[INFO] cloning repository https://github.com/sebschmi/verify-same-kmer-content [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sebschmi/verify-same-kmer-content" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsebschmi%2Fverify-same-kmer-content", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsebschmi%2Fverify-same-kmer-content'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c0b3f7b42063079cd4f9950d35062c67e507d313 [INFO] testing sebschmi/verify-same-kmer-content against 1.79.0 for beta-1.80-4 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsebschmi%2Fverify-same-kmer-content" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/sebschmi/verify-same-kmer-content on toolchain 1.79.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/sebschmi/verify-same-kmer-content [INFO] finished tweaking git repo https://github.com/sebschmi/verify-same-kmer-content [INFO] tweaked toml for git repo https://github.com/sebschmi/verify-same-kmer-content written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/sebschmi/verify-same-kmer-content already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.79.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0e65143dc12b3cfa65a2ccc268e3203fd90679d39e5eb5c6642a0232ed2c606e [INFO] running `Command { std: "docker" "start" "-a" "0e65143dc12b3cfa65a2ccc268e3203fd90679d39e5eb5c6642a0232ed2c606e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0e65143dc12b3cfa65a2ccc268e3203fd90679d39e5eb5c6642a0232ed2c606e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0e65143dc12b3cfa65a2ccc268e3203fd90679d39e5eb5c6642a0232ed2c606e", kill_on_drop: false }` [INFO] [stdout] 0e65143dc12b3cfa65a2ccc268e3203fd90679d39e5eb5c6642a0232ed2c606e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 983495b0eb4dde6514059e37f8ff9c589669e44cf1b646738cfdeea2c8e6aa13 [INFO] running `Command { std: "docker" "start" "-a" "983495b0eb4dde6514059e37f8ff9c589669e44cf1b646738cfdeea2c8e6aa13", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.69 [INFO] [stderr] Compiling libc v0.2.149 [INFO] [stderr] Compiling anstyle-query v1.0.0 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Compiling tap v1.0.1 [INFO] [stderr] Compiling num_threads v0.1.6 [INFO] [stderr] Compiling anstyle-parse v0.2.2 [INFO] [stderr] Compiling time-macros v0.2.15 [INFO] [stderr] Compiling funty v2.0.0 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling wyz v0.5.1 [INFO] [stderr] Compiling anstream v0.6.4 [INFO] [stderr] Compiling clap_builder v4.4.7 [INFO] [stderr] Compiling bitvec v1.0.1 [INFO] [stderr] Compiling quote v1.0.33 [INFO] [stderr] Compiling syn v2.0.38 [INFO] [stderr] Compiling time v0.3.30 [INFO] [stderr] Compiling simplelog v0.12.1 [INFO] [stderr] Compiling clap_derive v4.4.7 [INFO] [stderr] Compiling clap v4.4.7 [INFO] [stderr] Compiling verify-same-kmer-content v1.3.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 22.52s [INFO] running `Command { std: "docker" "inspect" "983495b0eb4dde6514059e37f8ff9c589669e44cf1b646738cfdeea2c8e6aa13", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "983495b0eb4dde6514059e37f8ff9c589669e44cf1b646738cfdeea2c8e6aa13", kill_on_drop: false }` [INFO] [stdout] 983495b0eb4dde6514059e37f8ff9c589669e44cf1b646738cfdeea2c8e6aa13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 972758168fda7150dc5146ace79823c031636c11ea2157a8ba9af9ce4f5ff5ef [INFO] running `Command { std: "docker" "start" "-a" "972758168fda7150dc5146ace79823c031636c11ea2157a8ba9af9ce4f5ff5ef", kill_on_drop: false }` [INFO] [stderr] Compiling verify-same-kmer-content v1.3.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.79s [INFO] running `Command { std: "docker" "inspect" "972758168fda7150dc5146ace79823c031636c11ea2157a8ba9af9ce4f5ff5ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "972758168fda7150dc5146ace79823c031636c11ea2157a8ba9af9ce4f5ff5ef", kill_on_drop: false }` [INFO] [stdout] 972758168fda7150dc5146ace79823c031636c11ea2157a8ba9af9ce4f5ff5ef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:dff56e7819e73ed36160586b3445e93eb0be776c16704aeeded9c3fb668b2384" "/opt/rustwide/cargo-home/bin/cargo" "+1.79.0" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 5972bd87c27ef82b2fc85da224fb3c9746be50a8ca4f8c3f88c0252a99b1db9a [INFO] running `Command { std: "docker" "start" "-a" "5972bd87c27ef82b2fc85da224fb3c9746be50a8ca4f8c3f88c0252a99b1db9a", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/verify_same_kmer_content-453244565d7d64ae) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test kmer::tests::test_k31_display ... ok [INFO] [stdout] 02:24:54 [INFO] Logging initialised successfully [INFO] [stdout] test kmer::tests::test_reverse_complement ... ok [INFO] [stdout] test kmer_iterator::tests::test_simple_fa ... ok [INFO] [stdout] 02:24:54 [INFO] Reading first input file [INFO] [stdout] 02:24:54 [INFO] Sorting kmers in first input file [INFO] [stdout] 02:24:54 [INFO] Removing duplicates from first input file [INFO] [stdout] 02:24:54 [DEBUG] (6) verify_same_kmer_content: Duplicate kmers: 0/5 (0%) [INFO] [stdout] 02:24:54 [INFO] Reading second input file [INFO] [stdout] 02:24:54 [INFO] Sorting kmers in second input file [INFO] [stdout] 02:24:54 [INFO] Removing duplicates from second input file [INFO] [stdout] 02:24:54 [DEBUG] (6) verify_same_kmer_content: Duplicate kmers: 0/5 (0%) [INFO] [stdout] 02:24:54 [INFO] Comparing kmer content [INFO] [stdout] 02:24:54 [INFO] Success! [INFO] [stdout] test tests::test_simple ... ok [INFO] [stdout] 02:24:54 [INFO] Reading first input file [INFO] [stdout] 02:24:54 [INFO] Sorting kmers in first input file [INFO] [stdout] 02:24:54 [INFO] Removing duplicates from first input file [INFO] [stdout] 02:24:54 [DEBUG] (5) verify_same_kmer_content: Duplicate kmers: 1/6 (0%) [INFO] [stdout] 02:24:54 [INFO] Reading second input file [INFO] [stdout] 02:24:54 [INFO] Sorting kmers in second input file [INFO] [stdout] 02:24:54 [INFO] Removing duplicates from second input file [INFO] [stdout] 02:24:54 [DEBUG] (5) verify_same_kmer_content: Duplicate kmers: 1/6 (0%) [INFO] [stdout] 02:24:54 [INFO] Comparing kmer content [INFO] [stdout] 02:24:54 [INFO] Success! [INFO] [stdout] test tests::test_self_complemental_node ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "5972bd87c27ef82b2fc85da224fb3c9746be50a8ca4f8c3f88c0252a99b1db9a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5972bd87c27ef82b2fc85da224fb3c9746be50a8ca4f8c3f88c0252a99b1db9a", kill_on_drop: false }` [INFO] [stdout] 5972bd87c27ef82b2fc85da224fb3c9746be50a8ca4f8c3f88c0252a99b1db9a