[INFO] fetching crate bigwig2bam 0.1.4... [INFO] testing bigwig2bam-0.1.4 against beta-2024-10-19 for beta-1.83-1 [INFO] extracting crate bigwig2bam 0.1.4 into /workspace/builds/worker-2-tc2/source [INFO] validating manifest of crates.io crate bigwig2bam 0.1.4 on toolchain beta-2024-10-19 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-10-19" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate bigwig2bam 0.1.4 [INFO] finished tweaking crates.io crate bigwig2bam 0.1.4 [INFO] tweaked toml for crates.io crate bigwig2bam 0.1.4 written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate crates.io crate bigwig2bam 0.1.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-10-19" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-10-19" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3ddde4835d99dd8f3b42acf26bd77b343dc1995f958cb1f4d35a75a489d09f73 [INFO] running `Command { std: "docker" "start" "-a" "3ddde4835d99dd8f3b42acf26bd77b343dc1995f958cb1f4d35a75a489d09f73", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3ddde4835d99dd8f3b42acf26bd77b343dc1995f958cb1f4d35a75a489d09f73", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3ddde4835d99dd8f3b42acf26bd77b343dc1995f958cb1f4d35a75a489d09f73", kill_on_drop: false }` [INFO] [stdout] 3ddde4835d99dd8f3b42acf26bd77b343dc1995f958cb1f4d35a75a489d09f73 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-10-19" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] bc9208e6fb5dba1b69e156cb82f1f44559318814622993ac4deadc7c6d8dba94 [INFO] running `Command { std: "docker" "start" "-a" "bc9208e6fb5dba1b69e156cb82f1f44559318814622993ac4deadc7c6d8dba94", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.51 [INFO] [stderr] Compiling quote v1.0.23 [INFO] [stderr] Compiling unicode-ident v1.0.6 [INFO] [stderr] Compiling syn 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statrs v0.16.0 [INFO] [stderr] Compiling bio v1.1.0 [INFO] [stderr] Compiling bigwig2bam v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::rc::Rc` [INFO] [stdout] --> src/read.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::rc::Rc; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `cal_prefix` is never read [INFO] [stdout] --> src/bamgen.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 16 | pub struct Bam { [INFO] [stdout] | --- field in this struct [INFO] [stdout] ... [INFO] [stdout] 19 | cal_prefix: String, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `add_list_read` and `add_reads` are never used [INFO] [stdout] --> src/bamgen.rs:112:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl Bam { [INFO] [stdout] | -------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 112 | pub fn add_list_read(&mut self, reads: &Vec) { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 121 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `BamCache` is never constructed [INFO] [stdout] --> src/bamgen.rs:144:12 [INFO] [stdout] | [INFO] [stdout] 144 | pub struct BamCache { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated items `new`, `cache`, `flush_entry`, `flush`, `add_reads`, and `close` are never used [INFO] [stdout] --> src/bamgen.rs:157:12 [INFO] [stdout] | [INFO] [stdout] 149 | impl BamCache { [INFO] [stdout] | ------------- associated items in this implementation [INFO] [stdout] ... [INFO] [stdout] 157 | pub fn new(fasta: &str, bam_file: &str, cal_prefix: &str, thread: u16) -> BamCache { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 167 | fn cache(&mut self, read: Read) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 191 | fn flush_entry(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 204 | fn flush(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 220 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 231 | pub fn close(&mut self) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `chr_len` is never used [INFO] [stdout] --> src/bigwig.rs:88:12 [INFO] [stdout] | [INFO] [stdout] 17 | impl Coverage { [INFO] [stdout] | ------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 88 | pub fn chr_len(&self) -> u32 { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `next_pos` is never used [INFO] [stdout] --> src/bigwig.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 148 | impl Depths { [INFO] [stdout] | ----------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 176 | fn next_pos(&mut self) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `chr_pos` and `paired` are never read [INFO] [stdout] --> src/read.rs:28:5 [INFO] [stdout] | [INFO] [stdout] 23 | pub struct Fragments { [INFO] [stdout] | --------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 28 | chr_pos: u32, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 33 | paired: bool, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `get` and `get_seq` are never used [INFO] [stdout] --> src/read.rs:184:12 [INFO] [stdout] | [INFO] [stdout] 37 | impl Fragments { [INFO] [stdout] | -------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 184 | pub fn get(&mut self, chr_id: u32, chr_pos: u32) -> (Read, Read) { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 263 | fn get_seq(&self, chr_pos: u32, first: bool) -> &str { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated functions `empty` and `new` are never used [INFO] [stdout] --> src/read.rs:281:12 [INFO] [stdout] | [INFO] [stdout] 277 | impl Read { [INFO] [stdout] | --------- associated functions in this implementation [INFO] [stdout] ... [INFO] [stdout] 281 | pub fn empty() -> Read { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 345 | pub fn new( [INFO] [stdout] | ^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 20s [INFO] running `Command { std: "docker" "inspect" "bc9208e6fb5dba1b69e156cb82f1f44559318814622993ac4deadc7c6d8dba94", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bc9208e6fb5dba1b69e156cb82f1f44559318814622993ac4deadc7c6d8dba94", kill_on_drop: false }` [INFO] [stdout] bc9208e6fb5dba1b69e156cb82f1f44559318814622993ac4deadc7c6d8dba94 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-10-19" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e59046b22b63a984f643063d7d2b8c3c3aa5bcdc66792477cf446f6bac41d141 [INFO] running `Command { std: "docker" "start" "-a" "e59046b22b63a984f643063d7d2b8c3c3aa5bcdc66792477cf446f6bac41d141", kill_on_drop: false }` [INFO] [stderr] Compiling bigwig2bam v0.1.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::rc::Rc` [INFO] [stdout] --> src/read.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::rc::Rc; [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: field `cal_prefix` is never read [INFO] [stdout] --> src/bamgen.rs:19:5 [INFO] [stdout] | [INFO] [stdout] 16 | pub struct Bam { [INFO] [stdout] | --- field in this struct [INFO] [stdout] ... [INFO] [stdout] 19 | cal_prefix: String, [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `add_list_read` and `add_reads` are never used [INFO] [stdout] --> src/bamgen.rs:112:12 [INFO] [stdout] | [INFO] [stdout] 22 | impl Bam { [INFO] [stdout] | -------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 112 | pub fn add_list_read(&mut self, reads: &Vec) { [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 121 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `BamCache` is never constructed [INFO] [stdout] --> src/bamgen.rs:144:12 [INFO] [stdout] | [INFO] [stdout] 144 | pub struct BamCache { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated items `new`, `cache`, `flush_entry`, `flush`, `add_reads`, and `close` are never used [INFO] [stdout] --> src/bamgen.rs:157:12 [INFO] [stdout] | [INFO] [stdout] 149 | impl BamCache { [INFO] [stdout] | ------------- associated items in this implementation [INFO] [stdout] ... [INFO] [stdout] 157 | pub fn new(fasta: &str, bam_file: &str, cal_prefix: &str, thread: u16) -> BamCache { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 167 | fn cache(&mut self, read: Read) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 191 | fn flush_entry(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 204 | fn flush(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 220 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 231 | pub fn close(&mut self) { [INFO] [stdout] | ^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `chr_len` is never used [INFO] [stdout] --> src/bigwig.rs:88:12 [INFO] [stdout] | [INFO] [stdout] 17 | impl Coverage { [INFO] [stdout] | ------------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 88 | pub fn chr_len(&self) -> u32 { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `next_pos` is never used [INFO] [stdout] --> src/bigwig.rs:176:8 [INFO] [stdout] | [INFO] [stdout] 148 | impl Depths { [INFO] [stdout] | ----------- method in this implementation [INFO] [stdout] ... [INFO] [stdout] 176 | fn next_pos(&mut self) { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: fields `chr_pos` and `paired` are never read [INFO] [stdout] --> src/read.rs:28:5 [INFO] [stdout] | [INFO] [stdout] 23 | pub struct Fragments { [INFO] [stdout] | --------- fields in this struct [INFO] [stdout] ... [INFO] [stdout] 28 | chr_pos: u32, [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 33 | paired: bool, [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `get` and `get_seq` are never used [INFO] [stdout] --> src/read.rs:184:12 [INFO] [stdout] | [INFO] [stdout] 37 | impl Fragments { [INFO] [stdout] | -------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 184 | pub fn get(&mut self, chr_id: u32, chr_pos: u32) -> (Read, Read) { [INFO] [stdout] | ^^^ [INFO] [stdout] ... [INFO] [stdout] 263 | fn get_seq(&self, chr_pos: u32, first: bool) -> &str { [INFO] [stdout] | ^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: associated functions `empty` and `new` are never used [INFO] [stdout] --> src/read.rs:281:12 [INFO] [stdout] | [INFO] [stdout] 277 | impl Read { [INFO] [stdout] | --------- associated functions in this implementation [INFO] [stdout] ... [INFO] [stdout] 281 | pub fn empty() -> Read { [INFO] [stdout] | ^^^^^ [INFO] [stdout] ... [INFO] [stdout] 345 | pub fn new( [INFO] [stdout] | ^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.35s [INFO] running `Command { std: "docker" "inspect" "e59046b22b63a984f643063d7d2b8c3c3aa5bcdc66792477cf446f6bac41d141", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e59046b22b63a984f643063d7d2b8c3c3aa5bcdc66792477cf446f6bac41d141", kill_on_drop: false }` [INFO] [stdout] e59046b22b63a984f643063d7d2b8c3c3aa5bcdc66792477cf446f6bac41d141 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-10-19" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 37eae84c6e012186b647595d82b2bf73ca0b7fd3af894b5eeb642222f87fda63 [INFO] running `Command { std: "docker" "start" "-a" "37eae84c6e012186b647595d82b2bf73ca0b7fd3af894b5eeb642222f87fda63", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::rc::Rc` [INFO] [stderr] --> src/read.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use std::rc::Rc; [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: field `cal_prefix` is never read [INFO] [stderr] --> src/bamgen.rs:19:5 [INFO] [stderr] | [INFO] [stderr] 16 | pub struct Bam { [INFO] [stderr] | --- field in this struct [INFO] [stderr] ... [INFO] [stderr] 19 | cal_prefix: String, [INFO] [stderr] | ^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: methods `add_list_read` and `add_reads` are never used [INFO] [stderr] --> src/bamgen.rs:112:12 [INFO] [stderr] | [INFO] [stderr] 22 | impl Bam { [INFO] [stderr] | -------- methods in this implementation [INFO] [stderr] ... [INFO] [stderr] 112 | pub fn add_list_read(&mut self, reads: &Vec) { [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 121 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: struct `BamCache` is never constructed [INFO] [stderr] --> src/bamgen.rs:144:12 [INFO] [stderr] | [INFO] [stderr] 144 | pub struct BamCache { [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated items `new`, `cache`, `flush_entry`, `flush`, `add_reads`, and `close` are never used [INFO] [stderr] --> src/bamgen.rs:157:12 [INFO] [stderr] | [INFO] [stderr] 149 | impl BamCache { [INFO] [stderr] | ------------- associated items in this implementation [INFO] [stderr] ... [INFO] [stderr] 157 | pub fn new(fasta: &str, bam_file: &str, cal_prefix: &str, thread: u16) -> BamCache { [INFO] [stderr] | ^^^ [INFO] [stderr] ... [INFO] [stderr] 167 | fn cache(&mut self, read: Read) { [INFO] [stderr] | ^^^^^ [INFO] [stderr] ... [INFO] [stderr] 191 | fn flush_entry(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stderr] | ^^^^^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 204 | fn flush(&mut self, chr_id: u32, chr_pos: u32) { [INFO] [stderr] | ^^^^^ [INFO] [stderr] ... [INFO] [stderr] 220 | pub fn add_reads(&mut self, reads: (Read, Read)) { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 231 | pub fn close(&mut self) { [INFO] [stderr] | ^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method `chr_len` is never used [INFO] [stderr] --> src/bigwig.rs:88:12 [INFO] [stderr] | [INFO] [stderr] 17 | impl Coverage { [INFO] [stderr] | ------------- method in this implementation [INFO] [stderr] ... [INFO] [stderr] 88 | pub fn chr_len(&self) -> u32 { [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: method `next_pos` is never used [INFO] [stderr] --> src/bigwig.rs:176:8 [INFO] [stderr] | [INFO] [stderr] 148 | impl Depths { [INFO] [stderr] | ----------- method in this implementation [INFO] [stderr] ... [INFO] [stderr] 176 | fn next_pos(&mut self) { [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: fields `chr_pos` and `paired` are never read [INFO] [stderr] --> src/read.rs:28:5 [INFO] [stderr] | [INFO] [stderr] 23 | pub struct Fragments { [INFO] [stderr] | --------- fields in this struct [INFO] [stderr] ... [INFO] [stderr] 28 | chr_pos: u32, [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 33 | paired: bool, [INFO] [stderr] | ^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: methods `get` and `get_seq` are never used [INFO] [stderr] --> src/read.rs:184:12 [INFO] [stderr] | [INFO] [stderr] 37 | impl Fragments { [INFO] [stderr] | -------------- methods in this implementation [INFO] [stderr] ... [INFO] [stderr] 184 | pub fn get(&mut self, chr_id: u32, chr_pos: u32) -> (Read, Read) { [INFO] [stderr] | ^^^ [INFO] [stderr] ... [INFO] [stderr] 263 | fn get_seq(&self, chr_pos: u32, first: bool) -> &str { [INFO] [stderr] | ^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: associated functions `empty` and `new` are never used [INFO] [stderr] --> src/read.rs:281:12 [INFO] [stderr] | [INFO] [stderr] 277 | impl Read { [INFO] [stderr] | --------- associated functions in this implementation [INFO] [stderr] ... [INFO] [stderr] 281 | pub fn empty() -> Read { [INFO] [stderr] | ^^^^^ [INFO] [stderr] ... [INFO] [stderr] 345 | pub fn new( [INFO] [stderr] | ^^^ [INFO] [stderr] [INFO] [stderr] warning: `bigwig2bam` (bin "bigwig2bam" test) generated 10 warnings (run `cargo fix --bin "bigwig2bam" --tests` to apply 1 suggestion) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.17s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/bigwig2bam-cd6274047e79d836) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "37eae84c6e012186b647595d82b2bf73ca0b7fd3af894b5eeb642222f87fda63", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "37eae84c6e012186b647595d82b2bf73ca0b7fd3af894b5eeb642222f87fda63", kill_on_drop: false }` [INFO] [stdout] 37eae84c6e012186b647595d82b2bf73ca0b7fd3af894b5eeb642222f87fda63