr] note: for more details see https://doc.rust-lang.org/cargo/reference/resolver.html#resolver-versions
[INFO] [stderr]     Checking cfg-if v1.0.0
[INFO] [stderr]    Compiling autocfg v1.1.0
[INFO] [stderr]    Compiling libc v0.2.126
[INFO] [stderr]    Compiling proc-macro2 v1.0.39
[INFO] [stderr]    Compiling unicode-ident v1.0.1
[INFO] [stderr]    Compiling syn v1.0.96
[INFO] [stderr]    Compiling crossbeam-utils v0.8.15
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]     Checking adler v1.0.2
[INFO] [stderr]    Compiling cc v1.0.73
[INFO] [stderr]    Compiling serde_derive v1.0.137
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]     Checking static_assertions v1.1.0
[INFO] [stderr]    Compiling pkg-config v0.3.25
[INFO] [stderr]    Compiling libm v0.2.2
[INFO] [stderr]    Compiling serde v1.0.137
[INFO] [stderr]     Checking lexical-util v0.8.5
[INFO] [stderr]     Checking once_cell v1.12.0
[INFO] [stderr]     Checking miniz_oxide v0.5.3
[INFO] [stderr]     Checking hashbrown v0.11.2
[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling indexmap v1.8.2
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling memoffset v0.8.0
[INFO] [stderr]     Checking byteorder v1.4.3
[INFO] [stderr]     Checking bytes v1.1.0
[INFO] [stderr]     Checking lazy_static v1.4.0
[INFO] [stderr]     Checking lexical-write-integer v0.8.5
[INFO] [stderr]     Checking lexical-parse-integer v0.8.6
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.14
[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]     Checking crossbeam-channel v0.5.8
[INFO] [stderr]    Compiling log v0.4.17
[INFO] [stderr]     Checking noodles-core v0.11.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.16
[INFO] [stderr]     Checking lexical-parse-float v0.8.5
[INFO] [stderr]     Checking flate2 v1.0.24
[INFO] [stderr]     Checking lexical-write-float v0.8.5
[INFO] [stderr]     Checking tracing-core v0.1.27
[INFO] [stderr]     Checking scopeguard v1.1.0
[INFO] [stderr]     Checking bit-vec v0.6.3
[INFO] [stderr]    Compiling rayon-core v1.11.0
[INFO] [stderr]    Compiling heck v0.4.0
[INFO] [stderr]     Checking os_str_bytes v6.1.0
[INFO] [stderr]     Checking bitflags v2.3.1
[INFO] [stderr]     Checking sharded-slab v0.1.4
[INFO] [stderr]    Compiling quote v1.0.18
[INFO] [stderr]     Checking getrandom v0.2.7
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.19
[INFO] [stderr]     Checking clap_lex v0.2.2
[INFO] [stderr]     Checking rand_core v0.6.3
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcGUkBaq/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-6273572f18644c87.rlib,libpanic_unwind-267e668abf74a283.rlib,libobject-ec6154ccae37a33e.rlib,libmemchr-500edd5521c440d4.rlib,libaddr2line-86d8d9428792e8ef.rlib,libgimli-10f06487503767c2.rlib,librustc_demangle-6a38424de1e5bca5.rlib,libstd_detect-de9763ea1c19dca3.rlib,libhashbrown-a7f5bb2f736d3c49.rlib,librustc_std_workspace_alloc-7e368919bdc4a44c.rlib,libminiz_oxide-376454d49910c786.rlib,libadler-fa99f5692b5dce85.rlib,libunwind-91cafdaf16f7fe40.rlib,libcfg_if-f7ee3f1ea78d9dae.rlib,liblibc-d3a35665f881365a.rlib,liballoc-715bc629a88bca60.rlib,librustc_std_workspace_core-ae70165d1278cff7.rlib,libcore-406129d0e3fbc101.rlib,libcompiler_builtins-1af05515ab19524a.rlib}" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/build/rayon-core-4ebeb94aa8834a61/build_script_build-4ebeb94aa8834a61" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: /usr/bin/ld: final link failed: No space left on device
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Checking atty v0.2.14
[INFO] [stderr] error: could not compile `rayon-core` (build script) due to 1 previous error
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] [stdout] error: failed to build archive at `/opt/rustwide/target/debug/deps/libquote-1052c70cb934e88f.rlib`: No space left on device (os error 28)
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcJhPvw9/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libpkg_config-5fb7abcf4f46b0d4.rlib,libcc-c33d9dbe0f03c63b.rlib}" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-6273572f18644c87.rlib,libpanic_unwind-267e668abf74a283.rlib,libobject-ec6154ccae37a33e.rlib,libmemchr-500edd5521c440d4.rlib,libaddr2line-86d8d9428792e8ef.rlib,libgimli-10f06487503767c2.rlib,librustc_demangle-6a38424de1e5bca5.rlib,libstd_detect-de9763ea1c19dca3.rlib,libhashbrown-a7f5bb2f736d3c49.rlib,librustc_std_workspace_alloc-7e368919bdc4a44c.rlib,libminiz_oxide-376454d49910c786.rlib,libadler-fa99f5692b5dce85.rlib,libunwind-91cafdaf16f7fe40.rlib,libcfg_if-f7ee3f1ea78d9dae.rlib,liblibc-d3a35665f881365a.rlib,liballoc-715bc629a88bca60.rlib,librustc_std_workspace_core-ae70165d1278cff7.rlib,libcore-406129d0e3fbc101.rlib,libcompiler_builtins-1af05515ab19524a.rlib}" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/build/bzip2-sys-a0646ba9f0e9da3e/build_script_build-a0646ba9f0e9da3e" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: /usr/bin/ld: final link failed: No space left on device
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `quote` (lib) due to 1 previous error
[INFO] [stderr] error: could not compile `bzip2-sys` (build script) due to 1 previous error
[INFO] [stdout] error: linking with `cc` failed: exit status: 1
[INFO] [stdout]   |
[INFO] [stdout]   = note: LC_ALL="C" PATH="/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/bin:/opt/rustwide/cargo-home/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin" VSLANG="1033" "cc" "-m64" "/tmp/rustcIluBfq/symbols.o" "<2 object files omitted>" "-Wl,--as-needed" "-Wl,-Bstatic" "/opt/rustwide/target/debug/deps/{libcc-c33d9dbe0f03c63b.rlib,libpkg_config-5fb7abcf4f46b0d4.rlib}" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib/{libstd-6273572f18644c87.rlib,libpanic_unwind-267e668abf74a283.rlib,libobject-ec6154ccae37a33e.rlib,libmemchr-500edd5521c440d4.rlib,libaddr2line-86d8d9428792e8ef.rlib,libgimli-10f06487503767c2.rlib,librustc_demangle-6a38424de1e5bca5.rlib,libstd_detect-de9763ea1c19dca3.rlib,libhashbrown-a7f5bb2f736d3c49.rlib,librustc_std_workspace_alloc-7e368919bdc4a44c.rlib,libminiz_oxide-376454d49910c786.rlib,libadler-fa99f5692b5dce85.rlib,libunwind-91cafdaf16f7fe40.rlib,libcfg_if-f7ee3f1ea78d9dae.rlib,liblibc-d3a35665f881365a.rlib,liballoc-715bc629a88bca60.rlib,librustc_std_workspace_core-ae70165d1278cff7.rlib,libcore-406129d0e3fbc101.rlib,libcompiler_builtins-1af05515ab19524a.rlib}" "-Wl,-Bdynamic" "-lgcc_s" "-lutil" "-lrt" "-lpthread" "-lm" "-ldl" "-lc" "-Wl,--eh-frame-hdr" "-Wl,-z,noexecstack" "-L" "/opt/rustwide/rustup-home/toolchains/1.85.0-x86_64-unknown-linux-gnu/lib/rustlib/x86_64-unknown-linux-gnu/lib" "-o" "/opt/rustwide/target/debug/build/lzma-sys-0fa456223c8ca7b2/build_script_build-0fa456223c8ca7b2" "-Wl,--gc-sections" "-pie" "-Wl,-z,relro,-z,now" "-nodefaultlibs"
[INFO] [stdout]   = note: some arguments are omitted. use `--verbose` to show all linker arguments
[INFO] [stdout]   = note: /usr/bin/ld: final link failed: No space left on device
[INFO] [stdout]           collect2: error: ld returned 1 exit status
[INFO] [stdout]           
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `lzma-sys` (build script) due to 1 previous error
[INFO] [stderr] error: could not parse/generate dep info at: /opt/rustwide/target/debug/deps/sharded_slab-cf0fe87a5bdb02c4.d
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   failed to write `/opt/rustwide/target/debug/.fingerprint/sharded-slab-cf0fe87a5bdb02c4/dep-lib-sharded_slab`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   No space left on device (os error 28)
[INFO] [stdout] error: couldn't create a temp dir: No space left on device (os error 28) at path "/opt/rustwide/target/debug/deps/rmetao7d7cM"
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr] error: could not compile `num-traits` (lib) due to 1 previous error
[INFO] running `Command { std: "docker" "inspect" "18531ba7cc1b55a4bade0444617c21f7963b203159624a3e1ab13c2bd3c0e166", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "18531ba7cc1b55a4bade0444617c21f7963b203159624a3e1ab13c2bd3c0e166", kill_on_drop: false }`
[INFO] [stdout] 18531ba7cc1b55a4bade0444617c21f7963b203159624a3e1ab13c2bd3c0e166
