[INFO] cloning repository https://github.com/IMTMarburg/mbf_bam [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/IMTMarburg/mbf_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 22cc70bbefa50c1df11b5ee376fe6d5d2560db07 [INFO] testing IMTMarburg/mbf_bam/22cc70bbefa50c1df11b5ee376fe6d5d2560db07 against 1.82.0 for beta-1.83-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FIMTMarburg%2Fmbf_bam" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/IMTMarburg/mbf_bam on toolchain 1.82.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.82.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] finished tweaking git repo https://github.com/IMTMarburg/mbf_bam [INFO] tweaked toml for git repo https://github.com/IMTMarburg/mbf_bam written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/IMTMarburg/mbf_bam already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.82.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded statrs v0.17.1 [INFO] [stderr] Downloaded ex v0.1.3 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded rust-htslib v0.46.0 [INFO] [stderr] Downloaded bio v2.0.3 [INFO] [stderr] Downloaded curl-sys v0.4.77+curl-8.10.1 [INFO] [stderr] Downloaded hts-sys v2.1.4 [INFO] [stderr] Downloaded openssl-src v300.3.2+3.3.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+1.82.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 6e7e984721de98ed6286733a0dfa894de039d899e7445793d71e1e29bfd5acad [INFO] running `Command { std: "docker" "start" "-a" "6e7e984721de98ed6286733a0dfa894de039d899e7445793d71e1e29bfd5acad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "6e7e984721de98ed6286733a0dfa894de039d899e7445793d71e1e29bfd5acad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6e7e984721de98ed6286733a0dfa894de039d899e7445793d71e1e29bfd5acad", kill_on_drop: false }` [INFO] [stdout] 6e7e984721de98ed6286733a0dfa894de039d899e7445793d71e1e29bfd5acad [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+1.82.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 13eeb5d45264d20f7f990b49ab3a0670cfd5de8288368fe96e944cd40b76743a [INFO] running `Command { std: "docker" "start" "-a" "13eeb5d45264d20f7f990b49ab3a0670cfd5de8288368fe96e944cd40b76743a", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.160 [INFO] [stderr] Compiling proc-macro2 v1.0.88 [INFO] [stderr] Compiling unicode-ident v1.0.13 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling pkg-config v0.3.31 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling target-lexicon v0.12.16 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Compiling serde v1.0.210 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling rustversion v1.0.18 [INFO] [stderr] Compiling bytemuck v1.19.0 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling safe_arch v0.7.2 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling thiserror v1.0.64 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling tinyvec v1.8.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling wide v0.7.28 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling pyo3-build-config v0.20.3 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling syn v2.0.79 [INFO] [stderr] Compiling glob v0.3.1 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling miniz_oxide v0.8.0 [INFO] [stderr] Compiling unicode-normalization v0.1.24 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling failure_derive v0.1.8 [INFO] [stderr] Compiling percent-encoding v2.3.1 [INFO] [stderr] Compiling unicode-bidi v0.3.17 [INFO] [stderr] Compiling hashbrown v0.15.0 [INFO] [stderr] Compiling anyhow v1.0.89 [INFO] [stderr] Compiling gimli v0.31.1 [INFO] [stderr] Compiling portable-atomic v1.9.0 [INFO] [stderr] Compiling smallvec v1.13.2 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling cc v1.1.30 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling regex-automata v0.4.8 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling simba v0.8.1 [INFO] [stderr] Compiling unicode-xid v0.2.6 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling indexmap v2.6.0 [INFO] [stderr] Compiling idna v0.5.0 [INFO] [stderr] Compiling form_urlencoded v1.2.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.5 [INFO] [stderr] Compiling object v0.36.5 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling rustc-demangle v0.1.24 [INFO] [stderr] Compiling pyo3-ffi v0.20.3 [INFO] [stderr] Compiling openssl-src v300.3.2+3.3.2 [INFO] [stderr] Compiling cmake v0.1.51 [INFO] [stderr] Compiling pyo3 v0.20.3 [INFO] [stderr] Compiling synstructure v0.12.6 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling itoa v1.0.11 [INFO] [stderr] Compiling ryu v1.0.18 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling url v2.5.2 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling addr2line v0.24.2 [INFO] [stderr] Compiling libz-sys v1.1.20 [INFO] [stderr] Compiling openssl-sys v0.9.104 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling curl-sys v0.4.77+curl-8.10.1 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling hts-sys v2.1.4 [INFO] [stderr] Compiling pyo3-macros-backend v0.20.3 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling regex v1.11.0 [INFO] [stderr] Compiling ordered-float v4.4.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling unindent v0.2.3 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling flate2 v1.0.34 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling ex v0.1.3 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling serde_derive v1.0.210 [INFO] [stderr] Compiling thiserror-impl v1.0.64 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling backtrace v0.3.74 [INFO] [stderr] Compiling pyo3-macros v0.20.3 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling failure v0.1.8 [INFO] [stderr] Compiling ppv-lite86 v0.2.20 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling nalgebra v0.32.6 [INFO] [stderr] Compiling multimap v0.10.0 [INFO] [stderr] Compiling csv v1.3.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling statrs v0.17.1 [INFO] [stderr] Compiling bio v2.0.3 [INFO] [stderr] Compiling rust-htslib v0.46.0 [INFO] [stderr] Compiling mbf_bam v0.6.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 46.94s [INFO] running `Command { std: "docker" "inspect" "13eeb5d45264d20f7f990b49ab3a0670cfd5de8288368fe96e944cd40b76743a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "13eeb5d45264d20f7f990b49ab3a0670cfd5de8288368fe96e944cd40b76743a", kill_on_drop: false }` [INFO] [stdout] 13eeb5d45264d20f7f990b49ab3a0670cfd5de8288368fe96e944cd40b76743a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+1.82.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9cfa993785609966bd0dafc46864a4d32cc1118822607822afbd81847f78d666 [INFO] running `Command { std: "docker" "start" "-a" "9cfa993785609966bd0dafc46864a4d32cc1118822607822afbd81847f78d666", kill_on_drop: false }` [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Compiling rustix v0.38.37 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling fastrand v2.1.1 [INFO] [stderr] Compiling pyo3-build-config v0.20.3 [INFO] [stderr] Compiling pyo3-macros-backend v0.20.3 [INFO] [stderr] Compiling pyo3-ffi v0.20.3 [INFO] [stderr] Compiling pyo3 v0.20.3 [INFO] [stderr] Compiling tempfile v3.13.0 [INFO] [stderr] Compiling pyo3-macros v0.20.3 [INFO] [stderr] Compiling mbf_bam v0.6.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 7.83s [INFO] running `Command { std: "docker" "inspect" "9cfa993785609966bd0dafc46864a4d32cc1118822607822afbd81847f78d666", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9cfa993785609966bd0dafc46864a4d32cc1118822607822afbd81847f78d666", kill_on_drop: false }` [INFO] [stdout] 9cfa993785609966bd0dafc46864a4d32cc1118822607822afbd81847f78d666 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4a844ea9eb2546a2d2c7022eacef16ef2e8229c7fbb2c7d4d55a9ceca922f72d" "/opt/rustwide/cargo-home/bin/cargo" "+1.82.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 40e294633a935353feee5a3443ccf066c43065949940c59bde476dd4b1fb3187 [INFO] running `Command { std: "docker" "start" "-a" "40e294633a935353feee5a3443ccf066c43065949940c59bde476dd4b1fb3187", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.10s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/mbf_bam-f633bfcadf269f5e) [INFO] [stdout] [INFO] [stdout] running 6 tests [INFO] [stdout] test bam_ext::tests::test_introns ... ok [INFO] [stdout] test bam_ext::tests::spliced_reads ... ok [INFO] [stderr] [E::hts_open_format] Failed to open file "test.bam" : Read-only file system [INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename_none ... ok [INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename ... ok [INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename_noop ... ok [INFO] [stdout] test bam_manipulation::tests::test_filter_and_rename2 ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- bam_manipulation::tests::test_filter_and_rename2 stdout ---- [INFO] [stdout] [src/bam_manipulation.rs:172:5] &new_header.clone().to_hashmap() = { [INFO] [stdout] "PG": [ [INFO] [stdout] { [INFO] [stdout] "ID": "P1", [INFO] [stdout] "VN": "1.0", [INFO] [stdout] }, [INFO] [stdout] { [INFO] [stdout] "ID": "P2", [INFO] [stdout] "VN": "1.1", [INFO] [stdout] }, [INFO] [stdout] { [INFO] [stdout] "ID": "mbf_bam.filter_and_rename_references", [INFO] [stdout] }, [INFO] [stdout] ], [INFO] [stdout] "RG": [ [INFO] [stdout] { [INFO] [stdout] "ID": "L1", [INFO] [stdout] "PU": "SC_1_10", [INFO] [stdout] "LB": "SC_1", [INFO] [stdout] "SM": "NA12891", [INFO] [stdout] "CN": "name:with:colon", [INFO] [stdout] }, [INFO] [stdout] { [INFO] [stdout] "ID": "L2", [INFO] [stdout] "PU": "SC_2_12", [INFO] [stdout] "LB": "SC_2", [INFO] [stdout] "SM": "NA12891", [INFO] [stdout] "CN": "name:with:colon", [INFO] [stdout] }, [INFO] [stdout] ], [INFO] [stdout] "HD": [ [INFO] [stdout] { [INFO] [stdout] "VN": "1.0", [INFO] [stdout] }, [INFO] [stdout] ], [INFO] [stdout] "SQ": [ [INFO] [stdout] { [INFO] [stdout] "SN": "2", [INFO] [stdout] "LN": "1584", [INFO] [stdout] }, [INFO] [stdout] ], [INFO] [stdout] } [INFO] [stdout] thread 'bam_manipulation::tests::test_filter_and_rename2' panicked at src/bam_manipulation.rs:338:92: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: UnknownError { msg: "BamOpen { target: \"test.bam\" }" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5e68634f9dca - std::backtrace_rs::backtrace::libunwind::trace::h99efb0985cae5d78 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/../../backtrace/src/backtrace/libunwind.rs:116:5 [INFO] [stdout] 1: 0x5e68634f9dca - std::backtrace_rs::backtrace::trace_unsynchronized::he2c1aa63b3f7fad8 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/../../backtrace/src/backtrace/mod.rs:66:5 [INFO] [stdout] 2: 0x5e68634f9dca - std::sys::backtrace::_print_fmt::h8a221d40f5e0f88b [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5e68634f9dca - ::fmt::h304520fd6a30aa07 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5e6863520bab - core::fmt::rt::Argument::fmt::h5da9c218ec984eaf [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/fmt/rt.rs:177:76 [INFO] [stdout] 5: 0x5e6863520bab - core::fmt::write::hf5713710ce10ff22 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/fmt/mod.rs:1178:21 [INFO] [stdout] 6: 0x5e68634f6e33 - std::io::Write::write_fmt::h786683024e26df0d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/io/mod.rs:1823:15 [INFO] [stdout] 7: 0x5e68634fb5d2 - std::sys::backtrace::BacktraceLock::print::hbcdbec4d97c91528 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 8: 0x5e68634fb5d2 - std::panicking::default_hook::{{closure}}::he1ad87607d0c11c5 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:266:22 [INFO] [stdout] 9: 0x5e68634fb113 - std::panicking::default_hook::h81c8cd2e7c59ee33 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:290:9 [INFO] [stdout] 10: 0x5e6862d9a629 - as core::ops::function::Fn>::call::h6ef31d9fe3b4da7d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/alloc/src/boxed.rs:2245:9 [INFO] [stdout] 11: 0x5e6862d9a629 - test::test_main::{{closure}}::h97736fed204a235d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:132:21 [INFO] [stdout] 12: 0x5e68634fbe92 - as core::ops::function::Fn>::call::h375ef7f99b271d16 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/alloc/src/boxed.rs:2245:9 [INFO] [stdout] 13: 0x5e68634fbe92 - std::panicking::rust_panic_with_hook::had2118629c312a4a [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:805:13 [INFO] [stdout] 14: 0x5e68634fbb47 - std::panicking::begin_panic_handler::{{closure}}::h7fa5985d111bafa2 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:671:13 [INFO] [stdout] 15: 0x5e68634fa2a9 - std::sys::backtrace::__rust_end_short_backtrace::h704d151dbefa09c5 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/backtrace.rs:170:18 [INFO] [stdout] 16: 0x5e68634fb7d4 - rust_begin_unwind [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:662:5 [INFO] [stdout] 17: 0x5e6862d2c293 - core::panicking::panic_fmt::h3eea515d05f7a35e [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/panicking.rs:74:14 [INFO] [stdout] 18: 0x5e6862d2c7e6 - core::result::unwrap_failed::h7c8d8bbbcf45dc13 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/result.rs:1677:5 [INFO] [stdout] 19: 0x5e6862d555fe - core::result::Result::unwrap::hca0441f63e76475b [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/result.rs:1102:23 [INFO] [stdout] 20: 0x5e6862d555fe - mbf_bam::bam_manipulation::tests::test_filter_and_rename2::h62e4b54aa1a8ef4f [INFO] [stdout] at /opt/rustwide/workdir/src/bam_manipulation.rs:338:10 [INFO] [stdout] 21: 0x5e6862d54fc7 - mbf_bam::bam_manipulation::tests::test_filter_and_rename2::{{closure}}::h239651be7402fc48 [INFO] [stdout] at /opt/rustwide/workdir/src/bam_manipulation.rs:324:33 [INFO] [stdout] 22: 0x5e6862d340a6 - core::ops::function::FnOnce::call_once::h155c78060ff9810b [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 23: 0x5e6862d9ef2b - core::ops::function::FnOnce::call_once::h8cb4701a559728b6 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x5e6862d9ef2b - test::__rust_begin_short_backtrace::hbd02dbd41797127f [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:620:18 [INFO] [stdout] 25: 0x5e6862d9e818 - test::run_test_in_process::{{closure}}::h9b9c40b959cf4b0a [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:643:60 [INFO] [stdout] 26: 0x5e6862d9e818 - as core::ops::function::FnOnce<()>>::call_once::h80ca0f237bf0daa4 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 27: 0x5e6862d9e818 - std::panicking::try::do_call::h74ee75d3e2d7ba36 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:554:40 [INFO] [stdout] 28: 0x5e6862d9e818 - std::panicking::try::h2ae7db1dc2a281fc [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:518:19 [INFO] [stdout] 29: 0x5e6862d9e818 - std::panic::catch_unwind::h25732d5472f1001d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panic.rs:345:14 [INFO] [stdout] 30: 0x5e6862d9e818 - test::run_test_in_process::h1e17135aacb29db6 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:643:27 [INFO] [stdout] 31: 0x5e6862d9e818 - test::run_test::{{closure}}::h65f9c94bff1a7861 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:564:43 [INFO] [stdout] 32: 0x5e6862d63be4 - test::run_test::{{closure}}::ha23ee43b6be2939d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/test/src/lib.rs:594:41 [INFO] [stdout] 33: 0x5e6862d63be4 - std::sys::backtrace::__rust_begin_short_backtrace::h160ed2f20abbd124 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/backtrace.rs:154:18 [INFO] [stdout] 34: 0x5e6862d67292 - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h076d93a5dd61b367 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/thread/mod.rs:522:17 [INFO] [stdout] 35: 0x5e6862d67292 - as core::ops::function::FnOnce<()>>::call_once::hb7dffecae4d2a0df [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 36: 0x5e6862d67292 - std::panicking::try::do_call::h425c243d1cd119a5 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:554:40 [INFO] [stdout] 37: 0x5e6862d67292 - std::panicking::try::h5ff57b1fa4d0634d [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panicking.rs:518:19 [INFO] [stdout] 38: 0x5e6862d67292 - std::panic::catch_unwind::h69dc0395c7d606c8 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/panic.rs:345:14 [INFO] [stdout] 39: 0x5e6862d67292 - std::thread::Builder::spawn_unchecked_::{{closure}}::hd987ad26725d6b64 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/thread/mod.rs:521:30 [INFO] [stdout] 40: 0x5e6862d67292 - core::ops::function::FnOnce::call_once{{vtable.shim}}::h262984108de629b4 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 41: 0x5e686350092b - as core::ops::function::FnOnce>::call_once::hd6eefa32c9acf934 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/alloc/src/boxed.rs:2231:9 [INFO] [stdout] 42: 0x5e686350092b - as core::ops::function::FnOnce>::call_once::h6bca3a1f077b8c81 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/alloc/src/boxed.rs:2231:9 [INFO] [stdout] 43: 0x5e686350092b - std::sys::pal::unix::thread::Thread::new::thread_start::hcdbd1049068002f4 [INFO] [stdout] at /rustc/f6e511eec7342f59a25f7c0534f1dbea00d01b14/library/std/src/sys/pal/unix/thread.rs:105:17 [INFO] [stdout] 44: 0x777f58e07ac3 - [INFO] [stdout] 45: 0x777f58e98a04 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] bam_manipulation::tests::test_filter_and_rename2 [INFO] [stdout] [INFO] [stdout] test result: FAILED. 5 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "40e294633a935353feee5a3443ccf066c43065949940c59bde476dd4b1fb3187", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "40e294633a935353feee5a3443ccf066c43065949940c59bde476dd4b1fb3187", kill_on_drop: false }` [INFO] [stdout] 40e294633a935353feee5a3443ccf066c43065949940c59bde476dd4b1fb3187