[INFO] cloning repository https://github.com/algbio/flowtigs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/algbio/flowtigs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] dea86c5b526fd0471425d2799f75ba34fa3f0115
[INFO] testing algbio/flowtigs against beta-2025-01-12 for beta-1.85-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Falgbio%2Fflowtigs" "/workspace/builds/worker-7-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc2/source'...
[INFO] [stderr] done.
[INFO] validating manifest of git repo https://github.com/algbio/flowtigs on toolchain beta-2025-01-12
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-01-12" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking git repo https://github.com/algbio/flowtigs
[INFO] finished tweaking git repo https://github.com/algbio/flowtigs
[INFO] tweaked toml for git repo https://github.com/algbio/flowtigs written to /workspace/builds/worker-7-tc2/source/Cargo.toml
[INFO] crate git repo https://github.com/algbio/flowtigs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2025-01-12" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded simplelog v0.12.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded traitsequence v2.0.0
[INFO] [stderr]   Downloaded compact-genome v2.1.1
[INFO] [stderr]   Downloaded self-meter v0.6.0
[INFO] [stderr]   Downloaded traitgraph v5.0.0
[INFO] [stderr]   Downloaded fs v0.0.5
[INFO] [stderr]   Downloaded traitgraph-algo v8.1.0
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded wide v0.7.23
[INFO] [stderr]   Downloaded bitvector v0.1.5
[INFO] [stderr]   Downloaded bigraph v5.0.0
[INFO] [stderr]   Downloaded statrs v0.16.1
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded genome-graph v8.0.0
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:86ea7c7af713d31e8cfdb68a6d0db50b5cf7cbeecde3d112f9f257f747318d36" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-01-12" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9c5ec2ead266370cbbb0e4563be583fcbb5187ea6edb615fb17f966099702338
[INFO] running `Command { std: "docker" "start" "-a" "9c5ec2ead266370cbbb0e4563be583fcbb5187ea6edb615fb17f966099702338", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9c5ec2ead266370cbbb0e4563be583fcbb5187ea6edb615fb17f966099702338", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9c5ec2ead266370cbbb0e4563be583fcbb5187ea6edb615fb17f966099702338", kill_on_drop: false }`
[INFO] [stdout] 9c5ec2ead266370cbbb0e4563be583fcbb5187ea6edb615fb17f966099702338
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:86ea7c7af713d31e8cfdb68a6d0db50b5cf7cbeecde3d112f9f257f747318d36" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-01-12" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 72770239e59404636987a4ef670151c0313a94a59e156f311bf8669d96e0c040
[INFO] running `Command { std: "docker" "start" "-a" "72770239e59404636987a4ef670151c0313a94a59e156f311bf8669d96e0c040", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.85
[INFO] [stderr]    Compiling unicode-ident v1.0.9
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling serde v1.0.204
[INFO] [stderr]    Compiling zerocopy v0.7.34
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling radium v0.7.0
[INFO] [stderr]    Compiling allocator-api2 v0.2.18
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling ahash v0.8.11
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling paste v1.0.15
[INFO] [stderr]    Compiling tap v1.0.1
[INFO] [stderr]    Compiling io-lifetimes v1.0.11
[INFO] [stderr]    Compiling bytemuck v1.16.0
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling wyz v0.5.1
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling rustix v0.37.20
[INFO] [stderr]    Compiling itoa v1.0.6
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling funty v2.0.0
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling linux-raw-sys v0.3.8
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling traitsequence v2.0.0
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling cc v1.0.98
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling ref-cast v1.0.23
[INFO] [stderr]    Compiling either v1.12.0
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling wide v0.7.23
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling bitvec v1.0.1
[INFO] [stderr]    Compiling gimli v0.29.0
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling object v0.35.0
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling time-macros v0.2.18
[INFO] [stderr]    Compiling anstyle-parse v0.2.0
[INFO] [stderr]    Compiling syn v2.0.66
[INFO] [stderr]    Compiling indexmap v2.2.6
[INFO] [stderr]    Compiling miniz_oxide v0.7.3
[INFO] [stderr]    Compiling num_cpus v1.15.0
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling backtrace v0.3.72
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling error-chain v0.12.4
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling anstyle-query v1.0.0
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling rustc-demangle v0.1.24
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling anstyle v1.0.0
[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling is-terminal v0.4.7
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling num_threads v0.1.6
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling anstream v0.3.2
[INFO] [stderr]    Compiling time v0.3.36
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v3.9.2
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling iovec v0.1.4
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling futures v0.1.31
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling bitvector v0.1.5
[INFO] [stderr]    Compiling clap_lex v0.5.0
[INFO] [stderr]    Compiling addr2line v0.22.0
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling strum v0.25.0
[INFO] [stderr]    Compiling clap_builder v4.3.4
[INFO] [stderr]    Compiling colored v2.0.0
[INFO] [stderr]    Compiling bytes v0.4.12
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling disjoint-sets v0.4.2
[INFO] [stderr]    Compiling termcolor v1.1.3
[INFO] [stderr]    Compiling simple_logger v2.3.0
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling simplelog v0.12.1
[INFO] [stderr]    Compiling traitgraph v5.0.0
[INFO] [stderr]    Compiling traitgraph-algo v8.1.0
[INFO] [stderr]    Compiling futures-cpupool v0.1.8
[INFO] [stderr]    Compiling fs v0.0.5
[INFO] [stderr]    Compiling bigraph v5.0.0
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling serde_derive v1.0.204
[INFO] [stderr]    Compiling thiserror-impl v1.0.61
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling ref-cast-impl v1.0.23
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling clap_derive v4.3.2
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling thiserror v1.0.61
[INFO] [stderr]    Compiling compact-genome v2.1.1
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling clap v4.3.4
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling multimap v0.9.1
[INFO] [stderr]    Compiling self-meter v0.6.0
[INFO] [stderr]    Compiling statrs v0.16.1
[INFO] [stderr]    Compiling bio v1.6.0
[INFO] [stderr]    Compiling genome-graph v8.0.0
[INFO] [stderr]    Compiling flowtigs v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 03s
[INFO] running `Command { std: "docker" "inspect" "72770239e59404636987a4ef670151c0313a94a59e156f311bf8669d96e0c040", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "72770239e59404636987a4ef670151c0313a94a59e156f311bf8669d96e0c040", kill_on_drop: false }`
[INFO] [stdout] 72770239e59404636987a4ef670151c0313a94a59e156f311bf8669d96e0c040
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:86ea7c7af713d31e8cfdb68a6d0db50b5cf7cbeecde3d112f9f257f747318d36" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-01-12" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9ae8b0518e8aee86cfe8adc583005f86832b4ee0b62fadd6e783d28b2d741961
[INFO] running `Command { std: "docker" "start" "-a" "9ae8b0518e8aee86cfe8adc583005f86832b4ee0b62fadd6e783d28b2d741961", kill_on_drop: false }`
[INFO] [stderr]    Compiling flowtigs v1.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.94s
[INFO] running `Command { std: "docker" "inspect" "9ae8b0518e8aee86cfe8adc583005f86832b4ee0b62fadd6e783d28b2d741961", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9ae8b0518e8aee86cfe8adc583005f86832b4ee0b62fadd6e783d28b2d741961", kill_on_drop: false }`
[INFO] [stdout] 9ae8b0518e8aee86cfe8adc583005f86832b4ee0b62fadd6e783d28b2d741961
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:86ea7c7af713d31e8cfdb68a6d0db50b5cf7cbeecde3d112f9f257f747318d36" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2025-01-12" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] d00c8cf9f1501456e4b76b66a4e0051ad876d92fa6181d95b19e8a95d62eb464
[INFO] running `Command { std: "docker" "start" "-a" "d00c8cf9f1501456e4b76b66a4e0051ad876d92fa6181d95b19e8a95d62eb464", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/flowtigs-829a27d9399458a5)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "d00c8cf9f1501456e4b76b66a4e0051ad876d92fa6181d95b19e8a95d62eb464", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d00c8cf9f1501456e4b76b66a4e0051ad876d92fa6181d95b19e8a95d62eb464", kill_on_drop: false }`
[INFO] [stdout] d00c8cf9f1501456e4b76b66a4e0051ad876d92fa6181d95b19e8a95d62eb464