[INFO] cloning repository https://github.com/turnage/ecoli
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/turnage/ecoli" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fturnage%2Fecoli", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fturnage%2Fecoli'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] ee96ba5b687e3dd422db9adf6523104e02d64085
[INFO] testing turnage/ecoli against 1.85.0 for beta-1.86-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fturnage%2Fecoli" "/workspace/builds/worker-7-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc1/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/turnage/ecoli on toolchain 1.85.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.85.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/turnage/ecoli
[INFO] finished tweaking git repo https://github.com/turnage/ecoli
[INFO] tweaked toml for git repo https://github.com/turnage/ecoli written to /workspace/builds/worker-7-tc1/source/Cargo.toml
[INFO] crate git repo https://github.com/turnage/ecoli already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.85.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]     Updating git repository `https://github.com/turnage/hmm.git`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded float-cmp v0.2.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 04c518e0724207b44215084e77e66dece7ef69ae06911e22734c0141c19ec5ae
[INFO] running `Command { std: "docker" "start" "-a" "04c518e0724207b44215084e77e66dece7ef69ae06911e22734c0141c19ec5ae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "04c518e0724207b44215084e77e66dece7ef69ae06911e22734c0141c19ec5ae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "04c518e0724207b44215084e77e66dece7ef69ae06911e22734c0141c19ec5ae", kill_on_drop: false }`
[INFO] [stdout] 04c518e0724207b44215084e77e66dece7ef69ae06911e22734c0141c19ec5ae
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] e1d6c5f0833d4e3274fd892db7b8500c8fec165e37c63b46b4d288cbc014f74f
[INFO] running `Command { std: "docker" "start" "-a" "e1d6c5f0833d4e3274fd892db7b8500c8fec165e37c63b46b4d288cbc014f74f", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]    Compiling libc v0.2.22
[INFO] [stderr]    Compiling num-traits v0.1.37
[INFO] [stderr]    Compiling vec_map v0.7.0
[INFO] [stderr]    Compiling yaml-rust v0.3.5
[INFO] [stderr]    Compiling ansi_term v0.9.0
[INFO] [stderr]    Compiling bitflags v0.8.2
[INFO] [stderr]    Compiling strsim v0.6.0
[INFO] [stderr]    Compiling unicode-segmentation v1.1.0
[INFO] [stderr]    Compiling unicode-width v0.1.4
[INFO] [stderr]    Compiling term_size v0.3.0
[INFO] [stderr]    Compiling atty v0.2.2
[INFO] [stderr]    Compiling float-cmp v0.2.3
[INFO] [stderr]    Compiling hmm v0.1.0 (https://github.com/turnage/hmm.git#b1231019)
[INFO] [stderr]    Compiling clap v2.23.3
[INFO] [stderr]    Compiling ecoli v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated method `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:20:37
[INFO] [stdout]    |
[INFO] [stdout] 20 |         .map_err(|e| String::from(e.description()))
[INFO] [stdout]    |                                     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 6.84s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bitflags v0.8.2
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "e1d6c5f0833d4e3274fd892db7b8500c8fec165e37c63b46b4d288cbc014f74f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e1d6c5f0833d4e3274fd892db7b8500c8fec165e37c63b46b4d288cbc014f74f", kill_on_drop: false }`
[INFO] [stdout] e1d6c5f0833d4e3274fd892db7b8500c8fec165e37c63b46b4d288cbc014f74f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 36c3979a81bb08bf46e71794f4ca54a595c63ac8902428b6dccdfb4658fea4eb
[INFO] running `Command { std: "docker" "start" "-a" "36c3979a81bb08bf46e71794f4ca54a595c63ac8902428b6dccdfb4658fea4eb", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr]    Compiling ecoli v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: use of deprecated method `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stdout]   --> src/main.rs:20:37
[INFO] [stdout]    |
[INFO] [stdout] 20 |         .map_err(|e| String::from(e.description()))
[INFO] [stdout]    |                                     ^^^^^^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(deprecated)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.37s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bitflags v0.8.2
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] running `Command { std: "docker" "inspect" "36c3979a81bb08bf46e71794f4ca54a595c63ac8902428b6dccdfb4658fea4eb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "36c3979a81bb08bf46e71794f4ca54a595c63ac8902428b6dccdfb4658fea4eb", kill_on_drop: false }`
[INFO] [stdout] 36c3979a81bb08bf46e71794f4ca54a595c63ac8902428b6dccdfb4658fea4eb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:3959728d45483eb673ba100a951a6b9f5012970368db2a9e08e0ac9b67c8a5ad" "/opt/rustwide/cargo-home/bin/cargo" "+1.85.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 35c26584cd126c70cea156067ef6fe855e5fceade07fa0d044e3d4c9d5a082ea
[INFO] running `Command { std: "docker" "start" "-a" "35c26584cd126c70cea156067ef6fe855e5fceade07fa0d044e3d4c9d5a082ea", kill_on_drop: false }`
[INFO] [stderr] warning: no edition set: defaulting to the 2015 edition while the latest is 2024
[INFO] [stderr] warning: use of deprecated method `std::error::Error::description`: use the Display impl or to_string()
[INFO] [stderr]   --> src/main.rs:20:37
[INFO] [stderr]    |
[INFO] [stderr] 20 |         .map_err(|e| String::from(e.description()))
[INFO] [stderr]    |                                     ^^^^^^^^^^^
[INFO] [stderr]    |
[INFO] [stderr]    = note: `#[warn(deprecated)]` on by default
[INFO] [stderr] 
[INFO] [stderr] warning: `ecoli` (bin "ecoli" test) generated 1 warning
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.02s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: bitflags v0.8.2
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 1`
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/ecoli-a9009ea4183c058a)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test corpus::base::test::test_parse ... ok
[INFO] [stdout] test corpus::labeler::test::labeler_internal_codons ... ok
[INFO] [stdout] test corpus::sequence::test::display ... ok
[INFO] [stdout] test corpus::sequence::test::from ... ok
[INFO] [stdout] test corpus::sequence::test::label_dna ... ok
[INFO] [stdout] test corpus::sequence::test::labeled_ranges ... ok
[INFO] [stdout] test corpus::sequence::test::noncoding_ranges ... ok
[INFO] [stdout] test corpus::sequence::test::internal_codon_ranges ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "35c26584cd126c70cea156067ef6fe855e5fceade07fa0d044e3d4c9d5a082ea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "35c26584cd126c70cea156067ef6fe855e5fceade07fa0d044e3d4c9d5a082ea", kill_on_drop: false }`
[INFO] [stdout] 35c26584cd126c70cea156067ef6fe855e5fceade07fa0d044e3d4c9d5a082ea