[INFO] fetching crate gxf2chrom 0.1.0... [INFO] testing gxf2chrom-0.1.0 against 1.79.0 for beta-1.80-4 [INFO] extracting crate gxf2chrom 0.1.0 into /workspace/builds/worker-1-tc1/source [INFO] validating manifest of crates.io crate gxf2chrom 0.1.0 on toolchain 1.79.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking crates.io crate gxf2chrom 0.1.0 [INFO] finished tweaking crates.io crate gxf2chrom 0.1.0 [INFO] tweaked toml for crates.io crate gxf2chrom 0.1.0 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] crate crates.io crate gxf2chrom 0.1.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded allocator-api2 v0.2.16 [INFO] [stderr] Downloaded clap_lex v0.7.0 [INFO] [stderr] Downloaded strsim v0.11.0 [INFO] [stderr] Downloaded clap_derive v4.5.0 [INFO] [stderr] Downloaded anstream v0.6.13 [INFO] [stderr] Downloaded clap_builder v4.5.1 [INFO] [stderr] Downloaded rayon v1.9.0 [INFO] [stderr] Downloaded clap v4.5.1 [INFO] [stderr] Downloaded crc32fast v1.4.0 [INFO] [stderr] Downloaded flate2 v1.0.28 [INFO] [stderr] Downloaded zerocopy-derive v0.7.32 [INFO] [stderr] Downloaded zerocopy v0.7.32 [INFO] [stderr] Downloaded ahash v0.8.10 [INFO] [stderr] Downloaded rayon-core v1.12.1 [INFO] [stderr] Downloaded thiserror-impl v1.0.57 [INFO] [stderr] Downloaded thiserror v1.0.57 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 45e2d4b8ec3fed6d60125e67b633950f7ab90c050d955f420305063fe094531e [INFO] running `Command { std: "docker" "start" "-a" "45e2d4b8ec3fed6d60125e67b633950f7ab90c050d955f420305063fe094531e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "45e2d4b8ec3fed6d60125e67b633950f7ab90c050d955f420305063fe094531e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "45e2d4b8ec3fed6d60125e67b633950f7ab90c050d955f420305063fe094531e", kill_on_drop: false }` [INFO] [stdout] 45e2d4b8ec3fed6d60125e67b633950f7ab90c050d955f420305063fe094531e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4ef777d5c6e175205b695212b8b2185344396cd4c53f05ef7709b72dea09a5df [INFO] running `Command { std: "docker" "start" "-a" "4ef777d5c6e175205b695212b8b2185344396cd4c53f05ef7709b72dea09a5df", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.19 [INFO] [stderr] Compiling syn v2.0.52 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling version_check v0.9.4 [INFO] [stderr] Compiling serde v1.0.197 [INFO] [stderr] Compiling crc32fast v1.4.0 [INFO] [stderr] Compiling either v1.10.0 [INFO] [stderr] Compiling zerocopy v0.7.32 [INFO] [stderr] Compiling anstream v0.6.13 [INFO] [stderr] Compiling strsim v0.11.0 [INFO] [stderr] Compiling clap_lex v0.7.0 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling thiserror v1.0.57 [INFO] [stderr] Compiling time v0.3.34 [INFO] [stderr] Compiling miniz_oxide v0.7.2 [INFO] [stderr] Compiling log v0.4.21 [INFO] [stderr] Compiling allocator-api2 v0.2.16 [INFO] [stderr] Compiling ahash v0.8.10 [INFO] [stderr] Compiling clap_builder v4.5.1 [INFO] [stderr] Compiling flate2 v1.0.28 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling crossbeam-deque v0.8.5 [INFO] [stderr] Compiling rayon v1.9.0 [INFO] [stderr] Compiling thiserror-impl v1.0.57 [INFO] [stderr] Compiling clap_derive v4.5.0 [INFO] [stderr] Compiling hashbrown v0.14.3 [INFO] [stderr] Compiling clap v4.5.1 [INFO] [stderr] Compiling gxf2chrom v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 18.45s [INFO] running `Command { std: "docker" "inspect" "4ef777d5c6e175205b695212b8b2185344396cd4c53f05ef7709b72dea09a5df", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4ef777d5c6e175205b695212b8b2185344396cd4c53f05ef7709b72dea09a5df", kill_on_drop: false }` [INFO] [stdout] 4ef777d5c6e175205b695212b8b2185344396cd4c53f05ef7709b72dea09a5df [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f1baf3ac2d53722a5cc2b269cafb2ee5543809f52af8bb2c5c28d3462fcceb14 [INFO] running `Command { std: "docker" "start" "-a" "f1baf3ac2d53722a5cc2b269cafb2ee5543809f52af8bb2c5c28d3462fcceb14", kill_on_drop: false }` [INFO] [stderr] Compiling gxf2chrom v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.55s [INFO] running `Command { std: "docker" "inspect" "f1baf3ac2d53722a5cc2b269cafb2ee5543809f52af8bb2c5c28d3462fcceb14", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f1baf3ac2d53722a5cc2b269cafb2ee5543809f52af8bb2c5c28d3462fcceb14", kill_on_drop: false }` [INFO] [stdout] f1baf3ac2d53722a5cc2b269cafb2ee5543809f52af8bb2c5c28d3462fcceb14 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 111270b567eb390233be2aba0bc25dd827c9626fb5f19359ce87b93f57454fe0 [INFO] running `Command { std: "docker" "start" "-a" "111270b567eb390233be2aba0bc25dd827c9626fb5f19359ce87b93f57454fe0", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/gxf2chrom-ffb34092ab15a745) [INFO] [stdout] [INFO] [stdout] running 8 tests [INFO] [stdout] test attr::tests::get_gencode_pair_from_gene_line ... ok [INFO] [stdout] test attr::tests::parse_gff_line ... ok [INFO] [stdout] test attr::tests::invalid_attributes ... ok [INFO] [stdout] test attr::tests::valid_attributes ... ok [INFO] [stdout] test attr::tests::get_gencode_pair_from_exon_line ... ok [INFO] [stdout] test gxf::tests::test_empty_line ... ok [INFO] [stdout] test gxf::tests::test_record_gff ... ok [INFO] [stdout] test gxf::tests::test_record_gtf ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/gxf2chrom-0ebb5959c5778807) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests gxf2chrom [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "111270b567eb390233be2aba0bc25dd827c9626fb5f19359ce87b93f57454fe0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "111270b567eb390233be2aba0bc25dd827c9626fb5f19359ce87b93f57454fe0", kill_on_drop: false }` [INFO] [stdout] 111270b567eb390233be2aba0bc25dd827c9626fb5f19359ce87b93f57454fe0