[INFO] fetching crate hpo 0.11.0... [INFO] testing hpo-0.11.0 against 1.83.0 for beta-1.84.0-4 [INFO] extracting crate hpo 0.11.0 into /workspace/builds/worker-5-tc1/source [INFO] validating manifest of crates.io crate hpo 0.11.0 on toolchain 1.83.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.83.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate hpo 0.11.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate hpo 0.11.0 [INFO] tweaked toml for crates.io crate hpo 0.11.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] crate crates.io crate hpo 0.11.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.83.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+1.83.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c3818a8056466a8f6b0d291668ea3a00968b8bdd115a3be53306314610196fa1 [INFO] running `Command { std: "docker" "start" "-a" "c3818a8056466a8f6b0d291668ea3a00968b8bdd115a3be53306314610196fa1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c3818a8056466a8f6b0d291668ea3a00968b8bdd115a3be53306314610196fa1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c3818a8056466a8f6b0d291668ea3a00968b8bdd115a3be53306314610196fa1", kill_on_drop: false }` [INFO] [stdout] c3818a8056466a8f6b0d291668ea3a00968b8bdd115a3be53306314610196fa1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+1.83.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 54adb410c41123a92f3b8107e89cf8123ca77f5da4d11b47cb397180fc274b1b [INFO] running `Command { std: "docker" "start" "-a" "54adb410c41123a92f3b8107e89cf8123ca77f5da4d11b47cb397180fc274b1b", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.12 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling thiserror v1.0.63 [INFO] [stderr] Compiling pin-project-lite v0.2.14 [INFO] [stderr] Compiling tracing-core v0.1.32 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Compiling tracing-attributes v0.1.27 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Compiling tracing v0.1.40 [INFO] [stderr] Compiling hpo v0.11.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:391:44 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 391 | pub fn added_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(elided_named_lifetimes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:403:46 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 403 | pub fn removed_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:651:71 [INFO] [stdout] | [INFO] [stdout] 651 | pub fn omim_diseases_by_name<'a>(&'a self, substring: &'a str) -> OmimDiseaseFilter { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:742:58 [INFO] [stdout] | [INFO] [stdout] 742 | pub fn compare<'a>(&'a self, other: &'a Ontology) -> Comparison { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/stats/linkage.rs:16:40 [INFO] [stdout] | [INFO] [stdout] 15 | impl<'a> DistanceMatrix { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] 16 | fn iter(&'a self) -> hash_map::Iter<(usize, usize), f32> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 13.42s [INFO] running `Command { std: "docker" "inspect" "54adb410c41123a92f3b8107e89cf8123ca77f5da4d11b47cb397180fc274b1b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "54adb410c41123a92f3b8107e89cf8123ca77f5da4d11b47cb397180fc274b1b", kill_on_drop: false }` [INFO] [stdout] 54adb410c41123a92f3b8107e89cf8123ca77f5da4d11b47cb397180fc274b1b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+1.83.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 914ccd756321dc0d4735a1618d705a19ddab46bc51d7c86dc6d3a337c18da506 [INFO] running `Command { std: "docker" "start" "-a" "914ccd756321dc0d4735a1618d705a19ddab46bc51d7c86dc6d3a337c18da506", kill_on_drop: false }` [INFO] [stderr] Compiling autocfg v1.3.0 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling libc v0.2.158 [INFO] [stderr] Compiling serde v1.0.210 [INFO] [stderr] Compiling serde_derive v1.0.210 [INFO] [stderr] Compiling itoa v1.0.11 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling serde_json v1.0.128 [INFO] [stderr] Compiling plotters-backend v0.3.7 [INFO] [stderr] Compiling regex-syntax v0.8.4 [INFO] [stderr] Compiling ciborium-io v0.2.2 [INFO] [stderr] Compiling ryu v1.0.18 [INFO] [stderr] Compiling os_str_bytes v6.6.1 [INFO] [stderr] Compiling half v2.4.1 [INFO] [stderr] Compiling time-core v0.1.2 [INFO] [stderr] Compiling hashbrown v0.12.3 [INFO] [stderr] Compiling powerfmt v0.2.0 [INFO] [stderr] Compiling num-conv v0.1.0 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling time-macros v0.2.18 [INFO] [stderr] Compiling deranged v0.3.11 [INFO] [stderr] Compiling textwrap v0.16.1 [INFO] [stderr] Compiling cast v0.3.0 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling colored v2.1.0 [INFO] [stderr] Compiling oorandom v11.1.4 [INFO] [stderr] Compiling ciborium-ll v0.2.2 [INFO] [stderr] Compiling plotters-svg v0.3.7 [INFO] [stderr] Compiling anes v0.1.6 [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:391:44 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 391 | pub fn added_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(elided_named_lifetimes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:403:46 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 403 | pub fn removed_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:651:71 [INFO] [stdout] | [INFO] [stdout] 651 | pub fn omim_diseases_by_name<'a>(&'a self, substring: &'a str) -> OmimDiseaseFilter { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:742:58 [INFO] [stdout] | [INFO] [stdout] 742 | pub fn compare<'a>(&'a self, other: &'a Ontology) -> Comparison { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/stats/linkage.rs:16:40 [INFO] [stdout] | [INFO] [stdout] 15 | impl<'a> DistanceMatrix { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] 16 | fn iter(&'a self) -> hash_map::Iter<(usize, usize), f32> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling criterion-plot v0.5.0 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling crossbeam-deque v0.8.5 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling time v0.3.36 [INFO] [stderr] Compiling plotters v0.3.7 [INFO] [stderr] Compiling regex-automata v0.4.7 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling regex v1.10.6 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling criterion v0.4.0 [INFO] [stderr] Compiling hpo v0.11.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:391:44 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 391 | pub fn added_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(elided_named_lifetimes)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology/comparison.rs:403:46 [INFO] [stdout] | [INFO] [stdout] 331 | impl<'a> AnnotationDelta { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] ... [INFO] [stdout] 403 | pub fn removed_terms(&'a self) -> Option<&Vec> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:651:71 [INFO] [stdout] | [INFO] [stdout] 651 | pub fn omim_diseases_by_name<'a>(&'a self, substring: &'a str) -> OmimDiseaseFilter { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/ontology.rs:742:58 [INFO] [stdout] | [INFO] [stdout] 742 | pub fn compare<'a>(&'a self, other: &'a Ontology) -> Comparison { [INFO] [stdout] | -- lifetime `'a` declared here ^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: elided lifetime has a name [INFO] [stdout] --> src/stats/linkage.rs:16:40 [INFO] [stdout] | [INFO] [stdout] 15 | impl<'a> DistanceMatrix { [INFO] [stdout] | -- lifetime `'a` declared here [INFO] [stdout] 16 | fn iter(&'a self) -> hash_map::Iter<(usize, usize), f32> { [INFO] [stdout] | ^ this elided lifetime gets resolved as `'a` [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 36.88s [INFO] running `Command { std: "docker" "inspect" "914ccd756321dc0d4735a1618d705a19ddab46bc51d7c86dc6d3a337c18da506", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "914ccd756321dc0d4735a1618d705a19ddab46bc51d7c86dc6d3a337c18da506", kill_on_drop: false }` [INFO] [stdout] 914ccd756321dc0d4735a1618d705a19ddab46bc51d7c86dc6d3a337c18da506 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:f3a9d4ad9d972b27faf3965f35b62e55ba32bbce8f20bc8fe909558a86702fde" "/opt/rustwide/cargo-home/bin/cargo" "+1.83.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] d9b488b6a34987d1a6056198d90ae3823ee60c4874fb8365a0b38182c7cb4e00 [INFO] running `Command { std: "docker" "start" "-a" "d9b488b6a34987d1a6056198d90ae3823ee60c4874fb8365a0b38182c7cb4e00", kill_on_drop: false }` [INFO] [stderr] warning: elided lifetime has a name [INFO] [stderr] --> src/ontology/comparison.rs:391:44 [INFO] [stderr] | [INFO] [stderr] 331 | impl<'a> AnnotationDelta { [INFO] [stderr] | -- lifetime `'a` declared here [INFO] [stderr] ... [INFO] [stderr] 391 | pub fn added_terms(&'a self) -> Option<&Vec> { [INFO] [stderr] | ^ this elided lifetime gets resolved as `'a` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(elided_named_lifetimes)]` on by default [INFO] [stderr] [INFO] [stderr] warning: elided lifetime has a name [INFO] [stderr] --> src/ontology/comparison.rs:403:46 [INFO] [stderr] | [INFO] [stderr] 331 | impl<'a> AnnotationDelta { [INFO] [stderr] | -- lifetime `'a` declared here [INFO] [stderr] ... [INFO] [stderr] 403 | pub fn removed_terms(&'a self) -> Option<&Vec> { [INFO] [stderr] | ^ this elided lifetime gets resolved as `'a` [INFO] [stderr] [INFO] [stderr] warning: elided lifetime has a name [INFO] [stderr] --> src/ontology.rs:651:71 [INFO] [stderr] | [INFO] [stderr] 651 | pub fn omim_diseases_by_name<'a>(&'a self, substring: &'a str) -> OmimDiseaseFilter { [INFO] [stderr] | -- lifetime `'a` declared here ^^^^^^^^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stderr] [INFO] [stderr] warning: elided lifetime has a name [INFO] [stderr] --> src/ontology.rs:742:58 [INFO] [stderr] | [INFO] [stderr] 742 | pub fn compare<'a>(&'a self, other: &'a Ontology) -> Comparison { [INFO] [stderr] | -- lifetime `'a` declared here ^^^^^^^^^^ this elided lifetime gets resolved as `'a` [INFO] [stderr] [INFO] [stderr] warning: elided lifetime has a name [INFO] [stderr] --> src/stats/linkage.rs:16:40 [INFO] [stderr] | [INFO] [stderr] 15 | impl<'a> DistanceMatrix { [INFO] [stderr] | -- lifetime `'a` declared here [INFO] [stderr] 16 | fn iter(&'a self) -> hash_map::Iter<(usize, usize), f32> { [INFO] [stderr] | ^ this elided lifetime gets resolved as `'a` [INFO] [stderr] [INFO] [stderr] warning: `hpo` (lib) generated 5 warnings [INFO] [stderr] warning: `hpo` (lib test) generated 5 warnings (5 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hpo-a639a7cddfc6f122) [INFO] [stdout] [INFO] [stdout] running 84 tests [INFO] [stdout] test annotations::gene::test::gene_to_and_from_binary ... ok [INFO] [stdout] test annotations::gene::test::gene_with_long_name ... ok [INFO] [stdout] test annotations::gene::test::gene_with_wrong_length ... ok [INFO] [stdout] test annotations::omim_disease::test::disease_to_binary ... ok [INFO] [stdout] test annotations::omim_disease::test::disease_to_and_from_binary ... ok [INFO] [stdout] test annotations::omim_disease::test::disease_with_non_utf8_name ... ok [INFO] [stdout] test annotations::gene::test::gene_to_binary ... ok [INFO] [stdout] test matrix::tests::test_column_index_iterator ... ok [INFO] [stdout] test matrix::tests::test_column_iterator ... ok [INFO] [stdout] test matrix::tests::test_col_iterator_sums ... ok [INFO] [stdout] test matrix::tests::test_row_index_iterator ... ok [INFO] [stdout] test matrix::tests::test_row_iterator ... ok [INFO] [stdout] test matrix::tests::test_empty_row_iterator ... ok [INFO] [stdout] test annotations::gene::test::gene_with_non_utf8_name ... ok [INFO] [stdout] test matrix::tests::test_row_iterator_sums ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_comment ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_correct_orpha ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_hpo_id ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_omim_id ... ok [INFO] [stdout] test annotations::omim_disease::test::disease_with_long_name ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_input ... ok [INFO] [stdout] test annotations::omim_disease::test::disease_with_wrong_length ... ok [INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_fails ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_not ... ok [INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_hpo_id ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_hpo ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_orpha_not ... ok [INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_correct_omim ... ok [INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_ncbi_gene ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_correct_line_with_newline ... ok [INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_hashtag ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_symbol ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_correct_line_without_newline ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_missing_id ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_id ... ok [INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_invalid_hpo ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_correct_line_with_newline ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_correct_line_without_newline ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_empty_symbol ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_invalid_hpo ... ok [INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_missing_hpo ... ok [INFO] [stdout] test stats::hypergeom::statrs::test::min ... ok [INFO] [stdout] test stats::hypergeom::statrs::test::test_fcache ... ok [INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_build ... ok [INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_cdf ... ok [INFO] [stdout] test stats::test::iterate_frequencies ... ok [INFO] [stdout] test term::group::tests::test_bitand ... ok [INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_max ... ok [INFO] [stdout] test stats::test::iterate_counts ... ok [INFO] [stdout] test term::group::tests::test_bitand_2 ... ok [INFO] [stdout] test term::group::tests::test_bitor_set1 ... ok [INFO] [stdout] test term::group::tests::test_bitor_set4 ... ok [INFO] [stdout] test term::group::tests::test_hpogroup_iter ... ok [INFO] [stdout] test term::group::tests::test_bitor_set2 ... ok [INFO] [stdout] test term::group::tests::test_bitor_set3 ... ok [INFO] [stdout] test ontology::test::diseases_by_name ... ok [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/deps/hpo-a639a7cddfc6f122` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "d9b488b6a34987d1a6056198d90ae3823ee60c4874fb8365a0b38182c7cb4e00", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d9b488b6a34987d1a6056198d90ae3823ee60c4874fb8365a0b38182c7cb4e00", kill_on_drop: false }` [INFO] [stdout] d9b488b6a34987d1a6056198d90ae3823ee60c4874fb8365a0b38182c7cb4e00