[INFO] fetching crate hpo 0.9.1...
[INFO] testing hpo-0.9.1 against 1.79.0 for beta-1.80-4
[INFO] extracting crate hpo 0.9.1 into /workspace/builds/worker-4-tc1/source
[INFO] validating manifest of crates.io crate hpo 0.9.1 on toolchain 1.79.0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] started tweaking crates.io crate hpo 0.9.1
[INFO] finished tweaking crates.io crate hpo 0.9.1
[INFO] tweaked toml for crates.io crate hpo 0.9.1 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] crate crates.io crate hpo 0.9.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded nalgebra-macros v0.1.0
[INFO] [stderr]   Downloaded num-complex v0.4.5
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[INFO] [stderr]   Downloaded half v2.4.0
[INFO] [stderr]   Downloaded textwrap v0.16.1
[INFO] [stderr]   Downloaded serde_json v1.0.115
[INFO] [stderr]   Downloaded nalgebra v0.29.0
[INFO] [stderr]   Downloaded criterion v0.4.0
[INFO] [stderr]   Downloaded wide v0.7.15
[INFO] [stderr]   Downloaded statrs v0.16.0
[INFO] [stderr]   Downloaded syn v2.0.55
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[INFO] [stderr]   Downloaded ciborium v0.2.2
[INFO] [stderr]   Downloaded simba v0.6.0
[INFO] [stderr]   Downloaded os_str_bytes v6.6.1
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[INFO] [stderr]   Downloaded aquamarine v0.5.0
[INFO] [stderr]   Downloaded oorandom v11.1.3
[INFO] [stderr]   Downloaded plotters-backend v0.3.5
[INFO] [stderr]   Downloaded colored v2.1.0
[INFO] [stderr]   Downloaded safe_arch v0.7.1
[INFO] [stderr]   Downloaded plotters-svg v0.3.5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] fe767a63fc0fe0a6e1fc81ecde85fc773f3b3bda307e596f9c1fb08bec5ae7b1
[INFO] running `Command { std: "docker" "start" "-a" "fe767a63fc0fe0a6e1fc81ecde85fc773f3b3bda307e596f9c1fb08bec5ae7b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "fe767a63fc0fe0a6e1fc81ecde85fc773f3b3bda307e596f9c1fb08bec5ae7b1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fe767a63fc0fe0a6e1fc81ecde85fc773f3b3bda307e596f9c1fb08bec5ae7b1", kill_on_drop: false }`
[INFO] [stdout] fe767a63fc0fe0a6e1fc81ecde85fc773f3b3bda307e596f9c1fb08bec5ae7b1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3d098401d11f7dca3904ca4e61da004f2a277797d664e9897d6901c4fbe1fc30
[INFO] running `Command { std: "docker" "start" "-a" "3d098401d11f7dca3904ca4e61da004f2a277797d664e9897d6901c4fbe1fc30", kill_on_drop: false }`
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[INFO] [stderr]    Compiling matrixmultiply v0.3.8
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[INFO] [stderr]    Compiling proc-macro-error-attr v1.0.4
[INFO] [stderr]    Compiling getrandom v0.2.12
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[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
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[INFO] [stderr]    Compiling num-complex v0.4.5
[INFO] [stderr]    Compiling num-integer v0.1.46
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[INFO] [stderr]    Compiling proc-macro-error v1.0.4
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.58
[INFO] [stderr]    Compiling tracing-attributes v0.1.27
[INFO] [stderr]    Compiling aquamarine v0.5.0
[INFO] [stderr]    Compiling tracing v0.1.40
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling hpo v0.9.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 38.00s
[INFO] running `Command { std: "docker" "inspect" "3d098401d11f7dca3904ca4e61da004f2a277797d664e9897d6901c4fbe1fc30", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3d098401d11f7dca3904ca4e61da004f2a277797d664e9897d6901c4fbe1fc30", kill_on_drop: false }`
[INFO] [stdout] 3d098401d11f7dca3904ca4e61da004f2a277797d664e9897d6901c4fbe1fc30
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] c495527f7f2d0ab4404a3b168e52709bf612bb7f320c537e796a23104bd4078a
[INFO] running `Command { std: "docker" "start" "-a" "c495527f7f2d0ab4404a3b168e52709bf612bb7f320c537e796a23104bd4078a", kill_on_drop: false }`
[INFO] [stderr]    Compiling crossbeam-utils v0.8.19
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling serde_json v1.0.115
[INFO] [stderr]    Compiling getrandom v0.2.12
[INFO] [stderr]    Compiling half v2.4.0
[INFO] [stderr]    Compiling plotters-backend v0.3.5
[INFO] [stderr]    Compiling serde_derive v1.0.197
[INFO] [stderr]    Compiling os_str_bytes v6.6.1
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling ciborium-io v0.2.2
[INFO] [stderr]    Compiling deranged v0.3.11
[INFO] [stderr]    Compiling time-macros v0.2.17
[INFO] [stderr]    Compiling textwrap v0.16.1
[INFO] [stderr]    Compiling cast v0.3.0
[INFO] [stderr]    Compiling same-file v1.0.6
[INFO] [stderr]    Compiling walkdir v2.5.0
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling criterion-plot v0.5.0
[INFO] [stderr]    Compiling aquamarine v0.5.0
[INFO] [stderr]    Compiling colored v2.1.0
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling plotters-svg v0.3.5
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling plotters v0.3.5
[INFO] [stderr]    Compiling oorandom v11.1.3
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling anes v0.1.6
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling clap v3.2.25
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[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling simple_logger v4.3.3
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling serde v1.0.197
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling criterion v0.4.0
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling hpo v0.9.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 36.16s
[INFO] running `Command { std: "docker" "inspect" "c495527f7f2d0ab4404a3b168e52709bf612bb7f320c537e796a23104bd4078a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c495527f7f2d0ab4404a3b168e52709bf612bb7f320c537e796a23104bd4078a", kill_on_drop: false }`
[INFO] [stdout] c495527f7f2d0ab4404a3b168e52709bf612bb7f320c537e796a23104bd4078a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] ce2eef1902934ef37742df54314ac69c1af475c4ef4670a3b3ecdf07e60925e1
[INFO] running `Command { std: "docker" "start" "-a" "ce2eef1902934ef37742df54314ac69c1af475c4ef4670a3b3ecdf07e60925e1", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.13s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hpo-3428c66e324c8e15)
[INFO] [stdout] 
[INFO] [stdout] running 55 tests
[INFO] [stdout] test annotations::omim_disease::test::disease_to_and_from_binary ... ok
[INFO] [stdout] test annotations::gene::test::gene_with_long_name ... ok
[INFO] [stdout] test annotations::gene::test::gene_with_wrong_length ... ok
[INFO] [stdout] test annotations::gene::test::gene_with_non_utf8_name ... ok
[INFO] [stdout] test annotations::gene::test::gene_to_and_from_binary ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_to_binary ... ok
[INFO] [stdout] test annotations::gene::test::gene_to_binary ... ok
[INFO] [stdout] test matrix::tests::test_column_index_iterator ... ok
[INFO] [stdout] test matrix::tests::test_column_iterator ... ok
[INFO] [stdout] test matrix::tests::test_empty_row_iterator ... ok
[INFO] [stdout] test matrix::tests::test_row_iterator ... ok
[INFO] [stdout] test matrix::tests::test_row_iterator_sums ... ok
[INFO] [stdout] test matrix::tests::test_row_index_iterator ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_long_name ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_wrong_length ... ok
[INFO] [stdout] test stats::test::iterate_counts ... ok
[INFO] [stdout] test stats::test::iterate_frequencies ... ok
[INFO] [stdout] test term::group::tests::test_bitand ... ok
[INFO] [stdout] test term::group::tests::test_bitand_2 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set1 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set2 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set3 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set4 ... ok
[INFO] [stdout] test term::group::tests::test_hpogroup_iter ... ok
[INFO] [stdout] test parser::phenotype_hpoa::test_omim_parsing::test_skip_not ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_non_utf8_name ... ok
[INFO] [stdout] test matrix::tests::test_col_iterator_sums ... ok
[INFO] [stdout] test ontology::test::add_parents_from_bytes ... ok
[INFO] [stdout] test ontology::test::graphiv ... ok
[INFO] [stdout] test parser::hp_obo::test::split_terms ... ok
[INFO] [stdout] test ontology::test::add_terms_from_bytes ... ok
[INFO] [stdout] test ontology::test::parse_hpo_version ... ok
[INFO] [stdout] test term::internal::test::from_bytes ... ok
[INFO] [stdout] test term::internal::test::from_multiple_bytes ... ok
[INFO] [stdout] test term::internal::test::to_bytes ... ok
[INFO] [stdout] test utils::test::combinations ... ok
[INFO] [stdout] test utils::test::combinations_empty ... ok
[INFO] [stdout] test utils::test::combinations_single ... ok
[INFO] [stdout] test utils::test::combinations_two ... ok
[INFO] [stdout] test utils::test::last_row ... ok
[INFO] [stdout] test term::hpoterm::test_categories::test_modifier_is_self ... ok
[INFO] [stdout] test set::test::test_with_replaced_obsolete ... ok
[INFO] [stdout] test ontology::test::diseases_by_name ... ok
[INFO] [stdout] test set::test::test_obsolete ... ok
[INFO] [stdout] test term::hpoterm::test_categories::test_modifier ... ok
[INFO] [stdout] test ontology::test::check_v2_parsing ... ok
[INFO] [stdout] test set::test::test ... ok
[INFO] [stdout] test term::hpoterm::test_categories::test_categories_is_self ... ok
[INFO] [stdout] test term::hpoterm::test_categories::test_categories ... ok
[INFO] [stdout] test set::test::test_replace_obsolete ... ok
[INFO] [stdout] test term::hpoterm::test_path_to_term::child_term ... ok
[INFO] [stdout] test term::hpoterm::test_path_to_term::same_term ... ok
[INFO] [stdout] test term::hpoterm::test_path_to_term::parent_term ... ok
[INFO] [stdout] test term::hpoterm::test_path_to_term::normal ... ok
[INFO] [stdout] test ontology::test::compare_v1_v2 ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 55 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests hpo
[INFO] [stdout] 
[INFO] [stdout] running 132 tests
[INFO] [stdout] test src/matrix.rs - matrix (line 14) - compile ... ok
[INFO] [stdout] test src/lib.rs - (line 56) - compile ... ok
[INFO] [stdout] test src/lib.rs - (line 64) - compile ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::new (line 61) ... ok
[INFO] [stdout] test src/lib.rs - (line 145) ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::len (line 74) ... ok
[INFO] [stdout] test src/lib.rs - (line 72) ... ok
[INFO] [stdout] test src/lib.rs - (line 116) ... ok
[INFO] [stdout] test src/lib.rs - (line 164) ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::dim (line 100) ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::is_empty (line 87) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::calculate_information_content (line 1514) ... ok
[INFO] [stdout] test src/annotations/gene.rs - annotations::gene::Gene::as_bytes (line 147) ... ok
[INFO] [stdout] test src/annotations/omim_disease.rs - annotations::omim_disease::OmimDisease::try_from (line 188) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::from_standard (line 392) - compile ... ok
[INFO] [stdout] test src/annotations/gene.rs - annotations::gene::Gene::try_from (line 214) ... ok
[INFO] [stdout] test src/annotations/omim_disease.rs - annotations::omim_disease::OmimDisease::as_bytes (line 123) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::add_gene (line 1290) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::from_standard_transitive (line 448) - compile ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology (line 35) ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::cols (line 138) ... ok
[INFO] [stdout] test src/matrix.rs - matrix::Matrix<'a,T>::rows (line 113) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::create_cache (line 1248) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::add_omim_disease (line 1335) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::add_parent (line 1215) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::from_bytes (line 561) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::from_binary (line 498) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::categories (line 1067) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::as_bytes (line 649) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::gene_by_name (line 784) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::gene (line 763) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::is_empty (line 715) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::insert_term (line 1190) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::link_omim_disease_term (line 1424) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::compare (line 899) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::hpos (line 745) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::genes (line 803) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::link_gene_term (line 1380) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::gene_mut (line 1461) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::hpo (line 730) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::information_content (line 573) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::omim_diseases_by_name (line 854) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::omim_disease (line 820) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::len (line 702) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::categories (line 523) ... ok
[INFO] [stdout] test src/ontology/comparison.rs - ontology::comparison (line 5) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::omim_disease_by_name (line 873) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::modifier (line 1130) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::omim_diseases (line 836) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::omim_disease_mut (line 1481) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::child_nodes (line 101) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet (line 29) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::gene_ids (line 461) ... ok
[INFO] [stdout] test src/ontology.rs - ontology::Ontology::sub_ontology (line 925) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::contains (line 687) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::iter (line 659) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::is_empty (line 165) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::len (line 142) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::remove_obsolete (line 262) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::Builtins::new (line 470) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::remove_modifier (line 184) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::similarity (line 612) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::new (line 75) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::without_modifier (line 214) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::omim_disease_ids (line 494) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::replace_obsolete (line 417) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::Builtins (line 407) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::without_obsolete (line 309) ... ok
[INFO] [stdout] test src/set.rs - set::HpoSet<'a>::with_replaced_obsolete (line 363) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::InformationCoefficient::new (line 253) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::GroupSimilarity<T,C>::new (line 358) ... ok
[INFO] [stdout] test src/similarity.rs - similarity (line 31) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Relevance::new (line 216) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Mutation::new (line 322) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::GroupSimilarity (line 310) ... ok
[INFO] [stdout] test src/similarity.rs - similarity (line 11) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Jc::new (line 169) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Lin::new (line 115) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::GraphIc::new (line 26) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::GroupSimilarity (line 268) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Distance::new (line 285) ... ok
[INFO] [stdout] test src/similarity/defaults.rs - similarity::defaults::Resnik::new (line 79) ... ok
[INFO] [stdout] test src/similarity.rs - similarity::Similarity (line 74) ... ok
[INFO] [stdout] test src/stats/hypergeom/disease.rs - stats::hypergeom::disease::disease_enrichment (line 12) ... ok
[INFO] [stdout] test src/stats/hypergeom.rs - stats::hypergeom (line 9) ... ok
[INFO] [stdout] test src/stats/linkage.rs - stats::linkage::Linkage<'a>::union (line 113) ... ok
[INFO] [stdout] test src/stats/linkage.rs - stats::linkage::Linkage (line 59) ... ok
[INFO] [stdout] test src/stats/linkage.rs - stats::linkage::Linkage<'a>::single (line 166) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_common_ancestor_ids (line 258) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_common_ancestor_ids (line 239) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_common_ancestors (line 453) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_parent_ids (line 157) ... ok
[INFO] [stdout] test src/stats/linkage.rs - stats::linkage::Linkage<'a>::indicies (line 281) ... ok
[INFO] [stdout] test src/stats/hypergeom.rs - stats::hypergeom (line 45) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_parents (line 173) ... ok
[INFO] [stdout] test src/stats/hypergeom/gene.rs - stats::hypergeom::gene::gene_enrichment (line 12) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_union_ancestor_ids (line 367) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_common_ancestors (line 473) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::child_of (line 797) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_union_ancestor_ids (line 348) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::categories (line 1033) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::distance_to_term (line 877) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_union_ancestors (line 561) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::common_ancestors (line 503) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::children (line 208) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::children_ids (line 192) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::all_union_ancestors (line 581) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::id (line 88) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::distance_to_ancestor (line 764) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::common_ancestor_ids (line 292) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::name (line 106) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::is_modifier (line 1002) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::common_ancestors (line 523) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::parent_ids (line 122) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::gene_ids (line 675) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::information_content (line 725) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::genes (line 657) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::omim_diseases (line 691) ... ok
[INFO] [stdout] test src/utils.rs - utils::Combinations (line 7) - compile ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::common_ancestor_ids (line 311) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::omim_disease_ids (line 709) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::path_to_term (line 905) ... ok
[INFO] [stdout] test src/term/hpotermid.rs - term::hpotermid::HpoTermId::from_u32 (line 37) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::parent_of (line 816) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::parents (line 138) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::similarity_score (line 743) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::union_ancestor_ids (line 415) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::path_to_ancestor (line 835) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::union_ancestors (line 631) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::union_ancestor_ids (line 396) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::try_new (line 49) ... ok
[INFO] [stdout] test src/term/hpoterm.rs - term::hpoterm::HpoTerm<'a>::union_ancestors (line 611) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 132 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 36.62s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "ce2eef1902934ef37742df54314ac69c1af475c4ef4670a3b3ecdf07e60925e1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ce2eef1902934ef37742df54314ac69c1af475c4ef4670a3b3ecdf07e60925e1", kill_on_drop: false }`
[INFO] [stdout] ce2eef1902934ef37742df54314ac69c1af475c4ef4670a3b3ecdf07e60925e1