[INFO] cloning repository https://github.com/mal2017/tcq [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mal2017/tcq" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmal2017%2Ftcq", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmal2017%2Ftcq'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 8f1d6f947f2d7e33eec738ba82cec4875b4e4f4f [INFO] testing mal2017/tcq against 1.77.0 for beta-1.78-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmal2017%2Ftcq" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mal2017/tcq on toolchain 1.77.0 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.77.0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mal2017/tcq [INFO] finished tweaking git repo https://github.com/mal2017/tcq [INFO] tweaked toml for git repo https://github.com/mal2017/tcq written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] crate git repo https://github.com/mal2017/tcq already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+1.77.0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [ERROR] this task or one of its parent failed! [ERROR] no output for 300 seconds [ERROR] note: run with `RUST_BACKTRACE=1` to display a backtrace. [INFO] testing mal2017/tcq against beta-2024-03-24 for beta-1.78-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmal2017%2Ftcq" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mal2017/tcq on toolchain beta-2024-03-24 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-03-24" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mal2017/tcq [INFO] finished tweaking git repo https://github.com/mal2017/tcq [INFO] tweaked toml for git repo https://github.com/mal2017/tcq written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/mal2017/tcq already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-03-24" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/rust-bio/rust-htslib.git` [INFO] [stderr] Updating git submodule `https://github.com/samtools/htslib.git` [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] testing mal2017/tcq against beta-2024-03-24 for beta-1.78-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmal2017%2Ftcq" "/workspace/builds/worker-2-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc2/source'... [INFO] [stderr] done. [INFO] validating manifest of git repo https://github.com/mal2017/tcq on toolchain beta-2024-03-24 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-03-24" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] started tweaking git repo https://github.com/mal2017/tcq [INFO] finished tweaking git repo https://github.com/mal2017/tcq [INFO] tweaked toml for git repo https://github.com/mal2017/tcq written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] crate git repo https://github.com/mal2017/tcq already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+beta-2024-03-24" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded syn v0.15.33 [INFO] [stderr] Downloaded itertools v0.6.5 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded env_logger v0.6.1 [INFO] [stderr] Downloaded hashbrown v0.1.8 [INFO] [stderr] Downloaded criterion-plot v0.3.1 [INFO] [stderr] Downloaded tinytemplate v1.0.1 [INFO] [stderr] Downloaded libc v0.2.53 [INFO] [stderr] Downloaded criterion v0.2.11 [INFO] [stderr] Downloaded env_logger v0.5.13 [INFO] [stderr] Downloaded console v0.7.5 [INFO] [stderr] Downloaded ndarray v0.11.2 [INFO] [stderr] Downloaded clang-sys v0.28.0 [INFO] [stderr] Downloaded bindgen v0.49.0 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded indicatif v0.11.0 [INFO] [stderr] Downloaded bio-types v0.5.1 [INFO] [stderr] Downloaded libz-sys v1.0.25 [INFO] [stderr] Downloaded which v2.0.1 [INFO] [stderr] Downloaded csv-core v0.1.5 [INFO] [stderr] Downloaded proc-macro2 v0.4.29 [INFO] [stderr] Downloaded itertools v0.8.0 [INFO] [stderr] Downloaded rand_xoshiro v0.1.0 [INFO] [stderr] Downloaded csv v1.0.7 [INFO] [stderr] Downloaded cexpr v0.3.5 [INFO] [stderr] Downloaded bytecount v0.3.2 [INFO] [stderr] Downloaded fs-utils v1.1.0 [INFO] [stderr] Downloaded bv v0.10.0 [INFO] [stderr] Downloaded cc v1.0.36 [INFO] [stderr] Downloaded statrs v0.9.0 [INFO] [stderr] Downloaded bio v0.25.0 [INFO] [stderr] Downloaded lzma-sys v0.1.14 [INFO] [stderr] Downloaded bzip2-sys v0.1.7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-03-24" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 1a40c3ac37d308aee70f552979b18bfd783fc20b4f036e2c654b6ab1f32bfd5e [INFO] running `Command { std: "docker" "start" "-a" "1a40c3ac37d308aee70f552979b18bfd783fc20b4f036e2c654b6ab1f32bfd5e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "1a40c3ac37d308aee70f552979b18bfd783fc20b4f036e2c654b6ab1f32bfd5e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1a40c3ac37d308aee70f552979b18bfd783fc20b4f036e2c654b6ab1f32bfd5e", kill_on_drop: false }` [INFO] [stdout] 1a40c3ac37d308aee70f552979b18bfd783fc20b4f036e2c654b6ab1f32bfd5e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=warn" "-e" "RUSTDOCFLAGS=--cap-lints=warn" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:2788e3201cd34a07e3172128adcd8b3090168a8e3bcc40d7c032b9dda1df7d1c" "/opt/rustwide/cargo-home/bin/cargo" "+beta-2024-03-24" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 48191300336e74fd9a8ab88cab94a1a2c1a81e4f95f4e151baee03e92b45d6c2 [INFO] running `Command { std: "docker" "start" "-a" "48191300336e74fd9a8ab88cab94a1a2c1a81e4f95f4e151baee03e92b45d6c2", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.53 [INFO] [stderr] Compiling cc v1.0.36 [INFO] [stderr] Compiling proc-macro2 v0.4.29 [INFO] [stderr] Compiling memchr v2.2.0 [INFO] [stderr] Compiling syn v0.15.33 [INFO] [stderr] Compiling serde v1.0.90 [INFO] [stderr] Compiling num-traits v0.2.6 [INFO] [stderr] Compiling lazy_static v1.3.0 [INFO] [stderr] Compiling ucd-util v0.1.3 [INFO] [stderr] Compiling regex v1.1.6 [INFO] [stderr] Compiling utf8-ranges v1.0.2 [INFO] [stderr] Compiling cfg-if v0.1.7 [INFO] [stderr] Compiling rand_core v0.3.1 [INFO] [stderr] Compiling backtrace v0.3.15 [INFO] [stderr] Compiling unicode-width v0.1.5 [INFO] [stderr] Compiling glob v0.2.11 [INFO] [stderr] Compiling pkg-config v0.3.14 [INFO] [stderr] Compiling smallvec v0.6.9 [INFO] [stderr] Compiling regex-syntax v0.6.6 [INFO] [stderr] Compiling thread_local v0.3.6 [INFO] [stderr] Compiling nom v4.2.3 [INFO] [stderr] Compiling rand_pcg v0.1.2 [INFO] [stderr] Compiling rustc-demangle v0.1.14 [INFO] [stderr] Compiling log v0.4.6 [INFO] [stderr] Compiling humantime v1.2.0 [INFO] [stderr] Compiling termcolor v1.0.4 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling either v1.5.2 [INFO] [stderr] Compiling clang-sys v0.28.0 [INFO] [stderr] Compiling rand_chacha v0.1.1 [INFO] [stderr] Compiling textwrap v0.10.0 [INFO] [stderr] Compiling rand_isaac v0.1.1 [INFO] [stderr] Compiling rand_xorshift v0.1.1 [INFO] [stderr] Compiling rand_hc v0.1.0 [INFO] [stderr] Compiling matrixmultiply v0.1.15 [INFO] [stderr] Compiling bitflags v1.0.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bindgen v0.49.0 [INFO] [stderr] Compiling strsim v0.7.0 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling atty v0.2.11 [INFO] [stderr] Compiling quote v0.6.12 [INFO] [stderr] Compiling rand_os v0.1.3 [INFO] [stderr] Compiling hashbrown v0.1.8 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling num-complex v0.2.1 [INFO] [stderr] Compiling rand v0.6.5 [INFO] [stderr] Compiling ryu v0.2.7 [INFO] [stderr] Compiling aho-corasick v0.7.3 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling backtrace-sys v0.1.28 [INFO] [stderr] Compiling libloading v0.5.0 [INFO] [stderr] Compiling lzma-sys v0.1.14 [INFO] [stderr] Compiling libz-sys v1.0.25 [INFO] [stderr] Compiling bzip2-sys v0.1.7 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling rawpointer v0.1.0 [INFO] [stderr] Compiling bv v0.10.0 [INFO] [stderr] Compiling rand v0.4.6 [INFO] [stderr] Compiling itertools v0.7.11 [INFO] [stderr] Compiling unicode-normalization v0.1.8 [INFO] [stderr] Compiling fs-utils v1.1.0 [INFO] [stderr] Compiling ndarray v0.12.1 [INFO] [stderr] Compiling num-integer v0.1.39 [INFO] [stderr] Compiling csv-core v0.1.5 [INFO] [stderr] Compiling clicolors-control v1.0.0 [INFO] [stderr] Compiling cexpr v0.3.5 [INFO] [stderr] Compiling parking_lot_core v0.4.0 [INFO] [stderr] Compiling rand v0.3.23 [INFO] [stderr] Compiling termios v0.3.1 [INFO] [stderr] Compiling bio v0.25.0 [INFO] [stderr] Compiling bit-vec v0.5.1 [INFO] [stderr] Compiling parking_lot v0.7.1 [INFO] [stderr] Compiling ndarray v0.11.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bit-set v0.5.1 [INFO] [stderr] Compiling statrs v0.9.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling number_prefix v0.2.8 [INFO] [stderr] Compiling num-traits v0.1.43 [INFO] [stderr] Compiling ordered-float v1.0.2 [INFO] [stderr] Compiling failure v0.1.5 [INFO] [stderr] Compiling num-complex v0.1.43 [INFO] [stderr] Compiling approx v0.3.2 [INFO] [stderr] Compiling itertools v0.6.5 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling bytecount v0.3.2 [INFO] [stderr] Compiling idna v0.1.5 [INFO] [stderr] Compiling which v2.0.1 [INFO] [stderr] Compiling lazy_static v0.2.11 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling fnv v1.0.6 [INFO] [stderr] Compiling url v1.7.2 [INFO] [stderr] Compiling serde_derive v1.0.90 [INFO] [stderr] Compiling env_logger v0.6.1 [INFO] [stderr] Compiling console v0.7.5 [INFO] [stderr] Compiling env_logger v0.5.13 [INFO] [stderr] Compiling indicatif v0.11.0 [INFO] [stderr] Compiling vec_map v0.8.1 [INFO] [stderr] Compiling bio-types v0.5.1 [INFO] [stderr] Compiling csv v1.0.7 [INFO] [stderr] Compiling multimap v0.4.0 [INFO] [stderr] Compiling clap v2.32.0 [INFO] [stderr] Compiling rust-htslib v0.22.1-alpha.0 (https://github.com/rust-bio/rust-htslib.git?rev=6a93aa473077c08aa52be0c2a89f1ee9d1c27609#6a93aa47) [INFO] [stdout] error[E0277]: `htsFile__bindgen_ty_1` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:36931 [INFO] [stdout] | [INFO] [stdout] 3 | ... ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , ... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `htsFile__bindgen_ty_1` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `htsFile__bindgen_ty_1` [INFO] [stdout] = note: add `#[derive(Debug)]` to `htsFile__bindgen_ty_1` or manually `impl Debug for htsFile__bindgen_ty_1` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `htsFile__bindgen_ty_1` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0277]: `hts_opt__bindgen_ty_1` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:46699 [INFO] [stdout] | [INFO] [stdout] 3 | ... ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , ... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `hts_opt__bindgen_ty_1` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `hts_opt__bindgen_ty_1` [INFO] [stdout] = note: add `#[derive(Debug)]` to `hts_opt__bindgen_ty_1` or manually `impl Debug for hts_opt__bindgen_ty_1` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `hts_opt__bindgen_ty_1` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union htsFile__bindgen_ty_1 { pub bgzf : * mut BGZF , pub cram : * mut cram_fd , pub hfile : * mut hFILE , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_htsFile__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . bgzf as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( bgzf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . cram as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( cram ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . hfile as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( hfile ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFile ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile > ( ) , 96usize , concat ! ( "Size of: " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . lineno as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( lineno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . line as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( line ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_ as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_aux as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_aux ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fp as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fp ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . format as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( format ) ) ) ; } impl htsFile { # [ inline ] pub fn is_bin ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bin ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_write ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_write ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_be ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_be ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_bgzf ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bgzf ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 5usize , 27u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 5usize , 27u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( is_bin : u32 , is_write : u32 , is_be : u32 , is_cram : u32 , is_bgzf : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let is_bin : u32 = unsafe { :: std :: mem :: transmute ( is_bin ) } ; is_bin as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let is_write : u32 = unsafe { :: std :: mem :: transmute ( is_write ) } ; is_write as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_be : u32 = unsafe { :: std :: mem :: transmute ( is_be ) } ; is_be as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 1u8 , { let is_bgzf : u32 = unsafe { :: std :: mem :: transmute ( is_bgzf ) } ; is_bgzf as u64 } ) ; __bindgen_bitfield_unit . set ( 5usize , 27u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsThreadPool { pub pool : * mut hts_tpool , pub qsize : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_htsThreadPool ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsThreadPool > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsThreadPool > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . pool as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( pool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . qsize as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( qsize ) ) ) ; } pub const sam_fields_SAM_QNAME : sam_fields = 1 ; pub const sam_fields_SAM_FLAG : sam_fields = 2 ; pub const sam_fields_SAM_RNAME : sam_fields = 4 ; pub const sam_fields_SAM_POS : sam_fields = 8 ; pub const sam_fields_SAM_MAPQ : sam_fields = 16 ; pub const sam_fields_SAM_CIGAR : sam_fields = 32 ; pub const sam_fields_SAM_RNEXT : sam_fields = 64 ; pub const sam_fields_SAM_PNEXT : sam_fields = 128 ; pub const sam_fields_SAM_TLEN : sam_fields = 256 ; pub const sam_fields_SAM_SEQ : sam_fields = 512 ; pub const sam_fields_SAM_QUAL : sam_fields = 1024 ; pub const sam_fields_SAM_AUX : sam_fields = 2048 ; pub const sam_fields_SAM_RGAUX : sam_fields = 4096 ; pub type sam_fields = u32 ; pub const hts_fmt_option_CRAM_OPT_DECODE_MD : hts_fmt_option = 0 ; pub const hts_fmt_option_CRAM_OPT_PREFIX : hts_fmt_option = 1 ; pub const hts_fmt_option_CRAM_OPT_VERBOSITY : hts_fmt_option = 2 ; pub const hts_fmt_option_CRAM_OPT_SEQS_PER_SLICE : hts_fmt_option = 3 ; pub const hts_fmt_option_CRAM_OPT_SLICES_PER_CONTAINER : hts_fmt_option = 4 ; pub const hts_fmt_option_CRAM_OPT_RANGE : hts_fmt_option = 5 ; pub const hts_fmt_option_CRAM_OPT_VERSION : hts_fmt_option = 6 ; pub const hts_fmt_option_CRAM_OPT_EMBED_REF : hts_fmt_option = 7 ; pub const hts_fmt_option_CRAM_OPT_IGNORE_MD5 : hts_fmt_option = 8 ; pub const hts_fmt_option_CRAM_OPT_REFERENCE : hts_fmt_option = 9 ; pub const hts_fmt_option_CRAM_OPT_MULTI_SEQ_PER_SLICE : hts_fmt_option = 10 ; pub const hts_fmt_option_CRAM_OPT_NO_REF : hts_fmt_option = 11 ; pub const hts_fmt_option_CRAM_OPT_USE_BZIP2 : hts_fmt_option = 12 ; pub const hts_fmt_option_CRAM_OPT_SHARED_REF : hts_fmt_option = 13 ; pub const hts_fmt_option_CRAM_OPT_NTHREADS : hts_fmt_option = 14 ; pub const hts_fmt_option_CRAM_OPT_THREAD_POOL : hts_fmt_option = 15 ; pub const hts_fmt_option_CRAM_OPT_USE_LZMA : hts_fmt_option = 16 ; pub const hts_fmt_option_CRAM_OPT_USE_RANS : hts_fmt_option = 17 ; pub const hts_fmt_option_CRAM_OPT_REQUIRED_FIELDS : hts_fmt_option = 18 ; pub const hts_fmt_option_CRAM_OPT_LOSSY_NAMES : hts_fmt_option = 19 ; pub const hts_fmt_option_CRAM_OPT_BASES_PER_SLICE : hts_fmt_option = 20 ; pub const hts_fmt_option_CRAM_OPT_STORE_MD : hts_fmt_option = 21 ; pub const hts_fmt_option_CRAM_OPT_STORE_NM : hts_fmt_option = 22 ; pub const hts_fmt_option_HTS_OPT_COMPRESSION_LEVEL : hts_fmt_option = 100 ; pub const hts_fmt_option_HTS_OPT_NTHREADS : hts_fmt_option = 101 ; pub const hts_fmt_option_HTS_OPT_THREAD_POOL : hts_fmt_option = 102 ; pub const hts_fmt_option_HTS_OPT_CACHE_SIZE : hts_fmt_option = 103 ; pub const hts_fmt_option_HTS_OPT_BLOCK_SIZE : hts_fmt_option = 104 ; pub type hts_fmt_option = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0277]: `__atomic_wide_counter` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:103034 [INFO] [stdout] | [INFO] [stdout] 3 | ...) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_cond_s { pub __wseq : __atomic_wide_counter , pub __g1_start : __atomic... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `__atomic_wide_counter` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `__atomic_wide_counter` [INFO] [stdout] = note: add `#[derive(Debug)]` to `__atomic_wide_counter` or manually `impl Debug for __atomic_wide_counter` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `__atomic_wide_counter` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union htsFile__bindgen_ty_1 { pub bgzf : * mut BGZF , pub cram : * mut cram_fd , pub hfile : * mut hFILE , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_htsFile__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . bgzf as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( bgzf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . cram as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( cram ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . hfile as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( hfile ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFile ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile > ( ) , 96usize , concat ! ( "Size of: " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . lineno as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( lineno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . line as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( line ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_ as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_aux as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_aux ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fp as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fp ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . format as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( format ) ) ) ; } impl htsFile { # [ inline ] pub fn is_bin ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bin ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_write ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_write ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_be ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_be ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_bgzf ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bgzf ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 5usize , 27u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 5usize , 27u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( is_bin : u32 , is_write : u32 , is_be : u32 , is_cram : u32 , is_bgzf : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let is_bin : u32 = unsafe { :: std :: mem :: transmute ( is_bin ) } ; is_bin as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let is_write : u32 = unsafe { :: std :: mem :: transmute ( is_write ) } ; is_write as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_be : u32 = unsafe { :: std :: mem :: transmute ( is_be ) } ; is_be as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 1u8 , { let is_bgzf : u32 = unsafe { :: std :: mem :: transmute ( is_bgzf ) } ; is_bgzf as u64 } ) ; __bindgen_bitfield_unit . set ( 5usize , 27u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsThreadPool { pub pool : * mut hts_tpool , pub qsize : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_htsThreadPool ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsThreadPool > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsThreadPool > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . pool as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( pool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . qsize as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( qsize ) ) ) ; } pub const sam_fields_SAM_QNAME : sam_fields = 1 ; pub const sam_fields_SAM_FLAG : sam_fields = 2 ; pub const sam_fields_SAM_RNAME : sam_fields = 4 ; pub const sam_fields_SAM_POS : sam_fields = 8 ; pub const sam_fields_SAM_MAPQ : sam_fields = 16 ; pub const sam_fields_SAM_CIGAR : sam_fields = 32 ; pub const sam_fields_SAM_RNEXT : sam_fields = 64 ; pub const sam_fields_SAM_PNEXT : sam_fields = 128 ; pub const sam_fields_SAM_TLEN : sam_fields = 256 ; pub const sam_fields_SAM_SEQ : sam_fields = 512 ; pub const sam_fields_SAM_QUAL : sam_fields = 1024 ; pub const sam_fields_SAM_AUX : sam_fields = 2048 ; pub const sam_fields_SAM_RGAUX : sam_fields = 4096 ; pub type sam_fields = u32 ; pub const hts_fmt_option_CRAM_OPT_DECODE_MD : hts_fmt_option = 0 ; pub const hts_fmt_option_CRAM_OPT_PREFIX : hts_fmt_option = 1 ; pub const hts_fmt_option_CRAM_OPT_VERBOSITY : hts_fmt_option = 2 ; pub const hts_fmt_option_CRAM_OPT_SEQS_PER_SLICE : hts_fmt_option = 3 ; pub const hts_fmt_option_CRAM_OPT_SLICES_PER_CONTAINER : hts_fmt_option = 4 ; pub const hts_fmt_option_CRAM_OPT_RANGE : hts_fmt_option = 5 ; pub const hts_fmt_option_CRAM_OPT_VERSION : hts_fmt_option = 6 ; pub const hts_fmt_option_CRAM_OPT_EMBED_REF : hts_fmt_option = 7 ; pub const hts_fmt_option_CRAM_OPT_IGNORE_MD5 : hts_fmt_option = 8 ; pub const hts_fmt_option_CRAM_OPT_REFERENCE : hts_fmt_option = 9 ; pub const hts_fmt_option_CRAM_OPT_MULTI_SEQ_PER_SLICE : hts_fmt_option = 10 ; pub const hts_fmt_option_CRAM_OPT_NO_REF : hts_fmt_option = 11 ; pub const hts_fmt_option_CRAM_OPT_USE_BZIP2 : hts_fmt_option = 12 ; pub const hts_fmt_option_CRAM_OPT_SHARED_REF : hts_fmt_option = 13 ; pub const hts_fmt_option_CRAM_OPT_NTHREADS : hts_fmt_option = 14 ; pub const hts_fmt_option_CRAM_OPT_THREAD_POOL : hts_fmt_option = 15 ; pub const hts_fmt_option_CRAM_OPT_USE_LZMA : hts_fmt_option = 16 ; pub const hts_fmt_option_CRAM_OPT_USE_RANS : hts_fmt_option = 17 ; pub const hts_fmt_option_CRAM_OPT_REQUIRED_FIELDS : hts_fmt_option = 18 ; pub const hts_fmt_option_CRAM_OPT_LOSSY_NAMES : hts_fmt_option = 19 ; pub const hts_fmt_option_CRAM_OPT_BASES_PER_SLICE : hts_fmt_option = 20 ; pub const hts_fmt_option_CRAM_OPT_STORE_MD : hts_fmt_option = 21 ; pub const hts_fmt_option_CRAM_OPT_STORE_NM : hts_fmt_option = 22 ; pub const hts_fmt_option_HTS_OPT_COMPRESSION_LEVEL : hts_fmt_option = 100 ; pub const hts_fmt_option_HTS_OPT_NTHREADS : hts_fmt_option = 101 ; pub const hts_fmt_option_HTS_OPT_THREAD_POOL : hts_fmt_option = 102 ; pub const hts_fmt_option_HTS_OPT_CACHE_SIZE : hts_fmt_option = 103 ; pub const hts_fmt_option_HTS_OPT_BLOCK_SIZE : hts_fmt_option = 104 ; pub type hts_fmt_option = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union hts_opt__bindgen_ty_1 { pub i : :: std :: os :: raw :: c_int , pub s : * mut :: std :: os :: raw :: c_char , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_hts_opt__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . i as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . s as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( s ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_opt ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . arg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( arg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . opt as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . val as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( val ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . next as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( next ) ) ) ; } extern "C" { pub fn hts_opt_add ( opts : * mut * mut hts_opt , c_arg : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_apply ( fp : * mut htsFile , opts : * mut hts_opt ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_free ( opts : * mut hts_opt ) ; } extern "C" { pub fn hts_parse_format ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_parse_opt_list ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}seq_nt16_table" ] pub static mut seq_nt16_table : [ :: std :: os :: raw :: c_uchar ; 256usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_str" ] pub static mut seq_nt16_str : [ :: std :: os :: raw :: c_char ; 0usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_int" ] pub static mut seq_nt16_int : [ :: std :: os :: raw :: c_int ; 0usize ] ; } extern "C" { pub fn hts_version ( ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_detect_format ( fp : * mut hFILE , fmt : * mut htsFormat ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_format_description ( format : * const htsFormat ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_open ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_open_format ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char , fmt : * const htsFormat ) -> * mut htsFile ; } extern "C" { pub fn hts_hopen ( fp : * mut hFILE , fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_close ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_get_format ( fp : * mut htsFile ) -> * const htsFormat ; } extern "C" { pub fn hts_format_file_extension ( format : * const htsFormat ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_opt ( fp : * mut htsFile , opt : hts_fmt_option , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_getline ( fp : * mut htsFile , delimiter : :: std :: os :: raw :: c_int , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_readlines ( fn_ : * const :: std :: os :: raw :: c_char , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_readlist ( fn_ : * const :: std :: os :: raw :: c_char , is_file : :: std :: os :: raw :: c_int , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_threads ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_thread_pool ( fp : * mut htsFile , p : * mut htsThreadPool ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_cache_size ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_set_fai_filename ( fp : * mut htsFile , fn_aux : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_check_EOF ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __hts_idx_t { _unused : [ u8 ; 0 ] , } pub type hts_idx_t = __hts_idx_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair32_t { pub beg : u32 , pub end : u32 , } # [ test ] fn bindgen_test_layout_hts_pair32_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair32_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair32_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . beg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . end as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( end ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_t { pub u : u64 , pub v : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( v ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_max_t { pub u : u64 , pub v : u64 , pub max : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_max_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_max_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_max_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( v ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . max as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( max ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_reglist_t { pub reg : * const :: std :: os :: raw :: c_char , pub tid : :: std :: os :: raw :: c_int , pub intervals : * mut hts_pair32_t , pub count : u32 , pub min_beg : u32 , pub max_end : u32 , } # [ test ] fn bindgen_test_layout_hts_reglist_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_reglist_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_reglist_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . reg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . tid as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . intervals as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( intervals ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . count as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . min_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( min_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . max_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( max_end ) ) ) ; } pub type hts_readrec_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut BGZF , data : * mut :: std :: os :: raw :: c_void , r : * mut :: std :: os :: raw :: c_void , tid : * mut :: std :: os :: raw :: c_int , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_seek_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void , offset : i64 , where_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_tell_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void ) -> i64 > ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub tid : :: std :: os :: raw :: c_int , pub beg : :: std :: os :: raw :: c_int , pub end : :: std :: os :: raw :: c_int , pub n_off : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub off : * mut hts_pair64_t , pub readrec : hts_readrec_func , pub bins : hts_itr_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t__bindgen_ty_1 { pub n : :: std :: os :: raw :: c_int , pub m : :: std :: os :: raw :: c_int , pub a : * mut :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_hts_itr_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . m as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . a as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( a ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_itr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t > ( ) , 80usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . tid as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . beg as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . end as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . n_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_off as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . readrec as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . bins as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( bins ) ) ) ; } impl hts_itr_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 29u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 29u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 29u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct aux_key_t { pub key : :: std :: os :: raw :: c_int , pub min_off : u64 , pub max_off : u64 , } # [ test ] fn bindgen_test_layout_aux_key_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < aux_key_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < aux_key_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . min_off as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( min_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . max_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( max_off ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_multi_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub reg_list : * mut hts_reglist_t , pub n_reg : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_intv : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_reg : :: std :: os :: raw :: c_int , pub off : * mut hts_pair64_max_t , pub n_off : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub nocoor_off : u64 , pub readrec : hts_readrec_func , pub seek : hts_seek_func , pub tell : hts_tell_func , } # [ test ] fn bindgen_test_layout_hts_itr_multi_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_multi_t > ( ) , 104usize , concat ! ( "Size of: " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_multi_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . reg_list as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( reg_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_reg as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_intv as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_intv ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_beg as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_end as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_reg as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_off as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_off as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . nocoor_off as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( nocoor_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . readrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . seek as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( seek ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . tell as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( tell ) ) ) ; } impl hts_itr_multi_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn nocoor ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_nocoor ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 28u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 28u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , nocoor : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let nocoor : u32 = unsafe { :: std :: mem :: transmute ( nocoor ) } ; nocoor as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 28u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } extern "C" { pub fn hts_idx_init ( n : :: std :: os :: raw :: c_int , fmt : :: std :: os :: raw :: c_int , offset0 : u64 , min_shift : :: std :: os :: raw :: c_int , n_lvls : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_destroy ( idx : * mut hts_idx_t ) ; } extern "C" { pub fn hts_idx_push ( idx : * mut hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , offset : u64 , is_mapped : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_finish ( idx : * mut hts_idx_t , final_offset : u64 ) ; } extern "C" { pub fn hts_idx_save ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_save_as ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_load ( fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_load2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_get_meta ( idx : * mut hts_idx_t , l_meta : * mut u32 ) -> * mut u8 ; } extern "C" { pub fn hts_idx_set_meta ( idx : * mut hts_idx_t , l_meta : u32 , meta : * mut u8 , is_copy : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_stat ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , mapped : * mut u64 , unmapped : * mut u64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_n_no_coor ( idx : * const hts_idx_t ) -> u64 ; } extern "C" { pub fn hts_parse_decimal ( str : * const :: std :: os :: raw :: c_char , strend : * mut * mut :: std :: os :: raw :: c_char , flags : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn hts_parse_reg ( str : * const :: std :: os :: raw :: c_char , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_itr_query ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_destroy ( iter : * mut hts_itr_t ) ; } pub type hts_name2id_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int > ; pub type hts_id2name_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char > ; pub type hts_itr_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t > ; extern "C" { pub fn hts_itr_querys ( idx : * const hts_idx_t , reg : * const :: std :: os :: raw :: c_char , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_query : hts_itr_query_func , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_next ( fp : * mut BGZF , iter : * mut hts_itr_t , r : * mut :: std :: os :: raw :: c_void , data : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_seqnames ( idx : * const hts_idx_t , n : * mut :: std :: os :: raw :: c_int , getid : hts_id2name_f , hdr : * mut :: std :: os :: raw :: c_void ) -> * mut * const :: std :: os :: raw :: c_char ; } pub type hts_itr_multi_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , itr : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t > ; extern "C" { pub fn hts_itr_multi_bam ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_cram ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_regions ( idx : * const hts_idx_t , reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_specific : hts_itr_multi_query_func , readrec : hts_readrec_func , seek : hts_seek_func , tell : hts_tell_func ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_next ( fd : * mut htsFile , iter : * mut hts_itr_multi_t , r : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_reglist_free ( reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_itr_multi_destroy ( iter : * mut hts_itr_multi_t ) ; } extern "C" { pub fn hts_file_type ( fname : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct errmod_t { _unused : [ u8 ; 0 ] , } extern "C" { pub fn errmod_init ( depcorr : f64 ) -> * mut errmod_t ; } extern "C" { pub fn errmod_destroy ( em : * mut errmod_t ) ; } extern "C" { pub fn errmod_cal ( em : * const errmod_t , n : :: std :: os :: raw :: c_int , m : :: std :: os :: raw :: c_int , bases : * mut u16 , q : * mut f32 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct probaln_par_t { pub d : f32 , pub e : f32 , pub bw : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_probaln_par_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < probaln_par_t > ( ) , 12usize , concat ! ( "Size of: " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < probaln_par_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . d as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( d ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . e as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( e ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . bw as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( bw ) ) ) ; } extern "C" { pub fn probaln_glocal ( ref_ : * const u8 , l_ref : :: std :: os :: raw :: c_int , query : * const u8 , l_query : :: std :: os :: raw :: c_int , iqual : * const u8 , c : * const probaln_par_t , state : * mut :: std :: os :: raw :: c_int , q : * mut u8 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_md5_context { _unused : [ u8 ; 0 ] , } extern "C" { pub fn hts_md5_init ( ) -> * mut hts_md5_context ; } extern "C" { pub fn hts_md5_update ( ctx : * mut hts_md5_context , data : * const :: std :: os :: raw :: c_void , size : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn hts_md5_final ( digest : * mut :: std :: os :: raw :: c_uchar , ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_reset ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_hex ( hex : * mut :: std :: os :: raw :: c_char , digest : * const :: std :: os :: raw :: c_uchar ) ; } extern "C" { pub fn hts_md5_destroy ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn __assert_fail ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert_perror_fail ( __errnum : :: std :: os :: raw :: c_int , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_int ) ; } pub type _Float32 = f32 ; pub type _Float64 = f64 ; pub type _Float32x = f64 ; pub type _Float64x = u128 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct div_t { pub quot : :: std :: os :: raw :: c_int , pub rem : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_div_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < div_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( div_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < div_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( div_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . rem as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ldiv_t { pub quot : :: std :: os :: raw :: c_long , pub rem : :: std :: os :: raw :: c_long , } # [ test ] fn bindgen_test_layout_ldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct lldiv_t { pub quot : :: std :: os :: raw :: c_longlong , pub rem : :: std :: os :: raw :: c_longlong , } # [ test ] fn bindgen_test_layout_lldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < lldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < lldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } extern "C" { pub fn __ctype_get_mb_cur_max ( ) -> usize ; } extern "C" { pub fn atof ( __nptr : * const :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn atoi ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn atol ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn atoll ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtod ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn strtof ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f32 ; } extern "C" { pub fn strtold ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> u128 ; } extern "C" { pub fn strtol ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn strtoul ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strtoq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtouq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn strtoll ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtoull ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn l64a ( __n : :: std :: os :: raw :: c_long ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn a64l ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } pub type u_char = __u_char ; pub type u_short = __u_short ; pub type u_int = __u_int ; pub type u_long = __u_long ; pub type quad_t = __quad_t ; pub type u_quad_t = __u_quad_t ; pub type fsid_t = __fsid_t ; pub type loff_t = __loff_t ; pub type ino_t = __ino_t ; pub type dev_t = __dev_t ; pub type gid_t = __gid_t ; pub type mode_t = __mode_t ; pub type nlink_t = __nlink_t ; pub type uid_t = __uid_t ; pub type off_t = __off_t ; pub type pid_t = __pid_t ; pub type id_t = __id_t ; pub type daddr_t = __daddr_t ; pub type caddr_t = __caddr_t ; pub type key_t = __key_t ; pub type clock_t = __clock_t ; pub type clockid_t = __clockid_t ; pub type time_t = __time_t ; pub type timer_t = __timer_t ; pub type ulong = :: std :: os :: raw :: c_ulong ; pub type ushort = :: std :: os :: raw :: c_ushort ; pub type uint = :: std :: os :: raw :: c_uint ; pub type u_int8_t = __uint8_t ; pub type u_int16_t = __uint16_t ; pub type u_int32_t = __uint32_t ; pub type u_int64_t = __uint64_t ; pub type register_t = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __sigset_t { pub __val : [ :: std :: os :: raw :: c_ulong ; 16usize ] , } # [ test ] fn bindgen_test_layout___sigset_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __sigset_t > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __sigset_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __sigset_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __sigset_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type sigset_t = __sigset_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timeval { pub tv_sec : __time_t , pub tv_usec : __suseconds_t , } # [ test ] fn bindgen_test_layout_timeval ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timeval > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timeval ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timeval > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timeval ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_usec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_usec ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timespec { pub tv_sec : __time_t , pub tv_nsec : __syscall_slong_t , } # [ test ] fn bindgen_test_layout_timespec ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timespec > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timespec ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timespec > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timespec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_nsec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_nsec ) ) ) ; } pub type suseconds_t = __suseconds_t ; pub type __fd_mask = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct fd_set { pub __fds_bits : [ __fd_mask ; 16usize ] , } # [ test ] fn bindgen_test_layout_fd_set ( ) { assert_eq ! ( :: std :: mem :: size_of :: < fd_set > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < fd_set > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < fd_set > ( ) ) ) . __fds_bits as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( fd_set ) , "::" , stringify ! ( __fds_bits ) ) ) ; } pub type fd_mask = __fd_mask ; extern "C" { pub fn select ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * mut timeval ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pselect ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * const timespec , __sigmask : * const __sigset_t ) -> :: std :: os :: raw :: c_int ; } pub type blksize_t = __blksize_t ; pub type blkcnt_t = __blkcnt_t ; pub type fsblkcnt_t = __fsblkcnt_t ; pub type fsfilcnt_t = __fsfilcnt_t ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0277]: `__mbstate_t__bindgen_ty_1` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:143397 [INFO] [stdout] | [INFO] [stdout] 3 | ... ( Debug , Copy , Clone ) ] pub struct __mbstate_t { pub __count : :: std :: os :: raw :: c_int , pub __value : __mbstate_t__bindgen_ty_1 , ... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `__mbstate_t__bindgen_ty_1` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `__mbstate_t__bindgen_ty_1`, which is required by `&__mbstate_t__bindgen_ty_1: Debug` [INFO] [stdout] = note: add `#[derive(Debug)]` to `__mbstate_t__bindgen_ty_1` or manually `impl Debug for __mbstate_t__bindgen_ty_1` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `__mbstate_t__bindgen_ty_1` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union htsFile__bindgen_ty_1 { pub bgzf : * mut BGZF , pub cram : * mut cram_fd , pub hfile : * mut hFILE , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_htsFile__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . bgzf as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( bgzf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . cram as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( cram ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . hfile as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( hfile ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFile ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile > ( ) , 96usize , concat ! ( "Size of: " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . lineno as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( lineno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . line as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( line ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_ as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_aux as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_aux ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fp as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fp ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . format as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( format ) ) ) ; } impl htsFile { # [ inline ] pub fn is_bin ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bin ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_write ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_write ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_be ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_be ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_bgzf ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bgzf ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 5usize , 27u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 5usize , 27u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( is_bin : u32 , is_write : u32 , is_be : u32 , is_cram : u32 , is_bgzf : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let is_bin : u32 = unsafe { :: std :: mem :: transmute ( is_bin ) } ; is_bin as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let is_write : u32 = unsafe { :: std :: mem :: transmute ( is_write ) } ; is_write as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_be : u32 = unsafe { :: std :: mem :: transmute ( is_be ) } ; is_be as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 1u8 , { let is_bgzf : u32 = unsafe { :: std :: mem :: transmute ( is_bgzf ) } ; is_bgzf as u64 } ) ; __bindgen_bitfield_unit . set ( 5usize , 27u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsThreadPool { pub pool : * mut hts_tpool , pub qsize : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_htsThreadPool ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsThreadPool > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsThreadPool > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . pool as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( pool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . qsize as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( qsize ) ) ) ; } pub const sam_fields_SAM_QNAME : sam_fields = 1 ; pub const sam_fields_SAM_FLAG : sam_fields = 2 ; pub const sam_fields_SAM_RNAME : sam_fields = 4 ; pub const sam_fields_SAM_POS : sam_fields = 8 ; pub const sam_fields_SAM_MAPQ : sam_fields = 16 ; pub const sam_fields_SAM_CIGAR : sam_fields = 32 ; pub const sam_fields_SAM_RNEXT : sam_fields = 64 ; pub const sam_fields_SAM_PNEXT : sam_fields = 128 ; pub const sam_fields_SAM_TLEN : sam_fields = 256 ; pub const sam_fields_SAM_SEQ : sam_fields = 512 ; pub const sam_fields_SAM_QUAL : sam_fields = 1024 ; pub const sam_fields_SAM_AUX : sam_fields = 2048 ; pub const sam_fields_SAM_RGAUX : sam_fields = 4096 ; pub type sam_fields = u32 ; pub const hts_fmt_option_CRAM_OPT_DECODE_MD : hts_fmt_option = 0 ; pub const hts_fmt_option_CRAM_OPT_PREFIX : hts_fmt_option = 1 ; pub const hts_fmt_option_CRAM_OPT_VERBOSITY : hts_fmt_option = 2 ; pub const hts_fmt_option_CRAM_OPT_SEQS_PER_SLICE : hts_fmt_option = 3 ; pub const hts_fmt_option_CRAM_OPT_SLICES_PER_CONTAINER : hts_fmt_option = 4 ; pub const hts_fmt_option_CRAM_OPT_RANGE : hts_fmt_option = 5 ; pub const hts_fmt_option_CRAM_OPT_VERSION : hts_fmt_option = 6 ; pub const hts_fmt_option_CRAM_OPT_EMBED_REF : hts_fmt_option = 7 ; pub const hts_fmt_option_CRAM_OPT_IGNORE_MD5 : hts_fmt_option = 8 ; pub const hts_fmt_option_CRAM_OPT_REFERENCE : hts_fmt_option = 9 ; pub const hts_fmt_option_CRAM_OPT_MULTI_SEQ_PER_SLICE : hts_fmt_option = 10 ; pub const hts_fmt_option_CRAM_OPT_NO_REF : hts_fmt_option = 11 ; pub const hts_fmt_option_CRAM_OPT_USE_BZIP2 : hts_fmt_option = 12 ; pub const hts_fmt_option_CRAM_OPT_SHARED_REF : hts_fmt_option = 13 ; pub const hts_fmt_option_CRAM_OPT_NTHREADS : hts_fmt_option = 14 ; pub const hts_fmt_option_CRAM_OPT_THREAD_POOL : hts_fmt_option = 15 ; pub const hts_fmt_option_CRAM_OPT_USE_LZMA : hts_fmt_option = 16 ; pub const hts_fmt_option_CRAM_OPT_USE_RANS : hts_fmt_option = 17 ; pub const hts_fmt_option_CRAM_OPT_REQUIRED_FIELDS : hts_fmt_option = 18 ; pub const hts_fmt_option_CRAM_OPT_LOSSY_NAMES : hts_fmt_option = 19 ; pub const hts_fmt_option_CRAM_OPT_BASES_PER_SLICE : hts_fmt_option = 20 ; pub const hts_fmt_option_CRAM_OPT_STORE_MD : hts_fmt_option = 21 ; pub const hts_fmt_option_CRAM_OPT_STORE_NM : hts_fmt_option = 22 ; pub const hts_fmt_option_HTS_OPT_COMPRESSION_LEVEL : hts_fmt_option = 100 ; pub const hts_fmt_option_HTS_OPT_NTHREADS : hts_fmt_option = 101 ; pub const hts_fmt_option_HTS_OPT_THREAD_POOL : hts_fmt_option = 102 ; pub const hts_fmt_option_HTS_OPT_CACHE_SIZE : hts_fmt_option = 103 ; pub const hts_fmt_option_HTS_OPT_BLOCK_SIZE : hts_fmt_option = 104 ; pub type hts_fmt_option = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union hts_opt__bindgen_ty_1 { pub i : :: std :: os :: raw :: c_int , pub s : * mut :: std :: os :: raw :: c_char , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_hts_opt__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . i as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . s as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( s ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_opt ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . arg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( arg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . opt as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . val as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( val ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . next as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( next ) ) ) ; } extern "C" { pub fn hts_opt_add ( opts : * mut * mut hts_opt , c_arg : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_apply ( fp : * mut htsFile , opts : * mut hts_opt ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_free ( opts : * mut hts_opt ) ; } extern "C" { pub fn hts_parse_format ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_parse_opt_list ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}seq_nt16_table" ] pub static mut seq_nt16_table : [ :: std :: os :: raw :: c_uchar ; 256usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_str" ] pub static mut seq_nt16_str : [ :: std :: os :: raw :: c_char ; 0usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_int" ] pub static mut seq_nt16_int : [ :: std :: os :: raw :: c_int ; 0usize ] ; } extern "C" { pub fn hts_version ( ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_detect_format ( fp : * mut hFILE , fmt : * mut htsFormat ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_format_description ( format : * const htsFormat ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_open ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_open_format ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char , fmt : * const htsFormat ) -> * mut htsFile ; } extern "C" { pub fn hts_hopen ( fp : * mut hFILE , fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_close ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_get_format ( fp : * mut htsFile ) -> * const htsFormat ; } extern "C" { pub fn hts_format_file_extension ( format : * const htsFormat ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_opt ( fp : * mut htsFile , opt : hts_fmt_option , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_getline ( fp : * mut htsFile , delimiter : :: std :: os :: raw :: c_int , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_readlines ( fn_ : * const :: std :: os :: raw :: c_char , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_readlist ( fn_ : * const :: std :: os :: raw :: c_char , is_file : :: std :: os :: raw :: c_int , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_threads ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_thread_pool ( fp : * mut htsFile , p : * mut htsThreadPool ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_cache_size ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_set_fai_filename ( fp : * mut htsFile , fn_aux : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_check_EOF ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __hts_idx_t { _unused : [ u8 ; 0 ] , } pub type hts_idx_t = __hts_idx_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair32_t { pub beg : u32 , pub end : u32 , } # [ test ] fn bindgen_test_layout_hts_pair32_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair32_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair32_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . beg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . end as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( end ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_t { pub u : u64 , pub v : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( v ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_max_t { pub u : u64 , pub v : u64 , pub max : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_max_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_max_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_max_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( v ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . max as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( max ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_reglist_t { pub reg : * const :: std :: os :: raw :: c_char , pub tid : :: std :: os :: raw :: c_int , pub intervals : * mut hts_pair32_t , pub count : u32 , pub min_beg : u32 , pub max_end : u32 , } # [ test ] fn bindgen_test_layout_hts_reglist_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_reglist_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_reglist_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . reg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . tid as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . intervals as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( intervals ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . count as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . min_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( min_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . max_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( max_end ) ) ) ; } pub type hts_readrec_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut BGZF , data : * mut :: std :: os :: raw :: c_void , r : * mut :: std :: os :: raw :: c_void , tid : * mut :: std :: os :: raw :: c_int , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_seek_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void , offset : i64 , where_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_tell_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void ) -> i64 > ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub tid : :: std :: os :: raw :: c_int , pub beg : :: std :: os :: raw :: c_int , pub end : :: std :: os :: raw :: c_int , pub n_off : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub off : * mut hts_pair64_t , pub readrec : hts_readrec_func , pub bins : hts_itr_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t__bindgen_ty_1 { pub n : :: std :: os :: raw :: c_int , pub m : :: std :: os :: raw :: c_int , pub a : * mut :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_hts_itr_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . m as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . a as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( a ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_itr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t > ( ) , 80usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . tid as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . beg as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . end as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . n_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_off as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . readrec as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . bins as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( bins ) ) ) ; } impl hts_itr_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 29u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 29u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 29u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct aux_key_t { pub key : :: std :: os :: raw :: c_int , pub min_off : u64 , pub max_off : u64 , } # [ test ] fn bindgen_test_layout_aux_key_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < aux_key_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < aux_key_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . min_off as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( min_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . max_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( max_off ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_multi_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub reg_list : * mut hts_reglist_t , pub n_reg : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_intv : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_reg : :: std :: os :: raw :: c_int , pub off : * mut hts_pair64_max_t , pub n_off : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub nocoor_off : u64 , pub readrec : hts_readrec_func , pub seek : hts_seek_func , pub tell : hts_tell_func , } # [ test ] fn bindgen_test_layout_hts_itr_multi_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_multi_t > ( ) , 104usize , concat ! ( "Size of: " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_multi_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . reg_list as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( reg_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_reg as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_intv as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_intv ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_beg as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_end as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_reg as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_off as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_off as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . nocoor_off as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( nocoor_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . readrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . seek as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( seek ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . tell as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( tell ) ) ) ; } impl hts_itr_multi_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn nocoor ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_nocoor ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 28u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 28u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , nocoor : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let nocoor : u32 = unsafe { :: std :: mem :: transmute ( nocoor ) } ; nocoor as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 28u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } extern "C" { pub fn hts_idx_init ( n : :: std :: os :: raw :: c_int , fmt : :: std :: os :: raw :: c_int , offset0 : u64 , min_shift : :: std :: os :: raw :: c_int , n_lvls : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_destroy ( idx : * mut hts_idx_t ) ; } extern "C" { pub fn hts_idx_push ( idx : * mut hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , offset : u64 , is_mapped : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_finish ( idx : * mut hts_idx_t , final_offset : u64 ) ; } extern "C" { pub fn hts_idx_save ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_save_as ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_load ( fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_load2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_get_meta ( idx : * mut hts_idx_t , l_meta : * mut u32 ) -> * mut u8 ; } extern "C" { pub fn hts_idx_set_meta ( idx : * mut hts_idx_t , l_meta : u32 , meta : * mut u8 , is_copy : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_stat ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , mapped : * mut u64 , unmapped : * mut u64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_n_no_coor ( idx : * const hts_idx_t ) -> u64 ; } extern "C" { pub fn hts_parse_decimal ( str : * const :: std :: os :: raw :: c_char , strend : * mut * mut :: std :: os :: raw :: c_char , flags : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn hts_parse_reg ( str : * const :: std :: os :: raw :: c_char , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_itr_query ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_destroy ( iter : * mut hts_itr_t ) ; } pub type hts_name2id_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int > ; pub type hts_id2name_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char > ; pub type hts_itr_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t > ; extern "C" { pub fn hts_itr_querys ( idx : * const hts_idx_t , reg : * const :: std :: os :: raw :: c_char , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_query : hts_itr_query_func , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_next ( fp : * mut BGZF , iter : * mut hts_itr_t , r : * mut :: std :: os :: raw :: c_void , data : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_seqnames ( idx : * const hts_idx_t , n : * mut :: std :: os :: raw :: c_int , getid : hts_id2name_f , hdr : * mut :: std :: os :: raw :: c_void ) -> * mut * const :: std :: os :: raw :: c_char ; } pub type hts_itr_multi_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , itr : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t > ; extern "C" { pub fn hts_itr_multi_bam ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_cram ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_regions ( idx : * const hts_idx_t , reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_specific : hts_itr_multi_query_func , readrec : hts_readrec_func , seek : hts_seek_func , tell : hts_tell_func ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_next ( fd : * mut htsFile , iter : * mut hts_itr_multi_t , r : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_reglist_free ( reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_itr_multi_destroy ( iter : * mut hts_itr_multi_t ) ; } extern "C" { pub fn hts_file_type ( fname : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct errmod_t { _unused : [ u8 ; 0 ] , } extern "C" { pub fn errmod_init ( depcorr : f64 ) -> * mut errmod_t ; } extern "C" { pub fn errmod_destroy ( em : * mut errmod_t ) ; } extern "C" { pub fn errmod_cal ( em : * const errmod_t , n : :: std :: os :: raw :: c_int , m : :: std :: os :: raw :: c_int , bases : * mut u16 , q : * mut f32 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct probaln_par_t { pub d : f32 , pub e : f32 , pub bw : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_probaln_par_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < probaln_par_t > ( ) , 12usize , concat ! ( "Size of: " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < probaln_par_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . d as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( d ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . e as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( e ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . bw as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( bw ) ) ) ; } extern "C" { pub fn probaln_glocal ( ref_ : * const u8 , l_ref : :: std :: os :: raw :: c_int , query : * const u8 , l_query : :: std :: os :: raw :: c_int , iqual : * const u8 , c : * const probaln_par_t , state : * mut :: std :: os :: raw :: c_int , q : * mut u8 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_md5_context { _unused : [ u8 ; 0 ] , } extern "C" { pub fn hts_md5_init ( ) -> * mut hts_md5_context ; } extern "C" { pub fn hts_md5_update ( ctx : * mut hts_md5_context , data : * const :: std :: os :: raw :: c_void , size : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn hts_md5_final ( digest : * mut :: std :: os :: raw :: c_uchar , ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_reset ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_hex ( hex : * mut :: std :: os :: raw :: c_char , digest : * const :: std :: os :: raw :: c_uchar ) ; } extern "C" { pub fn hts_md5_destroy ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn __assert_fail ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert_perror_fail ( __errnum : :: std :: os :: raw :: c_int , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_int ) ; } pub type _Float32 = f32 ; pub type _Float64 = f64 ; pub type _Float32x = f64 ; pub type _Float64x = u128 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct div_t { pub quot : :: std :: os :: raw :: c_int , pub rem : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_div_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < div_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( div_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < div_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( div_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . rem as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ldiv_t { pub quot : :: std :: os :: raw :: c_long , pub rem : :: std :: os :: raw :: c_long , } # [ test ] fn bindgen_test_layout_ldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct lldiv_t { pub quot : :: std :: os :: raw :: c_longlong , pub rem : :: std :: os :: raw :: c_longlong , } # [ test ] fn bindgen_test_layout_lldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < lldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < lldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } extern "C" { pub fn __ctype_get_mb_cur_max ( ) -> usize ; } extern "C" { pub fn atof ( __nptr : * const :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn atoi ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn atol ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn atoll ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtod ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn strtof ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f32 ; } extern "C" { pub fn strtold ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> u128 ; } extern "C" { pub fn strtol ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn strtoul ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strtoq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtouq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn strtoll ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtoull ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn l64a ( __n : :: std :: os :: raw :: c_long ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn a64l ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } pub type u_char = __u_char ; pub type u_short = __u_short ; pub type u_int = __u_int ; pub type u_long = __u_long ; pub type quad_t = __quad_t ; pub type u_quad_t = __u_quad_t ; pub type fsid_t = __fsid_t ; pub type loff_t = __loff_t ; pub type ino_t = __ino_t ; pub type dev_t = __dev_t ; pub type gid_t = __gid_t ; pub type mode_t = __mode_t ; pub type nlink_t = __nlink_t ; pub type uid_t = __uid_t ; pub type off_t = __off_t ; pub type pid_t = __pid_t ; pub type id_t = __id_t ; pub type daddr_t = __daddr_t ; pub type caddr_t = __caddr_t ; pub type key_t = __key_t ; pub type clock_t = __clock_t ; pub type clockid_t = __clockid_t ; pub type time_t = __time_t ; pub type timer_t = __timer_t ; pub type ulong = :: std :: os :: raw :: c_ulong ; pub type ushort = :: std :: os :: raw :: c_ushort ; pub type uint = :: std :: os :: raw :: c_uint ; pub type u_int8_t = __uint8_t ; pub type u_int16_t = __uint16_t ; pub type u_int32_t = __uint32_t ; pub type u_int64_t = __uint64_t ; pub type register_t = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __sigset_t { pub __val : [ :: std :: os :: raw :: c_ulong ; 16usize ] , } # [ test ] fn bindgen_test_layout___sigset_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __sigset_t > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __sigset_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __sigset_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __sigset_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type sigset_t = __sigset_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timeval { pub tv_sec : __time_t , pub tv_usec : __suseconds_t , } # [ test ] fn bindgen_test_layout_timeval ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timeval > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timeval ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timeval > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timeval ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_usec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_usec ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timespec { pub tv_sec : __time_t , pub tv_nsec : __syscall_slong_t , } # [ test ] fn bindgen_test_layout_timespec ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timespec > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timespec ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timespec > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timespec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_nsec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_nsec ) ) ) ; } pub type suseconds_t = __suseconds_t ; pub type __fd_mask = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct fd_set { pub __fds_bits : [ __fd_mask ; 16usize ] , } # [ test ] fn bindgen_test_layout_fd_set ( ) { assert_eq ! ( :: std :: mem :: size_of :: < fd_set > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < fd_set > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < fd_set > ( ) ) ) . __fds_bits as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( fd_set ) , "::" , stringify ! ( __fds_bits ) ) ) ; } pub type fd_mask = __fd_mask ; extern "C" { pub fn select ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * mut timeval ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pselect ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * const timespec , __sigmask : * const __sigset_t ) -> :: std :: os :: raw :: c_int ; } pub type blksize_t = __blksize_t ; pub type blkcnt_t = __blkcnt_t ; pub type fsblkcnt_t = __fsblkcnt_t ; pub type fsfilcnt_t = __fsfilcnt_t ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __atomic_wide_counter { pub __value64 : :: std :: os :: raw :: c_ulonglong , pub __value32 : __atomic_wide_counter__bindgen_ty_1 , _bindgen_union_align : u64 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __atomic_wide_counter__bindgen_ty_1 { pub __low : :: std :: os :: raw :: c_uint , pub __high : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___atomic_wide_counter__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __low as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __low ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __high as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __high ) ) ) ; } # [ test ] fn bindgen_test_layout___atomic_wide_counter ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value64 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value64 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value32 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value32 ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_list { pub __prev : * mut __pthread_internal_list , pub __next : * mut __pthread_internal_list , } # [ test ] fn bindgen_test_layout___pthread_internal_list ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_list > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_list > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __prev as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __prev ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __next as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_list_t = __pthread_internal_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_slist { pub __next : * mut __pthread_internal_slist , } # [ test ] fn bindgen_test_layout___pthread_internal_slist ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_slist > ( ) ) ) . __next as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_slist ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_slist_t = __pthread_internal_slist ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_mutex_s { pub __lock : :: std :: os :: raw :: c_int , pub __count : :: std :: os :: raw :: c_uint , pub __owner : :: std :: os :: raw :: c_int , pub __nusers : :: std :: os :: raw :: c_uint , pub __kind : :: std :: os :: raw :: c_int , pub __spins : :: std :: os :: raw :: c_short , pub __elision : :: std :: os :: raw :: c_short , pub __list : __pthread_list_t , } # [ test ] fn bindgen_test_layout___pthread_mutex_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_mutex_s > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_mutex_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __lock as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __lock ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __count as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __owner as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __owner ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __nusers as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __nusers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __kind as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __kind ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __spins as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __spins ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __elision as * const _ as usize } , 22usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __elision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __list as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __list ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_rwlock_arch_t { pub __readers : :: std :: os :: raw :: c_uint , pub __writers : :: std :: os :: raw :: c_uint , pub __wrphase_futex : :: std :: os :: raw :: c_uint , pub __writers_futex : :: std :: os :: raw :: c_uint , pub __pad3 : :: std :: os :: raw :: c_uint , pub __pad4 : :: std :: os :: raw :: c_uint , pub __cur_writer : :: std :: os :: raw :: c_int , pub __shared : :: std :: os :: raw :: c_int , pub __rwelision : :: std :: os :: raw :: c_schar , pub __pad1 : [ :: std :: os :: raw :: c_uchar ; 7usize ] , pub __pad2 : :: std :: os :: raw :: c_ulong , pub __flags : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___pthread_rwlock_arch_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_rwlock_arch_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_rwlock_arch_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __readers as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __readers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __wrphase_futex as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __wrphase_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers_futex as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad3 as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad3 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad4 as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad4 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __cur_writer as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __cur_writer ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __shared as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __shared ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __rwelision as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __rwelision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad1 as * const _ as usize } , 33usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad2 as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad2 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __flags as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __flags ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_cond_s { pub __wseq : __atomic_wide_counter , pub __g1_start : __atomic_wide_counter , pub __g_refs : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g_size : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g1_orig_size : :: std :: os :: raw :: c_uint , pub __wrefs : :: std :: os :: raw :: c_uint , pub __g_signals : [ :: std :: os :: raw :: c_uint ; 2usize ] , } # [ test ] fn bindgen_test_layout___pthread_cond_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_cond_s > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_cond_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wseq as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wseq ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_start as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_start ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_refs as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_refs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_size as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_orig_size as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_orig_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wrefs as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wrefs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_signals as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_signals ) ) ) ; } pub type __tss_t = :: std :: os :: raw :: c_uint ; pub type __thrd_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __once_flag { pub __data : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout___once_flag ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __once_flag > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __once_flag > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __once_flag > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __once_flag ) , "::" , stringify ! ( __data ) ) ) ; } pub type pthread_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutexattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_mutexattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_condattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_condattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_key_t = :: std :: os :: raw :: c_uint ; pub type pthread_once_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_attr_t { pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_attr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_attr_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_attr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutex_t { pub __data : __pthread_mutex_s , pub __size : [ :: std :: os :: raw :: c_char ; 40usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 5usize ] , } # [ test ] fn bindgen_test_layout_pthread_mutex_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutex_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutex_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_cond_t { pub __data : __pthread_cond_s , pub __size : [ :: std :: os :: raw :: c_char ; 48usize ] , pub __align : :: std :: os :: raw :: c_longlong , _bindgen_union_align : [ u64 ; 6usize ] , } # [ test ] fn bindgen_test_layout_pthread_cond_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_cond_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_cond_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlock_t { pub __data : __pthread_rwlock_arch_t , pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_rwlock_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlock_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlock_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlockattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 8usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_pthread_rwlockattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_spinlock_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrier_t { pub __size : [ :: std :: os :: raw :: c_char ; 32usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 4usize ] , } # [ test ] fn bindgen_test_layout_pthread_barrier_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrier_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrier_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrierattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_barrierattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __align ) ) ) ; } extern "C" { pub fn random ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srandom ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn initstate ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn setstate ( __statebuf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct random_data { pub fptr : * mut i32 , pub rptr : * mut i32 , pub state : * mut i32 , pub rand_type : :: std :: os :: raw :: c_int , pub rand_deg : :: std :: os :: raw :: c_int , pub rand_sep : :: std :: os :: raw :: c_int , pub end_ptr : * mut i32 , } # [ test ] fn bindgen_test_layout_random_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < random_data > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( random_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < random_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( random_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . fptr as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( fptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rptr as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . state as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( state ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_type as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_type ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_deg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_deg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_sep as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_sep ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . end_ptr as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( end_ptr ) ) ) ; } extern "C" { pub fn random_r ( __buf : * mut random_data , __result : * mut i32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srandom_r ( __seed : :: std :: os :: raw :: c_uint , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn initstate_r ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setstate_r ( __statebuf : * mut :: std :: os :: raw :: c_char , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn rand ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn rand_r ( __seed : * mut :: std :: os :: raw :: c_uint ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn drand48 ( ) -> f64 ; } extern "C" { pub fn erand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> f64 ; } extern "C" { pub fn lrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn nrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn mrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn jrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srand48 ( __seedval : :: std :: os :: raw :: c_long ) ; } extern "C" { pub fn seed48 ( __seed16v : * mut :: std :: os :: raw :: c_ushort ) -> * mut :: std :: os :: raw :: c_ushort ; } extern "C" { pub fn lcong48 ( __param : * mut :: std :: os :: raw :: c_ushort ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct drand48_data { pub __x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __old_x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __c : :: std :: os :: raw :: c_ushort , pub __init : :: std :: os :: raw :: c_ushort , pub __a : :: std :: os :: raw :: c_ulonglong , } # [ test ] fn bindgen_test_layout_drand48_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < drand48_data > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < drand48_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __x as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __old_x as * const _ as usize } , 6usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __old_x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __c as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __c ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __init as * const _ as usize } , 14usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __init ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __a as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __a ) ) ) ; } extern "C" { pub fn drand48_r ( __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn erand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn nrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn jrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand48_r ( __seedval : :: std :: os :: raw :: c_long , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn seed48_r ( __seed16v : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lcong48_r ( __param : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn malloc ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn calloc ( __nmemb : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn realloc ( __ptr : * mut :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn free ( __ptr : * mut :: std :: os :: raw :: c_void ) ; } extern "C" { pub fn reallocarray ( __ptr : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn alloca ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn valloc ( __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn posix_memalign ( __memptr : * mut * mut :: std :: os :: raw :: c_void , __alignment : usize , __size : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn aligned_alloc ( __alignment : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn abort ( ) ; } extern "C" { pub fn atexit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn at_quick_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn on_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( __status : :: std :: os :: raw :: c_int , __arg : * mut :: std :: os :: raw :: c_void ) > , __arg : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn quick_exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn _Exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn getenv ( __name : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn putenv ( __string : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setenv ( __name : * const :: std :: os :: raw :: c_char , __value : * const :: std :: os :: raw :: c_char , __replace : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn unsetenv ( __name : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearenv ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mktemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn mkstemp ( __template : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkstemps ( __template : * mut :: std :: os :: raw :: c_char , __suffixlen : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkdtemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn system ( __command : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn realpath ( __name : * const :: std :: os :: raw :: c_char , __resolved : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } pub type __compar_fn_t = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * const :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int > ; extern "C" { pub fn bsearch ( __key : * const :: std :: os :: raw :: c_void , __base : * const :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn qsort ( __base : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) ; } extern "C" { pub fn abs ( __x : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn labs ( __x : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn llabs ( __x : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn div ( __numer : :: std :: os :: raw :: c_int , __denom : :: std :: os :: raw :: c_int ) -> div_t ; } extern "C" { pub fn ldiv ( __numer : :: std :: os :: raw :: c_long , __denom : :: std :: os :: raw :: c_long ) -> ldiv_t ; } extern "C" { pub fn lldiv ( __numer : :: std :: os :: raw :: c_longlong , __denom : :: std :: os :: raw :: c_longlong ) -> lldiv_t ; } extern "C" { pub fn ecvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn fcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn gcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qecvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qfcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qgcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ecvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fcvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qecvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qfcvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mblen ( __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbtowc ( __pwc : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn wctomb ( __s : * mut :: std :: os :: raw :: c_char , __wchar : wchar_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbstowcs ( __pwcs : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> usize ; } extern "C" { pub fn wcstombs ( __s : * mut :: std :: os :: raw :: c_char , __pwcs : * const wchar_t , __n : usize ) -> usize ; } extern "C" { pub fn rpmatch ( __response : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getsubopt ( __optionp : * mut * mut :: std :: os :: raw :: c_char , __tokens : * const * mut :: std :: os :: raw :: c_char , __valuep : * mut * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getloadavg ( __loadavg : * mut f64 , __nelem : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memcpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memmove ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memccpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memset ( __s : * mut :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn __memcmpeq ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memchr ( __s : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn strcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcoll ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_ulong ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __locale_struct { pub __locales : [ * mut __locale_data ; 13usize ] , pub __ctype_b : * const :: std :: os :: raw :: c_ushort , pub __ctype_tolower : * const :: std :: os :: raw :: c_int , pub __ctype_toupper : * const :: std :: os :: raw :: c_int , pub __names : [ * const :: std :: os :: raw :: c_char ; 13usize ] , } # [ test ] fn bindgen_test_layout___locale_struct ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __locale_struct > ( ) , 232usize , concat ! ( "Size of: " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __locale_struct > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __locales as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __locales ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_b as * const _ as usize } , 104usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_b ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_tolower as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_tolower ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_toupper as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_toupper ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __names as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __names ) ) ) ; } pub type __locale_t = * mut __locale_struct ; pub type locale_t = __locale_t ; extern "C" { pub fn strcoll_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __l : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm_l ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize , __l : locale_t ) -> usize ; } extern "C" { pub fn strdup ( __s : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strndup ( __string : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strrchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcspn ( __s : * const :: std :: os :: raw :: c_char , __reject : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strspn ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strpbrk ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strstr ( __haystack : * const :: std :: os :: raw :: c_char , __needle : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strlen ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strnlen ( __string : * const :: std :: os :: raw :: c_char , __maxlen : usize ) -> usize ; } extern "C" { pub fn strerror ( __errnum : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { # [ link_name = "\u{1}__xpg_strerror_r" ] pub fn strerror_r ( __errnum : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __buflen : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strerror_l ( __errnum : :: std :: os :: raw :: c_int , __l : locale_t ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcopy ( __src : * const :: std :: os :: raw :: c_void , __dest : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn index ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn rindex ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ffs ( __i : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsl ( __l : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsll ( __ll : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : usize , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn explicit_bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn strsep ( __stringp : * mut * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strsignal ( __sig : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } pub type va_list = __builtin_va_list ; pub type __gnuc_va_list = __builtin_va_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __mbstate_t { pub __count : :: std :: os :: raw :: c_int , pub __value : __mbstate_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0277]: `bcf_info_t__bindgen_ty_1` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:183939 [INFO] [stdout] | [INFO] [stdout] 3 | ... ( Debug , Copy , Clone ) ] pub struct bcf_info_t { pub key : :: std :: os :: raw :: c_int , pub type_ : :: std :: os :: raw :: c_int , pub len : :: std :: os :: raw :: c_int , pub v1 : bcf_info_t__bindgen_ty_1 , ... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ `bcf_info_t__bindgen_ty_1` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `bcf_info_t__bindgen_ty_1` [INFO] [stdout] = note: add `#[derive(Debug)]` to `bcf_info_t__bindgen_ty_1` or manually `impl Debug for bcf_info_t__bindgen_ty_1` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `bcf_info_t__bindgen_ty_1` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union htsFile__bindgen_ty_1 { pub bgzf : * mut BGZF , pub cram : * mut cram_fd , pub hfile : * mut hFILE , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_htsFile__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . bgzf as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( bgzf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . cram as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( cram ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . hfile as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( hfile ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFile ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile > ( ) , 96usize , concat ! ( "Size of: " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . lineno as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( lineno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . line as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( line ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_ as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_aux as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_aux ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fp as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fp ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . format as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( format ) ) ) ; } impl htsFile { # [ inline ] pub fn is_bin ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bin ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_write ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_write ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_be ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_be ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_bgzf ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bgzf ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 5usize , 27u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 5usize , 27u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( is_bin : u32 , is_write : u32 , is_be : u32 , is_cram : u32 , is_bgzf : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let is_bin : u32 = unsafe { :: std :: mem :: transmute ( is_bin ) } ; is_bin as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let is_write : u32 = unsafe { :: std :: mem :: transmute ( is_write ) } ; is_write as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_be : u32 = unsafe { :: std :: mem :: transmute ( is_be ) } ; is_be as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 1u8 , { let is_bgzf : u32 = unsafe { :: std :: mem :: transmute ( is_bgzf ) } ; is_bgzf as u64 } ) ; __bindgen_bitfield_unit . set ( 5usize , 27u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsThreadPool { pub pool : * mut hts_tpool , pub qsize : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_htsThreadPool ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsThreadPool > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsThreadPool > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . pool as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( pool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . qsize as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( qsize ) ) ) ; } pub const sam_fields_SAM_QNAME : sam_fields = 1 ; pub const sam_fields_SAM_FLAG : sam_fields = 2 ; pub const sam_fields_SAM_RNAME : sam_fields = 4 ; pub const sam_fields_SAM_POS : sam_fields = 8 ; pub const sam_fields_SAM_MAPQ : sam_fields = 16 ; pub const sam_fields_SAM_CIGAR : sam_fields = 32 ; pub const sam_fields_SAM_RNEXT : sam_fields = 64 ; pub const sam_fields_SAM_PNEXT : sam_fields = 128 ; pub const sam_fields_SAM_TLEN : sam_fields = 256 ; pub const sam_fields_SAM_SEQ : sam_fields = 512 ; pub const sam_fields_SAM_QUAL : sam_fields = 1024 ; pub const sam_fields_SAM_AUX : sam_fields = 2048 ; pub const sam_fields_SAM_RGAUX : sam_fields = 4096 ; pub type sam_fields = u32 ; pub const hts_fmt_option_CRAM_OPT_DECODE_MD : hts_fmt_option = 0 ; pub const hts_fmt_option_CRAM_OPT_PREFIX : hts_fmt_option = 1 ; pub const hts_fmt_option_CRAM_OPT_VERBOSITY : hts_fmt_option = 2 ; pub const hts_fmt_option_CRAM_OPT_SEQS_PER_SLICE : hts_fmt_option = 3 ; pub const hts_fmt_option_CRAM_OPT_SLICES_PER_CONTAINER : hts_fmt_option = 4 ; pub const hts_fmt_option_CRAM_OPT_RANGE : hts_fmt_option = 5 ; pub const hts_fmt_option_CRAM_OPT_VERSION : hts_fmt_option = 6 ; pub const hts_fmt_option_CRAM_OPT_EMBED_REF : hts_fmt_option = 7 ; pub const hts_fmt_option_CRAM_OPT_IGNORE_MD5 : hts_fmt_option = 8 ; pub const hts_fmt_option_CRAM_OPT_REFERENCE : hts_fmt_option = 9 ; pub const hts_fmt_option_CRAM_OPT_MULTI_SEQ_PER_SLICE : hts_fmt_option = 10 ; pub const hts_fmt_option_CRAM_OPT_NO_REF : hts_fmt_option = 11 ; pub const hts_fmt_option_CRAM_OPT_USE_BZIP2 : hts_fmt_option = 12 ; pub const hts_fmt_option_CRAM_OPT_SHARED_REF : hts_fmt_option = 13 ; pub const hts_fmt_option_CRAM_OPT_NTHREADS : hts_fmt_option = 14 ; pub const hts_fmt_option_CRAM_OPT_THREAD_POOL : hts_fmt_option = 15 ; pub const hts_fmt_option_CRAM_OPT_USE_LZMA : hts_fmt_option = 16 ; pub const hts_fmt_option_CRAM_OPT_USE_RANS : hts_fmt_option = 17 ; pub const hts_fmt_option_CRAM_OPT_REQUIRED_FIELDS : hts_fmt_option = 18 ; pub const hts_fmt_option_CRAM_OPT_LOSSY_NAMES : hts_fmt_option = 19 ; pub const hts_fmt_option_CRAM_OPT_BASES_PER_SLICE : hts_fmt_option = 20 ; pub const hts_fmt_option_CRAM_OPT_STORE_MD : hts_fmt_option = 21 ; pub const hts_fmt_option_CRAM_OPT_STORE_NM : hts_fmt_option = 22 ; pub const hts_fmt_option_HTS_OPT_COMPRESSION_LEVEL : hts_fmt_option = 100 ; pub const hts_fmt_option_HTS_OPT_NTHREADS : hts_fmt_option = 101 ; pub const hts_fmt_option_HTS_OPT_THREAD_POOL : hts_fmt_option = 102 ; pub const hts_fmt_option_HTS_OPT_CACHE_SIZE : hts_fmt_option = 103 ; pub const hts_fmt_option_HTS_OPT_BLOCK_SIZE : hts_fmt_option = 104 ; pub type hts_fmt_option = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union hts_opt__bindgen_ty_1 { pub i : :: std :: os :: raw :: c_int , pub s : * mut :: std :: os :: raw :: c_char , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_hts_opt__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . i as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . s as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( s ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_opt ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . arg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( arg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . opt as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . val as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( val ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . next as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( next ) ) ) ; } extern "C" { pub fn hts_opt_add ( opts : * mut * mut hts_opt , c_arg : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_apply ( fp : * mut htsFile , opts : * mut hts_opt ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_free ( opts : * mut hts_opt ) ; } extern "C" { pub fn hts_parse_format ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_parse_opt_list ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}seq_nt16_table" ] pub static mut seq_nt16_table : [ :: std :: os :: raw :: c_uchar ; 256usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_str" ] pub static mut seq_nt16_str : [ :: std :: os :: raw :: c_char ; 0usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_int" ] pub static mut seq_nt16_int : [ :: std :: os :: raw :: c_int ; 0usize ] ; } extern "C" { pub fn hts_version ( ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_detect_format ( fp : * mut hFILE , fmt : * mut htsFormat ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_format_description ( format : * const htsFormat ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_open ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_open_format ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char , fmt : * const htsFormat ) -> * mut htsFile ; } extern "C" { pub fn hts_hopen ( fp : * mut hFILE , fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_close ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_get_format ( fp : * mut htsFile ) -> * const htsFormat ; } extern "C" { pub fn hts_format_file_extension ( format : * const htsFormat ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_opt ( fp : * mut htsFile , opt : hts_fmt_option , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_getline ( fp : * mut htsFile , delimiter : :: std :: os :: raw :: c_int , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_readlines ( fn_ : * const :: std :: os :: raw :: c_char , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_readlist ( fn_ : * const :: std :: os :: raw :: c_char , is_file : :: std :: os :: raw :: c_int , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_threads ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_thread_pool ( fp : * mut htsFile , p : * mut htsThreadPool ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_cache_size ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_set_fai_filename ( fp : * mut htsFile , fn_aux : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_check_EOF ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __hts_idx_t { _unused : [ u8 ; 0 ] , } pub type hts_idx_t = __hts_idx_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair32_t { pub beg : u32 , pub end : u32 , } # [ test ] fn bindgen_test_layout_hts_pair32_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair32_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair32_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . beg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . end as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( end ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_t { pub u : u64 , pub v : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( v ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_max_t { pub u : u64 , pub v : u64 , pub max : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_max_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_max_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_max_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( v ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . max as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( max ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_reglist_t { pub reg : * const :: std :: os :: raw :: c_char , pub tid : :: std :: os :: raw :: c_int , pub intervals : * mut hts_pair32_t , pub count : u32 , pub min_beg : u32 , pub max_end : u32 , } # [ test ] fn bindgen_test_layout_hts_reglist_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_reglist_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_reglist_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . reg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . tid as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . intervals as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( intervals ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . count as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . min_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( min_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . max_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( max_end ) ) ) ; } pub type hts_readrec_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut BGZF , data : * mut :: std :: os :: raw :: c_void , r : * mut :: std :: os :: raw :: c_void , tid : * mut :: std :: os :: raw :: c_int , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_seek_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void , offset : i64 , where_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_tell_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void ) -> i64 > ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub tid : :: std :: os :: raw :: c_int , pub beg : :: std :: os :: raw :: c_int , pub end : :: std :: os :: raw :: c_int , pub n_off : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub off : * mut hts_pair64_t , pub readrec : hts_readrec_func , pub bins : hts_itr_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t__bindgen_ty_1 { pub n : :: std :: os :: raw :: c_int , pub m : :: std :: os :: raw :: c_int , pub a : * mut :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_hts_itr_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . m as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . a as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( a ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_itr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t > ( ) , 80usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . tid as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . beg as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . end as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . n_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_off as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . readrec as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . bins as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( bins ) ) ) ; } impl hts_itr_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 29u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 29u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 29u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct aux_key_t { pub key : :: std :: os :: raw :: c_int , pub min_off : u64 , pub max_off : u64 , } # [ test ] fn bindgen_test_layout_aux_key_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < aux_key_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < aux_key_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . min_off as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( min_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . max_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( max_off ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_multi_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub reg_list : * mut hts_reglist_t , pub n_reg : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_intv : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_reg : :: std :: os :: raw :: c_int , pub off : * mut hts_pair64_max_t , pub n_off : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub nocoor_off : u64 , pub readrec : hts_readrec_func , pub seek : hts_seek_func , pub tell : hts_tell_func , } # [ test ] fn bindgen_test_layout_hts_itr_multi_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_multi_t > ( ) , 104usize , concat ! ( "Size of: " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_multi_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . reg_list as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( reg_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_reg as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_intv as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_intv ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_beg as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_end as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_reg as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_off as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_off as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . nocoor_off as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( nocoor_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . readrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . seek as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( seek ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . tell as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( tell ) ) ) ; } impl hts_itr_multi_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn nocoor ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_nocoor ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 28u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 28u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , nocoor : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let nocoor : u32 = unsafe { :: std :: mem :: transmute ( nocoor ) } ; nocoor as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 28u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } extern "C" { pub fn hts_idx_init ( n : :: std :: os :: raw :: c_int , fmt : :: std :: os :: raw :: c_int , offset0 : u64 , min_shift : :: std :: os :: raw :: c_int , n_lvls : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_destroy ( idx : * mut hts_idx_t ) ; } extern "C" { pub fn hts_idx_push ( idx : * mut hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , offset : u64 , is_mapped : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_finish ( idx : * mut hts_idx_t , final_offset : u64 ) ; } extern "C" { pub fn hts_idx_save ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_save_as ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_load ( fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_load2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_get_meta ( idx : * mut hts_idx_t , l_meta : * mut u32 ) -> * mut u8 ; } extern "C" { pub fn hts_idx_set_meta ( idx : * mut hts_idx_t , l_meta : u32 , meta : * mut u8 , is_copy : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_stat ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , mapped : * mut u64 , unmapped : * mut u64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_n_no_coor ( idx : * const hts_idx_t ) -> u64 ; } extern "C" { pub fn hts_parse_decimal ( str : * const :: std :: os :: raw :: c_char , strend : * mut * mut :: std :: os :: raw :: c_char , flags : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn hts_parse_reg ( str : * const :: std :: os :: raw :: c_char , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_itr_query ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_destroy ( iter : * mut hts_itr_t ) ; } pub type hts_name2id_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int > ; pub type hts_id2name_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char > ; pub type hts_itr_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t > ; extern "C" { pub fn hts_itr_querys ( idx : * const hts_idx_t , reg : * const :: std :: os :: raw :: c_char , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_query : hts_itr_query_func , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_next ( fp : * mut BGZF , iter : * mut hts_itr_t , r : * mut :: std :: os :: raw :: c_void , data : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_seqnames ( idx : * const hts_idx_t , n : * mut :: std :: os :: raw :: c_int , getid : hts_id2name_f , hdr : * mut :: std :: os :: raw :: c_void ) -> * mut * const :: std :: os :: raw :: c_char ; } pub type hts_itr_multi_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , itr : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t > ; extern "C" { pub fn hts_itr_multi_bam ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_cram ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_regions ( idx : * const hts_idx_t , reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_specific : hts_itr_multi_query_func , readrec : hts_readrec_func , seek : hts_seek_func , tell : hts_tell_func ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_next ( fd : * mut htsFile , iter : * mut hts_itr_multi_t , r : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_reglist_free ( reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_itr_multi_destroy ( iter : * mut hts_itr_multi_t ) ; } extern "C" { pub fn hts_file_type ( fname : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct errmod_t { _unused : [ u8 ; 0 ] , } extern "C" { pub fn errmod_init ( depcorr : f64 ) -> * mut errmod_t ; } extern "C" { pub fn errmod_destroy ( em : * mut errmod_t ) ; } extern "C" { pub fn errmod_cal ( em : * const errmod_t , n : :: std :: os :: raw :: c_int , m : :: std :: os :: raw :: c_int , bases : * mut u16 , q : * mut f32 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct probaln_par_t { pub d : f32 , pub e : f32 , pub bw : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_probaln_par_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < probaln_par_t > ( ) , 12usize , concat ! ( "Size of: " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < probaln_par_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . d as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( d ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . e as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( e ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . bw as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( bw ) ) ) ; } extern "C" { pub fn probaln_glocal ( ref_ : * const u8 , l_ref : :: std :: os :: raw :: c_int , query : * const u8 , l_query : :: std :: os :: raw :: c_int , iqual : * const u8 , c : * const probaln_par_t , state : * mut :: std :: os :: raw :: c_int , q : * mut u8 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_md5_context { _unused : [ u8 ; 0 ] , } extern "C" { pub fn hts_md5_init ( ) -> * mut hts_md5_context ; } extern "C" { pub fn hts_md5_update ( ctx : * mut hts_md5_context , data : * const :: std :: os :: raw :: c_void , size : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn hts_md5_final ( digest : * mut :: std :: os :: raw :: c_uchar , ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_reset ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_hex ( hex : * mut :: std :: os :: raw :: c_char , digest : * const :: std :: os :: raw :: c_uchar ) ; } extern "C" { pub fn hts_md5_destroy ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn __assert_fail ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert_perror_fail ( __errnum : :: std :: os :: raw :: c_int , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_int ) ; } pub type _Float32 = f32 ; pub type _Float64 = f64 ; pub type _Float32x = f64 ; pub type _Float64x = u128 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct div_t { pub quot : :: std :: os :: raw :: c_int , pub rem : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_div_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < div_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( div_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < div_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( div_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . rem as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ldiv_t { pub quot : :: std :: os :: raw :: c_long , pub rem : :: std :: os :: raw :: c_long , } # [ test ] fn bindgen_test_layout_ldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct lldiv_t { pub quot : :: std :: os :: raw :: c_longlong , pub rem : :: std :: os :: raw :: c_longlong , } # [ test ] fn bindgen_test_layout_lldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < lldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < lldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } extern "C" { pub fn __ctype_get_mb_cur_max ( ) -> usize ; } extern "C" { pub fn atof ( __nptr : * const :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn atoi ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn atol ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn atoll ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtod ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn strtof ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f32 ; } extern "C" { pub fn strtold ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> u128 ; } extern "C" { pub fn strtol ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn strtoul ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strtoq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtouq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn strtoll ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtoull ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn l64a ( __n : :: std :: os :: raw :: c_long ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn a64l ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } pub type u_char = __u_char ; pub type u_short = __u_short ; pub type u_int = __u_int ; pub type u_long = __u_long ; pub type quad_t = __quad_t ; pub type u_quad_t = __u_quad_t ; pub type fsid_t = __fsid_t ; pub type loff_t = __loff_t ; pub type ino_t = __ino_t ; pub type dev_t = __dev_t ; pub type gid_t = __gid_t ; pub type mode_t = __mode_t ; pub type nlink_t = __nlink_t ; pub type uid_t = __uid_t ; pub type off_t = __off_t ; pub type pid_t = __pid_t ; pub type id_t = __id_t ; pub type daddr_t = __daddr_t ; pub type caddr_t = __caddr_t ; pub type key_t = __key_t ; pub type clock_t = __clock_t ; pub type clockid_t = __clockid_t ; pub type time_t = __time_t ; pub type timer_t = __timer_t ; pub type ulong = :: std :: os :: raw :: c_ulong ; pub type ushort = :: std :: os :: raw :: c_ushort ; pub type uint = :: std :: os :: raw :: c_uint ; pub type u_int8_t = __uint8_t ; pub type u_int16_t = __uint16_t ; pub type u_int32_t = __uint32_t ; pub type u_int64_t = __uint64_t ; pub type register_t = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __sigset_t { pub __val : [ :: std :: os :: raw :: c_ulong ; 16usize ] , } # [ test ] fn bindgen_test_layout___sigset_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __sigset_t > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __sigset_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __sigset_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __sigset_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type sigset_t = __sigset_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timeval { pub tv_sec : __time_t , pub tv_usec : __suseconds_t , } # [ test ] fn bindgen_test_layout_timeval ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timeval > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timeval ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timeval > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timeval ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_usec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_usec ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timespec { pub tv_sec : __time_t , pub tv_nsec : __syscall_slong_t , } # [ test ] fn bindgen_test_layout_timespec ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timespec > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timespec ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timespec > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timespec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_nsec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_nsec ) ) ) ; } pub type suseconds_t = __suseconds_t ; pub type __fd_mask = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct fd_set { pub __fds_bits : [ __fd_mask ; 16usize ] , } # [ test ] fn bindgen_test_layout_fd_set ( ) { assert_eq ! ( :: std :: mem :: size_of :: < fd_set > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < fd_set > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < fd_set > ( ) ) ) . __fds_bits as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( fd_set ) , "::" , stringify ! ( __fds_bits ) ) ) ; } pub type fd_mask = __fd_mask ; extern "C" { pub fn select ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * mut timeval ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pselect ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * const timespec , __sigmask : * const __sigset_t ) -> :: std :: os :: raw :: c_int ; } pub type blksize_t = __blksize_t ; pub type blkcnt_t = __blkcnt_t ; pub type fsblkcnt_t = __fsblkcnt_t ; pub type fsfilcnt_t = __fsfilcnt_t ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __atomic_wide_counter { pub __value64 : :: std :: os :: raw :: c_ulonglong , pub __value32 : __atomic_wide_counter__bindgen_ty_1 , _bindgen_union_align : u64 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __atomic_wide_counter__bindgen_ty_1 { pub __low : :: std :: os :: raw :: c_uint , pub __high : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___atomic_wide_counter__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __low as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __low ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __high as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __high ) ) ) ; } # [ test ] fn bindgen_test_layout___atomic_wide_counter ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value64 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value64 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value32 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value32 ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_list { pub __prev : * mut __pthread_internal_list , pub __next : * mut __pthread_internal_list , } # [ test ] fn bindgen_test_layout___pthread_internal_list ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_list > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_list > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __prev as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __prev ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __next as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_list_t = __pthread_internal_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_slist { pub __next : * mut __pthread_internal_slist , } # [ test ] fn bindgen_test_layout___pthread_internal_slist ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_slist > ( ) ) ) . __next as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_slist ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_slist_t = __pthread_internal_slist ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_mutex_s { pub __lock : :: std :: os :: raw :: c_int , pub __count : :: std :: os :: raw :: c_uint , pub __owner : :: std :: os :: raw :: c_int , pub __nusers : :: std :: os :: raw :: c_uint , pub __kind : :: std :: os :: raw :: c_int , pub __spins : :: std :: os :: raw :: c_short , pub __elision : :: std :: os :: raw :: c_short , pub __list : __pthread_list_t , } # [ test ] fn bindgen_test_layout___pthread_mutex_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_mutex_s > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_mutex_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __lock as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __lock ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __count as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __owner as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __owner ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __nusers as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __nusers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __kind as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __kind ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __spins as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __spins ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __elision as * const _ as usize } , 22usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __elision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __list as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __list ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_rwlock_arch_t { pub __readers : :: std :: os :: raw :: c_uint , pub __writers : :: std :: os :: raw :: c_uint , pub __wrphase_futex : :: std :: os :: raw :: c_uint , pub __writers_futex : :: std :: os :: raw :: c_uint , pub __pad3 : :: std :: os :: raw :: c_uint , pub __pad4 : :: std :: os :: raw :: c_uint , pub __cur_writer : :: std :: os :: raw :: c_int , pub __shared : :: std :: os :: raw :: c_int , pub __rwelision : :: std :: os :: raw :: c_schar , pub __pad1 : [ :: std :: os :: raw :: c_uchar ; 7usize ] , pub __pad2 : :: std :: os :: raw :: c_ulong , pub __flags : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___pthread_rwlock_arch_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_rwlock_arch_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_rwlock_arch_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __readers as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __readers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __wrphase_futex as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __wrphase_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers_futex as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad3 as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad3 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad4 as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad4 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __cur_writer as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __cur_writer ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __shared as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __shared ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __rwelision as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __rwelision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad1 as * const _ as usize } , 33usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad2 as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad2 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __flags as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __flags ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_cond_s { pub __wseq : __atomic_wide_counter , pub __g1_start : __atomic_wide_counter , pub __g_refs : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g_size : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g1_orig_size : :: std :: os :: raw :: c_uint , pub __wrefs : :: std :: os :: raw :: c_uint , pub __g_signals : [ :: std :: os :: raw :: c_uint ; 2usize ] , } # [ test ] fn bindgen_test_layout___pthread_cond_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_cond_s > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_cond_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wseq as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wseq ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_start as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_start ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_refs as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_refs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_size as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_orig_size as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_orig_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wrefs as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wrefs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_signals as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_signals ) ) ) ; } pub type __tss_t = :: std :: os :: raw :: c_uint ; pub type __thrd_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __once_flag { pub __data : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout___once_flag ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __once_flag > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __once_flag > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __once_flag > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __once_flag ) , "::" , stringify ! ( __data ) ) ) ; } pub type pthread_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutexattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_mutexattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_condattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_condattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_key_t = :: std :: os :: raw :: c_uint ; pub type pthread_once_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_attr_t { pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_attr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_attr_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_attr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutex_t { pub __data : __pthread_mutex_s , pub __size : [ :: std :: os :: raw :: c_char ; 40usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 5usize ] , } # [ test ] fn bindgen_test_layout_pthread_mutex_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutex_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutex_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_cond_t { pub __data : __pthread_cond_s , pub __size : [ :: std :: os :: raw :: c_char ; 48usize ] , pub __align : :: std :: os :: raw :: c_longlong , _bindgen_union_align : [ u64 ; 6usize ] , } # [ test ] fn bindgen_test_layout_pthread_cond_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_cond_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_cond_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlock_t { pub __data : __pthread_rwlock_arch_t , pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_rwlock_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlock_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlock_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlockattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 8usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_pthread_rwlockattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_spinlock_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrier_t { pub __size : [ :: std :: os :: raw :: c_char ; 32usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 4usize ] , } # [ test ] fn bindgen_test_layout_pthread_barrier_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrier_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrier_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrierattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_barrierattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __align ) ) ) ; } extern "C" { pub fn random ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srandom ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn initstate ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn setstate ( __statebuf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct random_data { pub fptr : * mut i32 , pub rptr : * mut i32 , pub state : * mut i32 , pub rand_type : :: std :: os :: raw :: c_int , pub rand_deg : :: std :: os :: raw :: c_int , pub rand_sep : :: std :: os :: raw :: c_int , pub end_ptr : * mut i32 , } # [ test ] fn bindgen_test_layout_random_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < random_data > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( random_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < random_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( random_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . fptr as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( fptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rptr as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . state as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( state ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_type as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_type ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_deg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_deg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_sep as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_sep ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . end_ptr as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( end_ptr ) ) ) ; } extern "C" { pub fn random_r ( __buf : * mut random_data , __result : * mut i32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srandom_r ( __seed : :: std :: os :: raw :: c_uint , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn initstate_r ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setstate_r ( __statebuf : * mut :: std :: os :: raw :: c_char , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn rand ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn rand_r ( __seed : * mut :: std :: os :: raw :: c_uint ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn drand48 ( ) -> f64 ; } extern "C" { pub fn erand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> f64 ; } extern "C" { pub fn lrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn nrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn mrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn jrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srand48 ( __seedval : :: std :: os :: raw :: c_long ) ; } extern "C" { pub fn seed48 ( __seed16v : * mut :: std :: os :: raw :: c_ushort ) -> * mut :: std :: os :: raw :: c_ushort ; } extern "C" { pub fn lcong48 ( __param : * mut :: std :: os :: raw :: c_ushort ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct drand48_data { pub __x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __old_x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __c : :: std :: os :: raw :: c_ushort , pub __init : :: std :: os :: raw :: c_ushort , pub __a : :: std :: os :: raw :: c_ulonglong , } # [ test ] fn bindgen_test_layout_drand48_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < drand48_data > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < drand48_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __x as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __old_x as * const _ as usize } , 6usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __old_x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __c as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __c ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __init as * const _ as usize } , 14usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __init ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __a as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __a ) ) ) ; } extern "C" { pub fn drand48_r ( __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn erand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn nrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn jrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand48_r ( __seedval : :: std :: os :: raw :: c_long , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn seed48_r ( __seed16v : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lcong48_r ( __param : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn malloc ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn calloc ( __nmemb : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn realloc ( __ptr : * mut :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn free ( __ptr : * mut :: std :: os :: raw :: c_void ) ; } extern "C" { pub fn reallocarray ( __ptr : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn alloca ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn valloc ( __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn posix_memalign ( __memptr : * mut * mut :: std :: os :: raw :: c_void , __alignment : usize , __size : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn aligned_alloc ( __alignment : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn abort ( ) ; } extern "C" { pub fn atexit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn at_quick_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn on_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( __status : :: std :: os :: raw :: c_int , __arg : * mut :: std :: os :: raw :: c_void ) > , __arg : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn quick_exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn _Exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn getenv ( __name : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn putenv ( __string : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setenv ( __name : * const :: std :: os :: raw :: c_char , __value : * const :: std :: os :: raw :: c_char , __replace : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn unsetenv ( __name : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearenv ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mktemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn mkstemp ( __template : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkstemps ( __template : * mut :: std :: os :: raw :: c_char , __suffixlen : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkdtemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn system ( __command : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn realpath ( __name : * const :: std :: os :: raw :: c_char , __resolved : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } pub type __compar_fn_t = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * const :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int > ; extern "C" { pub fn bsearch ( __key : * const :: std :: os :: raw :: c_void , __base : * const :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn qsort ( __base : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) ; } extern "C" { pub fn abs ( __x : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn labs ( __x : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn llabs ( __x : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn div ( __numer : :: std :: os :: raw :: c_int , __denom : :: std :: os :: raw :: c_int ) -> div_t ; } extern "C" { pub fn ldiv ( __numer : :: std :: os :: raw :: c_long , __denom : :: std :: os :: raw :: c_long ) -> ldiv_t ; } extern "C" { pub fn lldiv ( __numer : :: std :: os :: raw :: c_longlong , __denom : :: std :: os :: raw :: c_longlong ) -> lldiv_t ; } extern "C" { pub fn ecvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn fcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn gcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qecvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qfcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qgcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ecvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fcvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qecvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qfcvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mblen ( __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbtowc ( __pwc : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn wctomb ( __s : * mut :: std :: os :: raw :: c_char , __wchar : wchar_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbstowcs ( __pwcs : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> usize ; } extern "C" { pub fn wcstombs ( __s : * mut :: std :: os :: raw :: c_char , __pwcs : * const wchar_t , __n : usize ) -> usize ; } extern "C" { pub fn rpmatch ( __response : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getsubopt ( __optionp : * mut * mut :: std :: os :: raw :: c_char , __tokens : * const * mut :: std :: os :: raw :: c_char , __valuep : * mut * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getloadavg ( __loadavg : * mut f64 , __nelem : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memcpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memmove ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memccpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memset ( __s : * mut :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn __memcmpeq ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memchr ( __s : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn strcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcoll ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_ulong ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __locale_struct { pub __locales : [ * mut __locale_data ; 13usize ] , pub __ctype_b : * const :: std :: os :: raw :: c_ushort , pub __ctype_tolower : * const :: std :: os :: raw :: c_int , pub __ctype_toupper : * const :: std :: os :: raw :: c_int , pub __names : [ * const :: std :: os :: raw :: c_char ; 13usize ] , } # [ test ] fn bindgen_test_layout___locale_struct ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __locale_struct > ( ) , 232usize , concat ! ( "Size of: " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __locale_struct > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __locales as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __locales ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_b as * const _ as usize } , 104usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_b ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_tolower as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_tolower ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_toupper as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_toupper ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __names as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __names ) ) ) ; } pub type __locale_t = * mut __locale_struct ; pub type locale_t = __locale_t ; extern "C" { pub fn strcoll_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __l : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm_l ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize , __l : locale_t ) -> usize ; } extern "C" { pub fn strdup ( __s : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strndup ( __string : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strrchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcspn ( __s : * const :: std :: os :: raw :: c_char , __reject : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strspn ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strpbrk ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strstr ( __haystack : * const :: std :: os :: raw :: c_char , __needle : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strlen ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strnlen ( __string : * const :: std :: os :: raw :: c_char , __maxlen : usize ) -> usize ; } extern "C" { pub fn strerror ( __errnum : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { # [ link_name = "\u{1}__xpg_strerror_r" ] pub fn strerror_r ( __errnum : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __buflen : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strerror_l ( __errnum : :: std :: os :: raw :: c_int , __l : locale_t ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcopy ( __src : * const :: std :: os :: raw :: c_void , __dest : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn index ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn rindex ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ffs ( __i : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsl ( __l : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsll ( __ll : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : usize , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn explicit_bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn strsep ( __stringp : * mut * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strsignal ( __sig : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } pub type va_list = __builtin_va_list ; pub type __gnuc_va_list = __builtin_va_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __mbstate_t { pub __count : :: std :: os :: raw :: c_int , pub __value : __mbstate_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __mbstate_t__bindgen_ty_1 { pub __wch : :: std :: os :: raw :: c_uint , pub __wchb : [ :: std :: os :: raw :: c_char ; 4usize ] , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout___mbstate_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __mbstate_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __mbstate_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __mbstate_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t__bindgen_ty_1 > ( ) ) ) . __wch as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) , "::" , stringify ! ( __wch ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t__bindgen_ty_1 > ( ) ) ) . __wchb as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) , "::" , stringify ! ( __wchb ) ) ) ; } # [ test ] fn bindgen_test_layout___mbstate_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __mbstate_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __mbstate_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __mbstate_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __mbstate_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t > ( ) ) ) . __count as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t ) , "::" , stringify ! ( __count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t > ( ) ) ) . __value as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t ) , "::" , stringify ! ( __value ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _G_fpos_t { pub __pos : __off_t , pub __state : __mbstate_t , } # [ test ] fn bindgen_test_layout__G_fpos_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _G_fpos_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( _G_fpos_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _G_fpos_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _G_fpos_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos_t > ( ) ) ) . __pos as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos_t ) , "::" , stringify ! ( __pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos_t > ( ) ) ) . __state as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos_t ) , "::" , stringify ! ( __state ) ) ) ; } pub type __fpos_t = _G_fpos_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _G_fpos64_t { pub __pos : __off64_t , pub __state : __mbstate_t , } # [ test ] fn bindgen_test_layout__G_fpos64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _G_fpos64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( _G_fpos64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _G_fpos64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _G_fpos64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos64_t > ( ) ) ) . __pos as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos64_t ) , "::" , stringify ! ( __pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos64_t > ( ) ) ) . __state as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos64_t ) , "::" , stringify ! ( __state ) ) ) ; } pub type __fpos64_t = _G_fpos64_t ; pub type __FILE = _IO_FILE ; pub type FILE = _IO_FILE ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_marker { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_codecvt { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_wide_data { _unused : [ u8 ; 0 ] , } pub type _IO_lock_t = :: std :: os :: raw :: c_void ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_FILE { pub _flags : :: std :: os :: raw :: c_int , pub _IO_read_ptr : * mut :: std :: os :: raw :: c_char , pub _IO_read_end : * mut :: std :: os :: raw :: c_char , pub _IO_read_base : * mut :: std :: os :: raw :: c_char , pub _IO_write_base : * mut :: std :: os :: raw :: c_char , pub _IO_write_ptr : * mut :: std :: os :: raw :: c_char , pub _IO_write_end : * mut :: std :: os :: raw :: c_char , pub _IO_buf_base : * mut :: std :: os :: raw :: c_char , pub _IO_buf_end : * mut :: std :: os :: raw :: c_char , pub _IO_save_base : * mut :: std :: os :: raw :: c_char , pub _IO_backup_base : * mut :: std :: os :: raw :: c_char , pub _IO_save_end : * mut :: std :: os :: raw :: c_char , pub _markers : * mut _IO_marker , pub _chain : * mut _IO_FILE , pub _fileno : :: std :: os :: raw :: c_int , pub _flags2 : :: std :: os :: raw :: c_int , pub _old_offset : __off_t , pub _cur_column : :: std :: os :: raw :: c_ushort , pub _vtable_offset : :: std :: os :: raw :: c_schar , pub _shortbuf : [ :: std :: os :: raw :: c_char ; 1usize ] , pub _lock : * mut _IO_lock_t , pub _offset : __off64_t , pub _codecvt : * mut _IO_codecvt , pub _wide_data : * mut _IO_wide_data , pub _freeres_list : * mut _IO_FILE , pub _freeres_buf : * mut :: std :: os :: raw :: c_void , pub __pad5 : usize , pub _mode : :: std :: os :: raw :: c_int , pub _unused2 : [ :: std :: os :: raw :: c_char ; 20usize ] , } # [ test ] fn bindgen_test_layout__IO_FILE ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _IO_FILE > ( ) , 216usize , concat ! ( "Size of: " , stringify ! ( _IO_FILE ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _IO_FILE > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _IO_FILE ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _flags as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _flags ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_ptr as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_ptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_end as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_base as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_base as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_ptr as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_ptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_end as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_buf_base as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_buf_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_buf_end as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_buf_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_save_base as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_save_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_backup_base as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_backup_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_save_end as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_save_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _markers as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _markers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _chain as * const _ as usize } , 104usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _chain ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _fileno as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _fileno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _flags2 as * const _ as usize } , 116usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _flags2 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _old_offset as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _old_offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _cur_column as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _cur_column ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _vtable_offset as * const _ as usize } , 130usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _vtable_offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _shortbuf as * const _ as usize } , 131usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _shortbuf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _lock as * const _ as usize } , 136usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _lock ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _offset as * const _ as usize } , 144usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _codecvt as * const _ as usize } , 152usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _codecvt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _wide_data as * const _ as usize } , 160usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _wide_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _freeres_list as * const _ as usize } , 168usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _freeres_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _freeres_buf as * const _ as usize } , 176usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _freeres_buf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . __pad5 as * const _ as usize } , 184usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( __pad5 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _mode as * const _ as usize } , 192usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _mode ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _unused2 as * const _ as usize } , 196usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _unused2 ) ) ) ; } pub type fpos_t = __fpos_t ; extern "C" { # [ link_name = "\u{1}stdin" ] pub static mut stdin : * mut FILE ; } extern "C" { # [ link_name = "\u{1}stdout" ] pub static mut stdout : * mut FILE ; } extern "C" { # [ link_name = "\u{1}stderr" ] pub static mut stderr : * mut FILE ; } extern "C" { pub fn remove ( __filename : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn rename ( __old : * const :: std :: os :: raw :: c_char , __new : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn renameat ( __oldfd : :: std :: os :: raw :: c_int , __old : * const :: std :: os :: raw :: c_char , __newfd : :: std :: os :: raw :: c_int , __new : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fclose ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn tmpfile ( ) -> * mut FILE ; } extern "C" { pub fn tmpnam ( arg1 : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn tmpnam_r ( __s : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn tempnam ( __dir : * const :: std :: os :: raw :: c_char , __pfx : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn fflush ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fflush_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fopen ( __filename : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn freopen ( __filename : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char , __stream : * mut FILE ) -> * mut FILE ; } extern "C" { pub fn fdopen ( __fd : :: std :: os :: raw :: c_int , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn fmemopen ( __s : * mut :: std :: os :: raw :: c_void , __len : usize , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn open_memstream ( __bufloc : * mut * mut :: std :: os :: raw :: c_char , __sizeloc : * mut usize ) -> * mut FILE ; } extern "C" { pub fn setbuf ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn setvbuf ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char , __modes : :: std :: os :: raw :: c_int , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setbuffer ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char , __size : usize ) ; } extern "C" { pub fn setlinebuf ( __stream : * mut FILE ) ; } extern "C" { pub fn fprintf ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn printf ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sprintf ( __s : * mut :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vfprintf ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vprintf ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsprintf ( __s : * mut :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn snprintf ( __s : * mut :: std :: os :: raw :: c_char , __maxlen : :: std :: os :: raw :: c_ulong , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsnprintf ( __s : * mut :: std :: os :: raw :: c_char , __maxlen : :: std :: os :: raw :: c_ulong , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vdprintf ( __fd : :: std :: os :: raw :: c_int , __fmt : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn dprintf ( __fd : :: std :: os :: raw :: c_int , __fmt : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fscanf ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn scanf ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sscanf ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_fscanf" ] pub fn fscanf1 ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_scanf" ] pub fn scanf1 ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_sscanf" ] pub fn sscanf1 ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vfscanf ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vscanf ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsscanf ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vfscanf" ] pub fn vfscanf1 ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vscanf" ] pub fn vscanf1 ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vsscanf" ] pub fn vsscanf1 ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgetc ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getc ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getchar ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getc_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getchar_unlocked ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgetc_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fputc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putchar ( __c : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fputc_unlocked ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putc_unlocked ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putchar_unlocked ( __c : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getw ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putw ( __w : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgets ( __s : * mut :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __getdelim ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __delimiter : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn getdelim ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __delimiter : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn getline ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn fputs ( __s : * const :: std :: os :: raw :: c_char , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn puts ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ungetc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fread ( __ptr : * mut :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong , __n : :: std :: os :: raw :: c_ulong , __stream : * mut FILE ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn fwrite ( __ptr : * const :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong , __n : :: std :: os :: raw :: c_ulong , __s : * mut FILE ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn fread_unlocked ( __ptr : * mut :: std :: os :: raw :: c_void , __size : usize , __n : usize , __stream : * mut FILE ) -> usize ; } extern "C" { pub fn fwrite_unlocked ( __ptr : * const :: std :: os :: raw :: c_void , __size : usize , __n : usize , __stream : * mut FILE ) -> usize ; } extern "C" { pub fn fseek ( __stream : * mut FILE , __off : :: std :: os :: raw :: c_long , __whence : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ftell ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn rewind ( __stream : * mut FILE ) ; } extern "C" { pub fn fseeko ( __stream : * mut FILE , __off : __off_t , __whence : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ftello ( __stream : * mut FILE ) -> __off_t ; } extern "C" { pub fn fgetpos ( __stream : * mut FILE , __pos : * mut fpos_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fsetpos ( __stream : * mut FILE , __pos : * const fpos_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearerr ( __stream : * mut FILE ) ; } extern "C" { pub fn feof ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ferror ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearerr_unlocked ( __stream : * mut FILE ) ; } extern "C" { pub fn feof_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ferror_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn perror ( __s : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn fileno ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fileno_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pclose ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn popen ( __command : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn ctermid ( __s : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn flockfile ( __stream : * mut FILE ) ; } extern "C" { pub fn ftrylockfile ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn funlockfile ( __stream : * mut FILE ) ; } extern "C" { pub fn __uflow ( arg1 : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn __overflow ( arg1 : * mut FILE , arg2 : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ks_tokaux_t { pub tab : [ u64 ; 4usize ] , pub sep : :: std :: os :: raw :: c_int , pub finished : :: std :: os :: raw :: c_int , pub p : * const :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout_ks_tokaux_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ks_tokaux_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( ks_tokaux_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ks_tokaux_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ks_tokaux_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . tab as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( tab ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . sep as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( sep ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . finished as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( finished ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . p as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( p ) ) ) ; } extern "C" { pub fn kvsprintf ( s : * mut kstring_t , fmt : * const :: std :: os :: raw :: c_char , ap : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ksprintf ( s : * mut kstring_t , fmt : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn kputd ( d : f64 , s : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ksplit_core ( s : * mut :: std :: os :: raw :: c_char , delimiter : :: std :: os :: raw :: c_int , _max : * mut :: std :: os :: raw :: c_int , _offsets : * mut * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn kstrstr ( str : * const :: std :: os :: raw :: c_char , pat : * const :: std :: os :: raw :: c_char , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn kstrnstr ( str : * const :: std :: os :: raw :: c_char , pat : * const :: std :: os :: raw :: c_char , n : :: std :: os :: raw :: c_int , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn kmemmem ( _str : * const :: std :: os :: raw :: c_void , n : :: std :: os :: raw :: c_int , _pat : * const :: std :: os :: raw :: c_void , m : :: std :: os :: raw :: c_int , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn kstrtok ( str : * const :: std :: os :: raw :: c_char , sep : * const :: std :: os :: raw :: c_char , aux : * mut ks_tokaux_t ) -> * mut :: std :: os :: raw :: c_char ; } pub type kgets_func = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_char , arg2 : :: std :: os :: raw :: c_int , arg3 : * mut :: std :: os :: raw :: c_void ) -> * mut :: std :: os :: raw :: c_char > ; extern "C" { pub fn kgetline ( s : * mut kstring_t , fgets : kgets_func , fp : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } pub type uint16_u = u16 ; pub type uint32_u = u32 ; pub type uint64_u = u64 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_hrec_t { pub type_ : :: std :: os :: raw :: c_int , pub key : * mut :: std :: os :: raw :: c_char , pub value : * mut :: std :: os :: raw :: c_char , pub nkeys : :: std :: os :: raw :: c_int , pub keys : * mut * mut :: std :: os :: raw :: c_char , pub vals : * mut * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout_bcf_hrec_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_hrec_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( bcf_hrec_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_hrec_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_hrec_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . type_ as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . key as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . value as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( value ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . nkeys as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( nkeys ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . keys as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( keys ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . vals as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( vals ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_idinfo_t { pub info : [ u32 ; 3usize ] , pub hrec : [ * mut bcf_hrec_t ; 3usize ] , pub id : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_bcf_idinfo_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_idinfo_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( bcf_idinfo_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_idinfo_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_idinfo_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . info as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( info ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . hrec as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( hrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . id as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( id ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_idpair_t { pub key : * const :: std :: os :: raw :: c_char , pub val : * const bcf_idinfo_t , } # [ test ] fn bindgen_test_layout_bcf_idpair_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_idpair_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( bcf_idpair_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_idpair_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_idpair_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idpair_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idpair_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idpair_t > ( ) ) ) . val as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idpair_t ) , "::" , stringify ! ( val ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_hdr_t { pub n : [ i32 ; 3usize ] , pub id : [ * mut bcf_idpair_t ; 3usize ] , pub dict : [ * mut :: std :: os :: raw :: c_void ; 3usize ] , pub samples : * mut * mut :: std :: os :: raw :: c_char , pub hrec : * mut * mut bcf_hrec_t , pub nhrec : :: std :: os :: raw :: c_int , pub dirty : :: std :: os :: raw :: c_int , pub ntransl : :: std :: os :: raw :: c_int , pub transl : [ * mut :: std :: os :: raw :: c_int ; 2usize ] , pub nsamples_ori : :: std :: os :: raw :: c_int , pub keep_samples : * mut u8 , pub mem : kstring_t , pub m : [ i32 ; 3usize ] , } # [ test ] fn bindgen_test_layout_bcf_hdr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_hdr_t > ( ) , 168usize , concat ! ( "Size of: " , stringify ! ( bcf_hdr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_hdr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_hdr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . id as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . dict as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( dict ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . samples as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( samples ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . hrec as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( hrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . nhrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( nhrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . dirty as * const _ as usize } , 84usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( dirty ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . ntransl as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( ntransl ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . transl as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( transl ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . nsamples_ori as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( nsamples_ori ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . keep_samples as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( keep_samples ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . mem as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( mem ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . m as * const _ as usize } , 152usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( m ) ) ) ; } extern "C" { # [ link_name = "\u{1}bcf_type_shift" ] pub static mut bcf_type_shift : [ u8 ; 0usize ] ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct variant_t { pub type_ : :: std :: os :: raw :: c_int , pub n : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_variant_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < variant_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( variant_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < variant_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( variant_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < variant_t > ( ) ) ) . type_ as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( variant_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < variant_t > ( ) ) ) . n as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( variant_t ) , "::" , stringify ! ( n ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_fmt_t { pub id : :: std :: os :: raw :: c_int , pub n : :: std :: os :: raw :: c_int , pub size : :: std :: os :: raw :: c_int , pub type_ : :: std :: os :: raw :: c_int , pub p : * mut u8 , pub p_len : u32 , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , } # [ test ] fn bindgen_test_layout_bcf_fmt_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_fmt_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( bcf_fmt_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_fmt_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_fmt_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . id as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . n as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . size as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . type_ as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . p as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( p ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . p_len as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( p_len ) ) ) ; } impl bcf_fmt_t { # [ inline ] pub fn p_off ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 31u8 ) as u32 ) } } # [ inline ] pub fn set_p_off ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 31u8 , val as u64 ) } } # [ inline ] pub fn p_free ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 31usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_p_free ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 31usize , 1u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( p_off : u32 , p_free : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 31u8 , { let p_off : u32 = unsafe { :: std :: mem :: transmute ( p_off ) } ; p_off as u64 } ) ; __bindgen_bitfield_unit . set ( 31usize , 1u8 , { let p_free : u32 = unsafe { :: std :: mem :: transmute ( p_free ) } ; p_free as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_info_t { pub key : :: std :: os :: raw :: c_int , pub type_ : :: std :: os :: raw :: c_int , pub len : :: std :: os :: raw :: c_int , pub v1 : bcf_info_t__bindgen_ty_1 , pub vptr : * mut u8 , pub vptr_len : u32 , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0277]: `bam_pileup_cd` doesn't implement `Debug` [INFO] [stdout] --> /opt/rustwide/target/debug/build/rust-htslib-255363f3d11bfb10/out/bindings.rs:3:226197 [INFO] [stdout] | [INFO] [stdout] 3 | ... ( Debug , Copy , Clone ) ] pub struct bam_pileup1_t { pub b : * mut bam1_t , pub qpos : i32 , pub indel : :: std :: os :: raw :: c_int , pub level : :: std :: os :: raw :: c_int , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub cd : bam_pileup_cd , ... [INFO] [stdout] | ----- in this derive macro expansion ^^^^^^^^^^^^^^^^^^^^^^ `bam_pileup_cd` cannot be formatted using `{:?}` [INFO] [stdout] | [INFO] [stdout] = help: the trait `Debug` is not implemented for `bam_pileup_cd`, which is required by `&bam_pileup_cd: Debug` [INFO] [stdout] = note: add `#[derive(Debug)]` to `bam_pileup_cd` or manually `impl Debug for bam_pileup_cd` [INFO] [stdout] = note: this error originates in the derive macro `Debug` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] help: consider annotating `bam_pileup_cd` with `#[derive(Debug)]` [INFO] [stdout] | [INFO] [stdout] 3 | # [ repr ( C ) ] # [ derive ( Copy , Clone , Debug , Default , Eq , Hash , Ord , PartialEq , PartialOrd ) ] pub struct __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { storage : Storage , align : [ Align ; 0 ] , } impl < Storage , Align > __BindgenBitfieldUnit < Storage , Align > where Storage : AsRef < [ u8 ] > + AsMut < [ u8 ] >, { # [ inline ] pub fn new ( storage : Storage ) -> Self { Self { storage , align : [ ] , } } # [ inline ] pub fn get_bit ( & self , index : usize ) -> bool { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = self . storage . as_ref ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; byte & mask == mask } # [ inline ] pub fn set_bit ( & mut self , index : usize , val : bool ) { debug_assert ! ( index / 8 < self . storage . as_ref ( ) . len ( ) ) ; let byte_index = index / 8 ; let byte = & mut self . storage . as_mut ( ) [ byte_index ] ; let bit_index = if cfg ! ( target_endian = "big" ) { 7 - ( index % 8 ) } else { index % 8 } ; let mask = 1 << bit_index ; if val { * byte |= mask ; } else { * byte &= ! mask ; } } # [ inline ] pub fn get ( & self , bit_offset : usize , bit_width : u8 ) -> u64 { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; let mut val = 0 ; for i in 0 .. ( bit_width as usize ) { if self . get_bit ( i + bit_offset ) { let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; val |= 1 << index ; } } val } # [ inline ] pub fn set ( & mut self , bit_offset : usize , bit_width : u8 , val : u64 ) { debug_assert ! ( bit_width <= 64 ) ; debug_assert ! ( bit_offset / 8 < self . storage . as_ref ( ) . len ( ) ) ; debug_assert ! ( ( bit_offset + ( bit_width as usize ) ) / 8 <= self . storage . as_ref ( ) . len ( ) ) ; for i in 0 .. ( bit_width as usize ) { let mask = 1 << i ; let val_bit_is_set = val & mask == mask ; let index = if cfg ! ( target_endian = "big" ) { bit_width as usize - 1 - i } else { i } ; self . set_bit ( index + bit_offset , val_bit_is_set ) ; } } } pub const _STDINT_H : u32 = 1 ; pub const _FEATURES_H : u32 = 1 ; pub const _DEFAULT_SOURCE : u32 = 1 ; pub const __GLIBC_USE_ISOC2X : u32 = 0 ; pub const __USE_ISOC11 : u32 = 1 ; pub const __USE_ISOC99 : u32 = 1 ; pub const __USE_ISOC95 : u32 = 1 ; pub const __USE_POSIX_IMPLICITLY : u32 = 1 ; pub const _POSIX_SOURCE : u32 = 1 ; pub const _POSIX_C_SOURCE : u32 = 200809 ; pub const __USE_POSIX : u32 = 1 ; pub const __USE_POSIX2 : u32 = 1 ; pub const __USE_POSIX199309 : u32 = 1 ; pub const __USE_POSIX199506 : u32 = 1 ; pub const __USE_XOPEN2K : u32 = 1 ; pub const __USE_XOPEN2K8 : u32 = 1 ; pub const _ATFILE_SOURCE : u32 = 1 ; pub const __WORDSIZE : u32 = 64 ; pub const __WORDSIZE_TIME64_COMPAT32 : u32 = 1 ; pub const __SYSCALL_WORDSIZE : u32 = 64 ; pub const __TIMESIZE : u32 = 64 ; pub const __USE_MISC : u32 = 1 ; pub const __USE_ATFILE : u32 = 1 ; pub const __USE_FORTIFY_LEVEL : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_GETS : u32 = 0 ; pub const __GLIBC_USE_DEPRECATED_SCANF : u32 = 0 ; pub const _STDC_PREDEF_H : u32 = 1 ; pub const __STDC_IEC_559__ : u32 = 1 ; pub const __STDC_IEC_60559_BFP__ : u32 = 201404 ; pub const __STDC_IEC_559_COMPLEX__ : u32 = 1 ; pub const __STDC_IEC_60559_COMPLEX__ : u32 = 201404 ; pub const __STDC_ISO_10646__ : u32 = 201706 ; pub const __GNU_LIBRARY__ : u32 = 6 ; pub const __GLIBC__ : u32 = 2 ; pub const __GLIBC_MINOR__ : u32 = 35 ; pub const _SYS_CDEFS_H : u32 = 1 ; pub const __glibc_c99_flexarr_available : u32 = 1 ; pub const __LDOUBLE_REDIRECTS_TO_FLOAT128_ABI : u32 = 0 ; pub const __HAVE_GENERIC_SELECTION : u32 = 1 ; pub const __GLIBC_USE_LIB_EXT2 : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_BFP_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_FUNCS_EXT_C2X : u32 = 0 ; pub const __GLIBC_USE_IEC_60559_TYPES_EXT : u32 = 0 ; pub const _BITS_TYPES_H : u32 = 1 ; pub const _BITS_TYPESIZES_H : u32 = 1 ; pub const __OFF_T_MATCHES_OFF64_T : u32 = 1 ; pub const __INO_T_MATCHES_INO64_T : u32 = 1 ; pub const __RLIM_T_MATCHES_RLIM64_T : u32 = 1 ; pub const __STATFS_MATCHES_STATFS64 : u32 = 1 ; pub const __KERNEL_OLD_TIMEVAL_MATCHES_TIMEVAL64 : u32 = 1 ; pub const __FD_SETSIZE : u32 = 1024 ; pub const _BITS_TIME64_H : u32 = 1 ; pub const _BITS_WCHAR_H : u32 = 1 ; pub const _BITS_STDINT_INTN_H : u32 = 1 ; pub const _BITS_STDINT_UINTN_H : u32 = 1 ; pub const INT8_MIN : i32 = -128 ; pub const INT16_MIN : i32 = -32768 ; pub const INT32_MIN : i32 = -2147483648 ; pub const INT8_MAX : u32 = 127 ; pub const INT16_MAX : u32 = 32767 ; pub const INT32_MAX : u32 = 2147483647 ; pub const UINT8_MAX : u32 = 255 ; pub const UINT16_MAX : u32 = 65535 ; pub const UINT32_MAX : u32 = 4294967295 ; pub const INT_LEAST8_MIN : i32 = -128 ; pub const INT_LEAST16_MIN : i32 = -32768 ; pub const INT_LEAST32_MIN : i32 = -2147483648 ; pub const INT_LEAST8_MAX : u32 = 127 ; pub const INT_LEAST16_MAX : u32 = 32767 ; pub const INT_LEAST32_MAX : u32 = 2147483647 ; pub const UINT_LEAST8_MAX : u32 = 255 ; pub const UINT_LEAST16_MAX : u32 = 65535 ; pub const UINT_LEAST32_MAX : u32 = 4294967295 ; pub const INT_FAST8_MIN : i32 = -128 ; pub const INT_FAST16_MIN : i64 = -9223372036854775808 ; pub const INT_FAST32_MIN : i64 = -9223372036854775808 ; pub const INT_FAST8_MAX : u32 = 127 ; pub const INT_FAST16_MAX : u64 = 9223372036854775807 ; pub const INT_FAST32_MAX : u64 = 9223372036854775807 ; pub const UINT_FAST8_MAX : u32 = 255 ; pub const UINT_FAST16_MAX : i32 = -1 ; pub const UINT_FAST32_MAX : i32 = -1 ; pub const INTPTR_MIN : i64 = -9223372036854775808 ; pub const INTPTR_MAX : u64 = 9223372036854775807 ; pub const UINTPTR_MAX : i32 = -1 ; pub const PTRDIFF_MIN : i64 = -9223372036854775808 ; pub const PTRDIFF_MAX : u64 = 9223372036854775807 ; pub const SIG_ATOMIC_MIN : i32 = -2147483648 ; pub const SIG_ATOMIC_MAX : u32 = 2147483647 ; pub const SIZE_MAX : i32 = -1 ; pub const WINT_MIN : u32 = 0 ; pub const WINT_MAX : u32 = 4294967295 ; pub const HTS_IDX_NOCOOR : i32 = -2 ; pub const HTS_IDX_START : i32 = -3 ; pub const HTS_IDX_REST : i32 = -4 ; pub const HTS_IDX_NONE : i32 = -5 ; pub const HTS_FMT_CSI : u32 = 0 ; pub const HTS_FMT_BAI : u32 = 1 ; pub const HTS_FMT_TBI : u32 = 2 ; pub const HTS_FMT_CRAI : u32 = 3 ; pub const HTS_PARSE_THOUSANDS_SEP : u32 = 1 ; pub const FT_UNKN : u32 = 0 ; pub const FT_GZ : u32 = 1 ; pub const FT_VCF : u32 = 2 ; pub const FT_VCF_GZ : u32 = 3 ; pub const FT_BCF : u32 = 4 ; pub const FT_BCF_GZ : u32 = 5 ; pub const FT_STDIN : u32 = 8 ; pub const _LIBC_LIMITS_H_ : u32 = 1 ; pub const MB_LEN_MAX : u32 = 16 ; pub const _BITS_POSIX1_LIM_H : u32 = 1 ; pub const _POSIX_AIO_LISTIO_MAX : u32 = 2 ; pub const _POSIX_AIO_MAX : u32 = 1 ; pub const _POSIX_ARG_MAX : u32 = 4096 ; pub const _POSIX_CHILD_MAX : u32 = 25 ; pub const _POSIX_DELAYTIMER_MAX : u32 = 32 ; pub const _POSIX_HOST_NAME_MAX : u32 = 255 ; pub const _POSIX_LINK_MAX : u32 = 8 ; pub const _POSIX_LOGIN_NAME_MAX : u32 = 9 ; pub const _POSIX_MAX_CANON : u32 = 255 ; pub const _POSIX_MAX_INPUT : u32 = 255 ; pub const _POSIX_MQ_OPEN_MAX : u32 = 8 ; pub const _POSIX_MQ_PRIO_MAX : u32 = 32 ; pub const _POSIX_NAME_MAX : u32 = 14 ; pub const _POSIX_NGROUPS_MAX : u32 = 8 ; pub const _POSIX_OPEN_MAX : u32 = 20 ; pub const _POSIX_PATH_MAX : u32 = 256 ; pub const _POSIX_PIPE_BUF : u32 = 512 ; pub const _POSIX_RE_DUP_MAX : u32 = 255 ; pub const _POSIX_RTSIG_MAX : u32 = 8 ; pub const _POSIX_SEM_NSEMS_MAX : u32 = 256 ; pub const _POSIX_SEM_VALUE_MAX : u32 = 32767 ; pub const _POSIX_SIGQUEUE_MAX : u32 = 32 ; pub const _POSIX_SSIZE_MAX : u32 = 32767 ; pub const _POSIX_STREAM_MAX : u32 = 8 ; pub const _POSIX_SYMLINK_MAX : u32 = 255 ; pub const _POSIX_SYMLOOP_MAX : u32 = 8 ; pub const _POSIX_TIMER_MAX : u32 = 32 ; pub const _POSIX_TTY_NAME_MAX : u32 = 9 ; pub const _POSIX_TZNAME_MAX : u32 = 6 ; pub const _POSIX_CLOCKRES_MIN : u32 = 20000000 ; pub const NR_OPEN : u32 = 1024 ; pub const NGROUPS_MAX : u32 = 65536 ; pub const ARG_MAX : u32 = 131072 ; pub const LINK_MAX : u32 = 127 ; pub const MAX_CANON : u32 = 255 ; pub const MAX_INPUT : u32 = 255 ; pub const NAME_MAX : u32 = 255 ; pub const PATH_MAX : u32 = 4096 ; pub const PIPE_BUF : u32 = 4096 ; pub const XATTR_NAME_MAX : u32 = 255 ; pub const XATTR_SIZE_MAX : u32 = 65536 ; pub const XATTR_LIST_MAX : u32 = 65536 ; pub const RTSIG_MAX : u32 = 32 ; pub const _POSIX_THREAD_KEYS_MAX : u32 = 128 ; pub const PTHREAD_KEYS_MAX : u32 = 1024 ; pub const _POSIX_THREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const PTHREAD_DESTRUCTOR_ITERATIONS : u32 = 4 ; pub const _POSIX_THREAD_THREADS_MAX : u32 = 64 ; pub const AIO_PRIO_DELTA_MAX : u32 = 20 ; pub const PTHREAD_STACK_MIN : u32 = 16384 ; pub const DELAYTIMER_MAX : u32 = 2147483647 ; pub const TTY_NAME_MAX : u32 = 32 ; pub const LOGIN_NAME_MAX : u32 = 256 ; pub const HOST_NAME_MAX : u32 = 64 ; pub const MQ_PRIO_MAX : u32 = 32768 ; pub const SEM_VALUE_MAX : u32 = 2147483647 ; pub const _BITS_POSIX2_LIM_H : u32 = 1 ; pub const _POSIX2_BC_BASE_MAX : u32 = 99 ; pub const _POSIX2_BC_DIM_MAX : u32 = 2048 ; pub const _POSIX2_BC_SCALE_MAX : u32 = 99 ; pub const _POSIX2_BC_STRING_MAX : u32 = 1000 ; pub const _POSIX2_COLL_WEIGHTS_MAX : u32 = 2 ; pub const _POSIX2_EXPR_NEST_MAX : u32 = 32 ; pub const _POSIX2_LINE_MAX : u32 = 2048 ; pub const _POSIX2_RE_DUP_MAX : u32 = 255 ; pub const _POSIX2_CHARCLASS_NAME_MAX : u32 = 14 ; pub const BC_BASE_MAX : u32 = 99 ; pub const BC_DIM_MAX : u32 = 2048 ; pub const BC_SCALE_MAX : u32 = 99 ; pub const BC_STRING_MAX : u32 = 1000 ; pub const COLL_WEIGHTS_MAX : u32 = 255 ; pub const EXPR_NEST_MAX : u32 = 32 ; pub const LINE_MAX : u32 = 2048 ; pub const CHARCLASS_NAME_MAX : u32 = 2048 ; pub const RE_DUP_MAX : u32 = 32767 ; pub const _ASSERT_H : u32 = 1 ; pub const _STDLIB_H : u32 = 1 ; pub const WNOHANG : u32 = 1 ; pub const WUNTRACED : u32 = 2 ; pub const WSTOPPED : u32 = 2 ; pub const WEXITED : u32 = 4 ; pub const WCONTINUED : u32 = 8 ; pub const WNOWAIT : u32 = 16777216 ; pub const __WNOTHREAD : u32 = 536870912 ; pub const __WALL : u32 = 1073741824 ; pub const __WCLONE : u32 = 2147483648 ; pub const __W_CONTINUED : u32 = 65535 ; pub const __WCOREFLAG : u32 = 128 ; pub const __HAVE_FLOAT128 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128 : u32 = 0 ; pub const __HAVE_FLOAT64X : u32 = 1 ; pub const __HAVE_FLOAT64X_LONG_DOUBLE : u32 = 1 ; pub const __HAVE_FLOAT16 : u32 = 0 ; pub const __HAVE_FLOAT32 : u32 = 1 ; pub const __HAVE_FLOAT64 : u32 = 1 ; pub const __HAVE_FLOAT32X : u32 = 1 ; pub const __HAVE_FLOAT128X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT16 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64 : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT32X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT64X : u32 = 0 ; pub const __HAVE_DISTINCT_FLOAT128X : u32 = 0 ; pub const __HAVE_FLOATN_NOT_TYPEDEF : u32 = 0 ; pub const __ldiv_t_defined : u32 = 1 ; pub const __lldiv_t_defined : u32 = 1 ; pub const RAND_MAX : u32 = 2147483647 ; pub const EXIT_FAILURE : u32 = 1 ; pub const EXIT_SUCCESS : u32 = 0 ; pub const _SYS_TYPES_H : u32 = 1 ; pub const __clock_t_defined : u32 = 1 ; pub const __clockid_t_defined : u32 = 1 ; pub const __time_t_defined : u32 = 1 ; pub const __timer_t_defined : u32 = 1 ; pub const __BIT_TYPES_DEFINED__ : u32 = 1 ; pub const _ENDIAN_H : u32 = 1 ; pub const _BITS_ENDIAN_H : u32 = 1 ; pub const __LITTLE_ENDIAN : u32 = 1234 ; pub const __BIG_ENDIAN : u32 = 4321 ; pub const __PDP_ENDIAN : u32 = 3412 ; pub const _BITS_ENDIANNESS_H : u32 = 1 ; pub const __BYTE_ORDER : u32 = 1234 ; pub const __FLOAT_WORD_ORDER : u32 = 1234 ; pub const LITTLE_ENDIAN : u32 = 1234 ; pub const BIG_ENDIAN : u32 = 4321 ; pub const PDP_ENDIAN : u32 = 3412 ; pub const BYTE_ORDER : u32 = 1234 ; pub const _BITS_BYTESWAP_H : u32 = 1 ; pub const _BITS_UINTN_IDENTITY_H : u32 = 1 ; pub const _SYS_SELECT_H : u32 = 1 ; pub const __sigset_t_defined : u32 = 1 ; pub const __timeval_defined : u32 = 1 ; pub const _STRUCT_TIMESPEC : u32 = 1 ; pub const FD_SETSIZE : u32 = 1024 ; pub const _BITS_PTHREADTYPES_COMMON_H : u32 = 1 ; pub const _THREAD_SHARED_TYPES_H : u32 = 1 ; pub const _BITS_PTHREADTYPES_ARCH_H : u32 = 1 ; pub const __SIZEOF_PTHREAD_MUTEX_T : u32 = 40 ; pub const __SIZEOF_PTHREAD_ATTR_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_RWLOCK_T : u32 = 56 ; pub const __SIZEOF_PTHREAD_BARRIER_T : u32 = 32 ; pub const __SIZEOF_PTHREAD_MUTEXATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_COND_T : u32 = 48 ; pub const __SIZEOF_PTHREAD_CONDATTR_T : u32 = 4 ; pub const __SIZEOF_PTHREAD_RWLOCKATTR_T : u32 = 8 ; pub const __SIZEOF_PTHREAD_BARRIERATTR_T : u32 = 4 ; pub const _THREAD_MUTEX_INTERNAL_H : u32 = 1 ; pub const __PTHREAD_MUTEX_HAVE_PREV : u32 = 1 ; pub const __have_pthread_attr_t : u32 = 1 ; pub const _ALLOCA_H : u32 = 1 ; pub const _STRING_H : u32 = 1 ; pub const _BITS_TYPES_LOCALE_T_H : u32 = 1 ; pub const _BITS_TYPES___LOCALE_T_H : u32 = 1 ; pub const _STRINGS_H : u32 = 1 ; pub const __GNUC_VA_LIST : u32 = 1 ; pub const _STDIO_H : u32 = 1 ; pub const _____fpos_t_defined : u32 = 1 ; pub const ____mbstate_t_defined : u32 = 1 ; pub const _____fpos64_t_defined : u32 = 1 ; pub const ____FILE_defined : u32 = 1 ; pub const __FILE_defined : u32 = 1 ; pub const __struct_FILE_defined : u32 = 1 ; pub const _IO_EOF_SEEN : u32 = 16 ; pub const _IO_ERR_SEEN : u32 = 32 ; pub const _IO_USER_LOCK : u32 = 32768 ; pub const _IOFBF : u32 = 0 ; pub const _IOLBF : u32 = 1 ; pub const _IONBF : u32 = 2 ; pub const BUFSIZ : u32 = 8192 ; pub const EOF : i32 = -1 ; pub const SEEK_SET : u32 = 0 ; pub const SEEK_CUR : u32 = 1 ; pub const SEEK_END : u32 = 2 ; pub const P_tmpdir : & 'static [ u8 ; 5usize ] = b"/tmp\0" ; pub const _BITS_STDIO_LIM_H : u32 = 1 ; pub const L_tmpnam : u32 = 20 ; pub const TMP_MAX : u32 = 238328 ; pub const FILENAME_MAX : u32 = 4096 ; pub const L_ctermid : u32 = 9 ; pub const FOPEN_MAX : u32 = 16 ; pub const HTS_ALLOW_UNALIGNED : u32 = 1 ; pub const BCF_HL_FLT : u32 = 0 ; pub const BCF_HL_INFO : u32 = 1 ; pub const BCF_HL_FMT : u32 = 2 ; pub const BCF_HL_CTG : u32 = 3 ; pub const BCF_HL_STR : u32 = 4 ; pub const BCF_HL_GEN : u32 = 5 ; pub const BCF_HT_FLAG : u32 = 0 ; pub const BCF_HT_INT : u32 = 1 ; pub const BCF_HT_REAL : u32 = 2 ; pub const BCF_HT_STR : u32 = 3 ; pub const BCF_VL_FIXED : u32 = 0 ; pub const BCF_VL_VAR : u32 = 1 ; pub const BCF_VL_A : u32 = 2 ; pub const BCF_VL_G : u32 = 3 ; pub const BCF_VL_R : u32 = 4 ; pub const BCF_DT_ID : u32 = 0 ; pub const BCF_DT_CTG : u32 = 1 ; pub const BCF_DT_SAMPLE : u32 = 2 ; pub const BCF_BT_NULL : u32 = 0 ; pub const BCF_BT_INT8 : u32 = 1 ; pub const BCF_BT_INT16 : u32 = 2 ; pub const BCF_BT_INT32 : u32 = 3 ; pub const BCF_BT_FLOAT : u32 = 5 ; pub const BCF_BT_CHAR : u32 = 7 ; pub const VCF_REF : u32 = 0 ; pub const VCF_SNP : u32 = 1 ; pub const VCF_MNP : u32 = 2 ; pub const VCF_INDEL : u32 = 4 ; pub const VCF_OTHER : u32 = 8 ; pub const VCF_BND : u32 = 16 ; pub const BCF1_DIRTY_ID : u32 = 1 ; pub const BCF1_DIRTY_ALS : u32 = 2 ; pub const BCF1_DIRTY_FLT : u32 = 4 ; pub const BCF1_DIRTY_INF : u32 = 8 ; pub const BCF_ERR_CTG_UNDEF : u32 = 1 ; pub const BCF_ERR_TAG_UNDEF : u32 = 2 ; pub const BCF_ERR_NCOLS : u32 = 4 ; pub const BCF_ERR_LIMITS : u32 = 8 ; pub const BCF_ERR_CHAR : u32 = 16 ; pub const BCF_ERR_CTG_INVALID : u32 = 32 ; pub const BCF_ERR_TAG_INVALID : u32 = 64 ; pub const BCF_UN_STR : u32 = 1 ; pub const BCF_UN_FLT : u32 = 2 ; pub const BCF_UN_INFO : u32 = 4 ; pub const BCF_UN_SHR : u32 = 7 ; pub const BCF_UN_FMT : u32 = 8 ; pub const BCF_UN_IND : u32 = 8 ; pub const BCF_UN_ALL : u32 = 15 ; pub const bcf_gt_missing : u32 = 0 ; pub const bcf_int8_vector_end : i32 = -127 ; pub const bcf_int16_vector_end : i32 = -32767 ; pub const bcf_int32_vector_end : i32 = -2147483647 ; pub const bcf_str_vector_end : u32 = 0 ; pub const bcf_int8_missing : i32 = -128 ; pub const bcf_int16_missing : i32 = -32768 ; pub const bcf_int32_missing : i32 = -2147483648 ; pub const bcf_str_missing : u32 = 7 ; pub const SAM_FORMAT_VERSION : & 'static [ u8 ; 4usize ] = b"1.6\0" ; pub const BAM_CMATCH : u32 = 0 ; pub const BAM_CINS : u32 = 1 ; pub const BAM_CDEL : u32 = 2 ; pub const BAM_CREF_SKIP : u32 = 3 ; pub const BAM_CSOFT_CLIP : u32 = 4 ; pub const BAM_CHARD_CLIP : u32 = 5 ; pub const BAM_CPAD : u32 = 6 ; pub const BAM_CEQUAL : u32 = 7 ; pub const BAM_CDIFF : u32 = 8 ; pub const BAM_CBACK : u32 = 9 ; pub const BAM_CIGAR_STR : & 'static [ u8 ; 11usize ] = b"MIDNSHP=XB\0" ; pub const BAM_CIGAR_SHIFT : u32 = 4 ; pub const BAM_CIGAR_MASK : u32 = 15 ; pub const BAM_CIGAR_TYPE : u32 = 246183 ; pub const BAM_FPAIRED : u32 = 1 ; pub const BAM_FPROPER_PAIR : u32 = 2 ; pub const BAM_FUNMAP : u32 = 4 ; pub const BAM_FMUNMAP : u32 = 8 ; pub const BAM_FREVERSE : u32 = 16 ; pub const BAM_FMREVERSE : u32 = 32 ; pub const BAM_FREAD1 : u32 = 64 ; pub const BAM_FREAD2 : u32 = 128 ; pub const BAM_FSECONDARY : u32 = 256 ; pub const BAM_FQCFAIL : u32 = 512 ; pub const BAM_FDUP : u32 = 1024 ; pub const BAM_FSUPPLEMENTARY : u32 = 2048 ; pub const MAX_MEM_LEVEL : u32 = 9 ; pub const MAX_WBITS : u32 = 15 ; pub const _UNISTD_H : u32 = 1 ; pub const _POSIX_VERSION : u32 = 200809 ; pub const __POSIX2_THIS_VERSION : u32 = 200809 ; pub const _POSIX2_VERSION : u32 = 200809 ; pub const _POSIX2_C_VERSION : u32 = 200809 ; pub const _POSIX2_C_BIND : u32 = 200809 ; pub const _POSIX2_C_DEV : u32 = 200809 ; pub const _POSIX2_SW_DEV : u32 = 200809 ; pub const _POSIX2_LOCALEDEF : u32 = 200809 ; pub const _XOPEN_VERSION : u32 = 700 ; pub const _XOPEN_XCU_VERSION : u32 = 4 ; pub const _XOPEN_XPG2 : u32 = 1 ; pub const _XOPEN_XPG3 : u32 = 1 ; pub const _XOPEN_XPG4 : u32 = 1 ; pub const _XOPEN_UNIX : u32 = 1 ; pub const _XOPEN_ENH_I18N : u32 = 1 ; pub const _XOPEN_LEGACY : u32 = 1 ; pub const _BITS_POSIX_OPT_H : u32 = 1 ; pub const _POSIX_JOB_CONTROL : u32 = 1 ; pub const _POSIX_SAVED_IDS : u32 = 1 ; pub const _POSIX_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_SYNCHRONIZED_IO : u32 = 200809 ; pub const _POSIX_FSYNC : u32 = 200809 ; pub const _POSIX_MAPPED_FILES : u32 = 200809 ; pub const _POSIX_MEMLOCK : u32 = 200809 ; pub const _POSIX_MEMLOCK_RANGE : u32 = 200809 ; pub const _POSIX_MEMORY_PROTECTION : u32 = 200809 ; pub const _POSIX_CHOWN_RESTRICTED : u32 = 0 ; pub const _POSIX_VDISABLE : u8 = 0u8 ; pub const _POSIX_NO_TRUNC : u32 = 1 ; pub const _XOPEN_REALTIME : u32 = 1 ; pub const _XOPEN_REALTIME_THREADS : u32 = 1 ; pub const _XOPEN_SHM : u32 = 1 ; pub const _POSIX_THREADS : u32 = 200809 ; pub const _POSIX_REENTRANT_FUNCTIONS : u32 = 1 ; pub const _POSIX_THREAD_SAFE_FUNCTIONS : u32 = 200809 ; pub const _POSIX_THREAD_PRIORITY_SCHEDULING : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKSIZE : u32 = 200809 ; pub const _POSIX_THREAD_ATTR_STACKADDR : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_PRIO_PROTECT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_INHERIT : u32 = 200809 ; pub const _POSIX_THREAD_ROBUST_PRIO_PROTECT : i32 = -1 ; pub const _POSIX_SEMAPHORES : u32 = 200809 ; pub const _POSIX_REALTIME_SIGNALS : u32 = 200809 ; pub const _POSIX_ASYNCHRONOUS_IO : u32 = 200809 ; pub const _POSIX_ASYNC_IO : u32 = 1 ; pub const _LFS_ASYNCHRONOUS_IO : u32 = 1 ; pub const _POSIX_PRIORITIZED_IO : u32 = 200809 ; pub const _LFS64_ASYNCHRONOUS_IO : u32 = 1 ; pub const _LFS_LARGEFILE : u32 = 1 ; pub const _LFS64_LARGEFILE : u32 = 1 ; pub const _LFS64_STDIO : u32 = 1 ; pub const _POSIX_SHARED_MEMORY_OBJECTS : u32 = 200809 ; pub const _POSIX_CPUTIME : u32 = 0 ; pub const _POSIX_THREAD_CPUTIME : u32 = 0 ; pub const _POSIX_REGEXP : u32 = 1 ; pub const _POSIX_READER_WRITER_LOCKS : u32 = 200809 ; pub const _POSIX_SHELL : u32 = 1 ; pub const _POSIX_TIMEOUTS : u32 = 200809 ; pub const _POSIX_SPIN_LOCKS : u32 = 200809 ; pub const _POSIX_SPAWN : u32 = 200809 ; pub const _POSIX_TIMERS : u32 = 200809 ; pub const _POSIX_BARRIERS : u32 = 200809 ; pub const _POSIX_MESSAGE_PASSING : u32 = 200809 ; pub const _POSIX_THREAD_PROCESS_SHARED : u32 = 200809 ; pub const _POSIX_MONOTONIC_CLOCK : u32 = 0 ; pub const _POSIX_CLOCK_SELECTION : u32 = 200809 ; pub const _POSIX_ADVISORY_INFO : u32 = 200809 ; pub const _POSIX_IPV6 : u32 = 200809 ; pub const _POSIX_RAW_SOCKETS : u32 = 200809 ; pub const _POSIX2_CHAR_TERM : u32 = 200809 ; pub const _POSIX_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_THREAD_SPORADIC_SERVER : i32 = -1 ; pub const _POSIX_TRACE : i32 = -1 ; pub const _POSIX_TRACE_EVENT_FILTER : i32 = -1 ; pub const _POSIX_TRACE_INHERIT : i32 = -1 ; pub const _POSIX_TRACE_LOG : i32 = -1 ; pub const _POSIX_TYPED_MEMORY_OBJECTS : i32 = -1 ; pub const _POSIX_V7_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V6_LPBIG_OFFBIG : i32 = -1 ; pub const _XBS5_LPBIG_OFFBIG : i32 = -1 ; pub const _POSIX_V7_LP64_OFF64 : u32 = 1 ; pub const _POSIX_V6_LP64_OFF64 : u32 = 1 ; pub const _XBS5_LP64_OFF64 : u32 = 1 ; pub const __ILP32_OFF32_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFF32_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __ILP32_OFFBIG_CFLAGS : & 'static [ u8 ; 48usize ] = b"-m32 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64\0" ; pub const __ILP32_OFFBIG_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m32\0" ; pub const __LP64_OFF64_CFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const __LP64_OFF64_LDFLAGS : & 'static [ u8 ; 5usize ] = b"-m64\0" ; pub const STDIN_FILENO : u32 = 0 ; pub const STDOUT_FILENO : u32 = 1 ; pub const STDERR_FILENO : u32 = 2 ; pub const R_OK : u32 = 4 ; pub const W_OK : u32 = 2 ; pub const X_OK : u32 = 1 ; pub const F_OK : u32 = 0 ; pub const L_SET : u32 = 0 ; pub const L_INCR : u32 = 1 ; pub const L_XTND : u32 = 2 ; pub const _GETOPT_POSIX_H : u32 = 1 ; pub const _GETOPT_CORE_H : u32 = 1 ; pub const F_ULOCK : u32 = 0 ; pub const F_LOCK : u32 = 1 ; pub const F_TLOCK : u32 = 2 ; pub const F_TEST : u32 = 3 ; pub const ZLIB_VERSION : & 'static [ u8 ; 7usize ] = b"1.2.11\0" ; pub const ZLIB_VERNUM : u32 = 4784 ; pub const ZLIB_VER_MAJOR : u32 = 1 ; pub const ZLIB_VER_MINOR : u32 = 2 ; pub const ZLIB_VER_REVISION : u32 = 11 ; pub const ZLIB_VER_SUBREVISION : u32 = 0 ; pub const Z_NO_FLUSH : u32 = 0 ; pub const Z_PARTIAL_FLUSH : u32 = 1 ; pub const Z_SYNC_FLUSH : u32 = 2 ; pub const Z_FULL_FLUSH : u32 = 3 ; pub const Z_FINISH : u32 = 4 ; pub const Z_BLOCK : u32 = 5 ; pub const Z_TREES : u32 = 6 ; pub const Z_OK : u32 = 0 ; pub const Z_STREAM_END : u32 = 1 ; pub const Z_NEED_DICT : u32 = 2 ; pub const Z_ERRNO : i32 = -1 ; pub const Z_STREAM_ERROR : i32 = -2 ; pub const Z_DATA_ERROR : i32 = -3 ; pub const Z_MEM_ERROR : i32 = -4 ; pub const Z_BUF_ERROR : i32 = -5 ; pub const Z_VERSION_ERROR : i32 = -6 ; pub const Z_NO_COMPRESSION : u32 = 0 ; pub const Z_BEST_SPEED : u32 = 1 ; pub const Z_BEST_COMPRESSION : u32 = 9 ; pub const Z_DEFAULT_COMPRESSION : i32 = -1 ; pub const Z_FILTERED : u32 = 1 ; pub const Z_HUFFMAN_ONLY : u32 = 2 ; pub const Z_RLE : u32 = 3 ; pub const Z_FIXED : u32 = 4 ; pub const Z_DEFAULT_STRATEGY : u32 = 0 ; pub const Z_BINARY : u32 = 0 ; pub const Z_TEXT : u32 = 1 ; pub const Z_ASCII : u32 = 1 ; pub const Z_UNKNOWN : u32 = 2 ; pub const Z_DEFLATED : u32 = 8 ; pub const Z_NULL : u32 = 0 ; pub const BGZF_BLOCK_SIZE : u32 = 65280 ; pub const BGZF_MAX_BLOCK_SIZE : u32 = 65536 ; pub const BGZF_ERR_ZLIB : u32 = 1 ; pub const BGZF_ERR_HEADER : u32 = 2 ; pub const BGZF_ERR_IO : u32 = 4 ; pub const BGZF_ERR_MISUSE : u32 = 8 ; pub const BGZF_ERR_MT : u32 = 16 ; pub const BGZF_ERR_CRC : u32 = 32 ; pub const GT_HOM_RR : u32 = 0 ; pub const GT_HOM_AA : u32 = 1 ; pub const GT_HET_RA : u32 = 2 ; pub const GT_HET_AA : u32 = 3 ; pub const GT_HAPL_R : u32 = 4 ; pub const GT_HAPL_A : u32 = 5 ; pub const GT_UNKN : u32 = 6 ; pub const TBX_MAX_SHIFT : u32 = 31 ; pub const TBX_GENERIC : u32 = 0 ; pub const TBX_SAM : u32 = 1 ; pub const TBX_VCF : u32 = 2 ; pub const TBX_UCSC : u32 = 65536 ; pub const COLLAPSE_NONE : u32 = 0 ; pub const COLLAPSE_SNPS : u32 = 1 ; pub const COLLAPSE_INDELS : u32 = 2 ; pub const COLLAPSE_ANY : u32 = 4 ; pub const COLLAPSE_SOME : u32 = 8 ; pub const COLLAPSE_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_SNPS : u32 = 1 ; pub const BCF_SR_PAIR_INDELS : u32 = 2 ; pub const BCF_SR_PAIR_ANY : u32 = 4 ; pub const BCF_SR_PAIR_SOME : u32 = 8 ; pub const BCF_SR_PAIR_SNP_REF : u32 = 16 ; pub const BCF_SR_PAIR_INDEL_REF : u32 = 32 ; pub const BCF_SR_PAIR_EXACT : u32 = 64 ; pub const BCF_SR_PAIR_BOTH : u32 = 3 ; pub const BCF_SR_PAIR_BOTH_REF : u32 = 51 ; pub type wchar_t = :: std :: os :: raw :: c_int ; pub type __u_char = :: std :: os :: raw :: c_uchar ; pub type __u_short = :: std :: os :: raw :: c_ushort ; pub type __u_int = :: std :: os :: raw :: c_uint ; pub type __u_long = :: std :: os :: raw :: c_ulong ; pub type __int8_t = :: std :: os :: raw :: c_schar ; pub type __uint8_t = :: std :: os :: raw :: c_uchar ; pub type __int16_t = :: std :: os :: raw :: c_short ; pub type __uint16_t = :: std :: os :: raw :: c_ushort ; pub type __int32_t = :: std :: os :: raw :: c_int ; pub type __uint32_t = :: std :: os :: raw :: c_uint ; pub type __int64_t = :: std :: os :: raw :: c_long ; pub type __uint64_t = :: std :: os :: raw :: c_ulong ; pub type __int_least8_t = __int8_t ; pub type __uint_least8_t = __uint8_t ; pub type __int_least16_t = __int16_t ; pub type __uint_least16_t = __uint16_t ; pub type __int_least32_t = __int32_t ; pub type __uint_least32_t = __uint32_t ; pub type __int_least64_t = __int64_t ; pub type __uint_least64_t = __uint64_t ; pub type __quad_t = :: std :: os :: raw :: c_long ; pub type __u_quad_t = :: std :: os :: raw :: c_ulong ; pub type __intmax_t = :: std :: os :: raw :: c_long ; pub type __uintmax_t = :: std :: os :: raw :: c_ulong ; pub type __dev_t = :: std :: os :: raw :: c_ulong ; pub type __uid_t = :: std :: os :: raw :: c_uint ; pub type __gid_t = :: std :: os :: raw :: c_uint ; pub type __ino_t = :: std :: os :: raw :: c_ulong ; pub type __ino64_t = :: std :: os :: raw :: c_ulong ; pub type __mode_t = :: std :: os :: raw :: c_uint ; pub type __nlink_t = :: std :: os :: raw :: c_ulong ; pub type __off_t = :: std :: os :: raw :: c_long ; pub type __off64_t = :: std :: os :: raw :: c_long ; pub type __pid_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __fsid_t { pub __val : [ :: std :: os :: raw :: c_int ; 2usize ] , } # [ test ] fn bindgen_test_layout___fsid_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __fsid_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __fsid_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __fsid_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __fsid_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __fsid_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type __clock_t = :: std :: os :: raw :: c_long ; pub type __rlim_t = :: std :: os :: raw :: c_ulong ; pub type __rlim64_t = :: std :: os :: raw :: c_ulong ; pub type __id_t = :: std :: os :: raw :: c_uint ; pub type __time_t = :: std :: os :: raw :: c_long ; pub type __useconds_t = :: std :: os :: raw :: c_uint ; pub type __suseconds_t = :: std :: os :: raw :: c_long ; pub type __suseconds64_t = :: std :: os :: raw :: c_long ; pub type __daddr_t = :: std :: os :: raw :: c_int ; pub type __key_t = :: std :: os :: raw :: c_int ; pub type __clockid_t = :: std :: os :: raw :: c_int ; pub type __timer_t = * mut :: std :: os :: raw :: c_void ; pub type __blksize_t = :: std :: os :: raw :: c_long ; pub type __blkcnt_t = :: std :: os :: raw :: c_long ; pub type __blkcnt64_t = :: std :: os :: raw :: c_long ; pub type __fsblkcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsblkcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt_t = :: std :: os :: raw :: c_ulong ; pub type __fsfilcnt64_t = :: std :: os :: raw :: c_ulong ; pub type __fsword_t = :: std :: os :: raw :: c_long ; pub type __ssize_t = :: std :: os :: raw :: c_long ; pub type __syscall_slong_t = :: std :: os :: raw :: c_long ; pub type __syscall_ulong_t = :: std :: os :: raw :: c_ulong ; pub type __loff_t = __off64_t ; pub type __caddr_t = * mut :: std :: os :: raw :: c_char ; pub type __intptr_t = :: std :: os :: raw :: c_long ; pub type __socklen_t = :: std :: os :: raw :: c_uint ; pub type __sig_atomic_t = :: std :: os :: raw :: c_int ; pub type int_least8_t = __int_least8_t ; pub type int_least16_t = __int_least16_t ; pub type int_least32_t = __int_least32_t ; pub type int_least64_t = __int_least64_t ; pub type uint_least8_t = __uint_least8_t ; pub type uint_least16_t = __uint_least16_t ; pub type uint_least32_t = __uint_least32_t ; pub type uint_least64_t = __uint_least64_t ; pub type int_fast8_t = :: std :: os :: raw :: c_schar ; pub type int_fast16_t = :: std :: os :: raw :: c_long ; pub type int_fast32_t = :: std :: os :: raw :: c_long ; pub type int_fast64_t = :: std :: os :: raw :: c_long ; pub type uint_fast8_t = :: std :: os :: raw :: c_uchar ; pub type uint_fast16_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast32_t = :: std :: os :: raw :: c_ulong ; pub type uint_fast64_t = :: std :: os :: raw :: c_ulong ; pub type intmax_t = __intmax_t ; pub type uintmax_t = __uintmax_t ; pub const htsLogLevel_HTS_LOG_OFF : htsLogLevel = 0 ; pub const htsLogLevel_HTS_LOG_ERROR : htsLogLevel = 1 ; pub const htsLogLevel_HTS_LOG_WARNING : htsLogLevel = 3 ; pub const htsLogLevel_HTS_LOG_INFO : htsLogLevel = 4 ; pub const htsLogLevel_HTS_LOG_DEBUG : htsLogLevel = 5 ; pub const htsLogLevel_HTS_LOG_TRACE : htsLogLevel = 6 ; pub type htsLogLevel = u32 ; extern "C" { pub fn hts_set_log_level ( level : htsLogLevel ) ; } extern "C" { pub fn hts_get_log_level ( ) -> htsLogLevel ; } extern "C" { # [ link_name = "\u{1}hts_verbose" ] pub static mut hts_verbose : :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_log ( severity : htsLogLevel , context : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char , ... ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct cram_fd { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hFILE { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_tpool { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __kstring_t { pub l : usize , pub m : usize , pub s : * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout___kstring_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __kstring_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __kstring_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __kstring_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . l as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( l ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . m as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __kstring_t > ( ) ) ) . s as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __kstring_t ) , "::" , stringify ! ( s ) ) ) ; } pub type kstring_t = __kstring_t ; pub const htsFormatCategory_unknown_category : htsFormatCategory = 0 ; pub const htsFormatCategory_sequence_data : htsFormatCategory = 1 ; pub const htsFormatCategory_variant_data : htsFormatCategory = 2 ; pub const htsFormatCategory_index_file : htsFormatCategory = 3 ; pub const htsFormatCategory_region_list : htsFormatCategory = 4 ; pub const htsFormatCategory_category_maximum : htsFormatCategory = 32767 ; pub type htsFormatCategory = u32 ; pub const htsExactFormat_unknown_format : htsExactFormat = 0 ; pub const htsExactFormat_binary_format : htsExactFormat = 1 ; pub const htsExactFormat_text_format : htsExactFormat = 2 ; pub const htsExactFormat_sam : htsExactFormat = 3 ; pub const htsExactFormat_bam : htsExactFormat = 4 ; pub const htsExactFormat_bai : htsExactFormat = 5 ; pub const htsExactFormat_cram : htsExactFormat = 6 ; pub const htsExactFormat_crai : htsExactFormat = 7 ; pub const htsExactFormat_vcf : htsExactFormat = 8 ; pub const htsExactFormat_bcf : htsExactFormat = 9 ; pub const htsExactFormat_csi : htsExactFormat = 10 ; pub const htsExactFormat_gzi : htsExactFormat = 11 ; pub const htsExactFormat_tbi : htsExactFormat = 12 ; pub const htsExactFormat_bed : htsExactFormat = 13 ; pub const htsExactFormat_htsget : htsExactFormat = 14 ; pub const htsExactFormat_json : htsExactFormat = 14 ; pub const htsExactFormat_format_maximum : htsExactFormat = 32767 ; pub type htsExactFormat = u32 ; pub const htsCompression_no_compression : htsCompression = 0 ; pub const htsCompression_gzip : htsCompression = 1 ; pub const htsCompression_bgzf : htsCompression = 2 ; pub const htsCompression_custom : htsCompression = 3 ; pub const htsCompression_compression_maximum : htsCompression = 32767 ; pub type htsCompression = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat { pub category : htsFormatCategory , pub format : htsExactFormat , pub version : htsFormat__bindgen_ty_1 , pub compression : htsCompression , pub compression_level : :: std :: os :: raw :: c_short , pub specific : * mut :: std :: os :: raw :: c_void , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFormat__bindgen_ty_1 { pub major : :: std :: os :: raw :: c_short , pub minor : :: std :: os :: raw :: c_short , } # [ test ] fn bindgen_test_layout_htsFormat__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat__bindgen_ty_1 > ( ) , 2usize , concat ! ( "Alignment of " , stringify ! ( htsFormat__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . major as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( major ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat__bindgen_ty_1 > ( ) ) ) . minor as * const _ as usize } , 2usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat__bindgen_ty_1 ) , "::" , stringify ! ( minor ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFormat ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFormat > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFormat > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFormat ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . category as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( category ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . format as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( format ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . version as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( version ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . compression_level as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( compression_level ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFormat > ( ) ) ) . specific as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( htsFormat ) , "::" , stringify ! ( specific ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsFile { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub lineno : i64 , pub line : kstring_t , pub fn_ : * mut :: std :: os :: raw :: c_char , pub fn_aux : * mut :: std :: os :: raw :: c_char , pub fp : htsFile__bindgen_ty_1 , pub format : htsFormat , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union htsFile__bindgen_ty_1 { pub bgzf : * mut BGZF , pub cram : * mut cram_fd , pub hfile : * mut hFILE , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_htsFile__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . bgzf as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( bgzf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . cram as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( cram ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile__bindgen_ty_1 > ( ) ) ) . hfile as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsFile__bindgen_ty_1 ) , "::" , stringify ! ( hfile ) ) ) ; } # [ test ] fn bindgen_test_layout_htsFile ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsFile > ( ) , 96usize , concat ! ( "Size of: " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsFile > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsFile ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . lineno as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( lineno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . line as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( line ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_ as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fn_aux as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fn_aux ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . fp as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( fp ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsFile > ( ) ) ) . format as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( htsFile ) , "::" , stringify ! ( format ) ) ) ; } impl htsFile { # [ inline ] pub fn is_bin ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bin ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_write ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_write ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_be ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_be ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_bgzf ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_bgzf ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 5usize , 27u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 5usize , 27u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( is_bin : u32 , is_write : u32 , is_be : u32 , is_cram : u32 , is_bgzf : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let is_bin : u32 = unsafe { :: std :: mem :: transmute ( is_bin ) } ; is_bin as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let is_write : u32 = unsafe { :: std :: mem :: transmute ( is_write ) } ; is_write as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_be : u32 = unsafe { :: std :: mem :: transmute ( is_be ) } ; is_be as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 1u8 , { let is_bgzf : u32 = unsafe { :: std :: mem :: transmute ( is_bgzf ) } ; is_bgzf as u64 } ) ; __bindgen_bitfield_unit . set ( 5usize , 27u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct htsThreadPool { pub pool : * mut hts_tpool , pub qsize : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_htsThreadPool ( ) { assert_eq ! ( :: std :: mem :: size_of :: < htsThreadPool > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < htsThreadPool > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( htsThreadPool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . pool as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( pool ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < htsThreadPool > ( ) ) ) . qsize as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( htsThreadPool ) , "::" , stringify ! ( qsize ) ) ) ; } pub const sam_fields_SAM_QNAME : sam_fields = 1 ; pub const sam_fields_SAM_FLAG : sam_fields = 2 ; pub const sam_fields_SAM_RNAME : sam_fields = 4 ; pub const sam_fields_SAM_POS : sam_fields = 8 ; pub const sam_fields_SAM_MAPQ : sam_fields = 16 ; pub const sam_fields_SAM_CIGAR : sam_fields = 32 ; pub const sam_fields_SAM_RNEXT : sam_fields = 64 ; pub const sam_fields_SAM_PNEXT : sam_fields = 128 ; pub const sam_fields_SAM_TLEN : sam_fields = 256 ; pub const sam_fields_SAM_SEQ : sam_fields = 512 ; pub const sam_fields_SAM_QUAL : sam_fields = 1024 ; pub const sam_fields_SAM_AUX : sam_fields = 2048 ; pub const sam_fields_SAM_RGAUX : sam_fields = 4096 ; pub type sam_fields = u32 ; pub const hts_fmt_option_CRAM_OPT_DECODE_MD : hts_fmt_option = 0 ; pub const hts_fmt_option_CRAM_OPT_PREFIX : hts_fmt_option = 1 ; pub const hts_fmt_option_CRAM_OPT_VERBOSITY : hts_fmt_option = 2 ; pub const hts_fmt_option_CRAM_OPT_SEQS_PER_SLICE : hts_fmt_option = 3 ; pub const hts_fmt_option_CRAM_OPT_SLICES_PER_CONTAINER : hts_fmt_option = 4 ; pub const hts_fmt_option_CRAM_OPT_RANGE : hts_fmt_option = 5 ; pub const hts_fmt_option_CRAM_OPT_VERSION : hts_fmt_option = 6 ; pub const hts_fmt_option_CRAM_OPT_EMBED_REF : hts_fmt_option = 7 ; pub const hts_fmt_option_CRAM_OPT_IGNORE_MD5 : hts_fmt_option = 8 ; pub const hts_fmt_option_CRAM_OPT_REFERENCE : hts_fmt_option = 9 ; pub const hts_fmt_option_CRAM_OPT_MULTI_SEQ_PER_SLICE : hts_fmt_option = 10 ; pub const hts_fmt_option_CRAM_OPT_NO_REF : hts_fmt_option = 11 ; pub const hts_fmt_option_CRAM_OPT_USE_BZIP2 : hts_fmt_option = 12 ; pub const hts_fmt_option_CRAM_OPT_SHARED_REF : hts_fmt_option = 13 ; pub const hts_fmt_option_CRAM_OPT_NTHREADS : hts_fmt_option = 14 ; pub const hts_fmt_option_CRAM_OPT_THREAD_POOL : hts_fmt_option = 15 ; pub const hts_fmt_option_CRAM_OPT_USE_LZMA : hts_fmt_option = 16 ; pub const hts_fmt_option_CRAM_OPT_USE_RANS : hts_fmt_option = 17 ; pub const hts_fmt_option_CRAM_OPT_REQUIRED_FIELDS : hts_fmt_option = 18 ; pub const hts_fmt_option_CRAM_OPT_LOSSY_NAMES : hts_fmt_option = 19 ; pub const hts_fmt_option_CRAM_OPT_BASES_PER_SLICE : hts_fmt_option = 20 ; pub const hts_fmt_option_CRAM_OPT_STORE_MD : hts_fmt_option = 21 ; pub const hts_fmt_option_CRAM_OPT_STORE_NM : hts_fmt_option = 22 ; pub const hts_fmt_option_HTS_OPT_COMPRESSION_LEVEL : hts_fmt_option = 100 ; pub const hts_fmt_option_HTS_OPT_NTHREADS : hts_fmt_option = 101 ; pub const hts_fmt_option_HTS_OPT_THREAD_POOL : hts_fmt_option = 102 ; pub const hts_fmt_option_HTS_OPT_CACHE_SIZE : hts_fmt_option = 103 ; pub const hts_fmt_option_HTS_OPT_BLOCK_SIZE : hts_fmt_option = 104 ; pub type hts_fmt_option = u32 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_opt { pub arg : * mut :: std :: os :: raw :: c_char , pub opt : hts_fmt_option , pub val : hts_opt__bindgen_ty_1 , pub next : * mut hts_opt , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union hts_opt__bindgen_ty_1 { pub i : :: std :: os :: raw :: c_int , pub s : * mut :: std :: os :: raw :: c_char , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_hts_opt__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . i as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt__bindgen_ty_1 > ( ) ) ) . s as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt__bindgen_ty_1 ) , "::" , stringify ! ( s ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_opt ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_opt > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_opt > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . arg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( arg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . opt as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( opt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . val as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( val ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_opt > ( ) ) ) . next as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_opt ) , "::" , stringify ! ( next ) ) ) ; } extern "C" { pub fn hts_opt_add ( opts : * mut * mut hts_opt , c_arg : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_apply ( fp : * mut htsFile , opts : * mut hts_opt ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_opt_free ( opts : * mut hts_opt ) ; } extern "C" { pub fn hts_parse_format ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_parse_opt_list ( opt : * mut htsFormat , str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}seq_nt16_table" ] pub static mut seq_nt16_table : [ :: std :: os :: raw :: c_uchar ; 256usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_str" ] pub static mut seq_nt16_str : [ :: std :: os :: raw :: c_char ; 0usize ] ; } extern "C" { # [ link_name = "\u{1}seq_nt16_int" ] pub static mut seq_nt16_int : [ :: std :: os :: raw :: c_int ; 0usize ] ; } extern "C" { pub fn hts_version ( ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_detect_format ( fp : * mut hFILE , fmt : * mut htsFormat ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_format_description ( format : * const htsFormat ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_open ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_open_format ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char , fmt : * const htsFormat ) -> * mut htsFile ; } extern "C" { pub fn hts_hopen ( fp : * mut hFILE , fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char ) -> * mut htsFile ; } extern "C" { pub fn hts_close ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_get_format ( fp : * mut htsFile ) -> * const htsFormat ; } extern "C" { pub fn hts_format_file_extension ( format : * const htsFormat ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_opt ( fp : * mut htsFile , opt : hts_fmt_option , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_getline ( fp : * mut htsFile , delimiter : :: std :: os :: raw :: c_int , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_readlines ( fn_ : * const :: std :: os :: raw :: c_char , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_readlist ( fn_ : * const :: std :: os :: raw :: c_char , is_file : :: std :: os :: raw :: c_int , _n : * mut :: std :: os :: raw :: c_int ) -> * mut * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_set_threads ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_thread_pool ( fp : * mut htsFile , p : * mut htsThreadPool ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_set_cache_size ( fp : * mut htsFile , n : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_set_fai_filename ( fp : * mut htsFile , fn_aux : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_check_EOF ( fp : * mut htsFile ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __hts_idx_t { _unused : [ u8 ; 0 ] , } pub type hts_idx_t = __hts_idx_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair32_t { pub beg : u32 , pub end : u32 , } # [ test ] fn bindgen_test_layout_hts_pair32_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair32_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair32_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( hts_pair32_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . beg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair32_t > ( ) ) ) . end as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair32_t ) , "::" , stringify ! ( end ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_t { pub u : u64 , pub v : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_t ) , "::" , stringify ! ( v ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_pair64_max_t { pub u : u64 , pub v : u64 , pub max : u64 , } # [ test ] fn bindgen_test_layout_hts_pair64_max_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_pair64_max_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_pair64_max_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_pair64_max_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . u as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( u ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . v as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( v ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_pair64_max_t > ( ) ) ) . max as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_pair64_max_t ) , "::" , stringify ! ( max ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_reglist_t { pub reg : * const :: std :: os :: raw :: c_char , pub tid : :: std :: os :: raw :: c_int , pub intervals : * mut hts_pair32_t , pub count : u32 , pub min_beg : u32 , pub max_end : u32 , } # [ test ] fn bindgen_test_layout_hts_reglist_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_reglist_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_reglist_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_reglist_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . reg as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . tid as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . intervals as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( intervals ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . count as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . min_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( min_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_reglist_t > ( ) ) ) . max_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_reglist_t ) , "::" , stringify ! ( max_end ) ) ) ; } pub type hts_readrec_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut BGZF , data : * mut :: std :: os :: raw :: c_void , r : * mut :: std :: os :: raw :: c_void , tid : * mut :: std :: os :: raw :: c_int , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_seek_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void , offset : i64 , where_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int > ; pub type hts_tell_func = :: std :: option :: Option < unsafe extern "C" fn ( fp : * mut :: std :: os :: raw :: c_void ) -> i64 > ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub tid : :: std :: os :: raw :: c_int , pub beg : :: std :: os :: raw :: c_int , pub end : :: std :: os :: raw :: c_int , pub n_off : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub off : * mut hts_pair64_t , pub readrec : hts_readrec_func , pub bins : hts_itr_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_t__bindgen_ty_1 { pub n : :: std :: os :: raw :: c_int , pub m : :: std :: os :: raw :: c_int , pub a : * mut :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_hts_itr_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . m as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( m ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t__bindgen_ty_1 > ( ) ) ) . a as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t__bindgen_ty_1 ) , "::" , stringify ! ( a ) ) ) ; } # [ test ] fn bindgen_test_layout_hts_itr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_t > ( ) , 80usize , concat ! ( "Size of: " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . tid as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . beg as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . end as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . n_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_beg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_end as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . curr_off as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . readrec as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_t > ( ) ) ) . bins as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_t ) , "::" , stringify ! ( bins ) ) ) ; } impl hts_itr_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 29u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 29u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 29u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct aux_key_t { pub key : :: std :: os :: raw :: c_int , pub min_off : u64 , pub max_off : u64 , } # [ test ] fn bindgen_test_layout_aux_key_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < aux_key_t > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < aux_key_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( aux_key_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . min_off as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( min_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < aux_key_t > ( ) ) ) . max_off as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( aux_key_t ) , "::" , stringify ! ( max_off ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_itr_multi_t { pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , pub reg_list : * mut hts_reglist_t , pub n_reg : :: std :: os :: raw :: c_int , pub i : :: std :: os :: raw :: c_int , pub curr_tid : :: std :: os :: raw :: c_int , pub curr_intv : :: std :: os :: raw :: c_int , pub curr_beg : :: std :: os :: raw :: c_int , pub curr_end : :: std :: os :: raw :: c_int , pub curr_reg : :: std :: os :: raw :: c_int , pub off : * mut hts_pair64_max_t , pub n_off : :: std :: os :: raw :: c_int , pub curr_off : u64 , pub nocoor_off : u64 , pub readrec : hts_readrec_func , pub seek : hts_seek_func , pub tell : hts_tell_func , } # [ test ] fn bindgen_test_layout_hts_itr_multi_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < hts_itr_multi_t > ( ) , 104usize , concat ! ( "Size of: " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < hts_itr_multi_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( hts_itr_multi_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . reg_list as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( reg_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_reg as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . i as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_tid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_intv as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_intv ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_beg as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_beg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_end as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_reg as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_reg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . off as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . n_off as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( n_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . curr_off as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( curr_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . nocoor_off as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( nocoor_off ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . readrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( readrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . seek as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( seek ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < hts_itr_multi_t > ( ) ) ) . tell as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( hts_itr_multi_t ) , "::" , stringify ! ( tell ) ) ) ; } impl hts_itr_multi_t { # [ inline ] pub fn read_rest ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_read_rest ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 1u8 , val as u64 ) } } # [ inline ] pub fn finished ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 1usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_finished ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 1usize , 1u8 , val as u64 ) } } # [ inline ] pub fn is_cram ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 2usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_is_cram ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 2usize , 1u8 , val as u64 ) } } # [ inline ] pub fn nocoor ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 3usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_nocoor ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 3usize , 1u8 , val as u64 ) } } # [ inline ] pub fn dummy ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 4usize , 28u8 ) as u32 ) } } # [ inline ] pub fn set_dummy ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 4usize , 28u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( read_rest : u32 , finished : u32 , is_cram : u32 , nocoor : u32 , dummy : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 1u8 , { let read_rest : u32 = unsafe { :: std :: mem :: transmute ( read_rest ) } ; read_rest as u64 } ) ; __bindgen_bitfield_unit . set ( 1usize , 1u8 , { let finished : u32 = unsafe { :: std :: mem :: transmute ( finished ) } ; finished as u64 } ) ; __bindgen_bitfield_unit . set ( 2usize , 1u8 , { let is_cram : u32 = unsafe { :: std :: mem :: transmute ( is_cram ) } ; is_cram as u64 } ) ; __bindgen_bitfield_unit . set ( 3usize , 1u8 , { let nocoor : u32 = unsafe { :: std :: mem :: transmute ( nocoor ) } ; nocoor as u64 } ) ; __bindgen_bitfield_unit . set ( 4usize , 28u8 , { let dummy : u32 = unsafe { :: std :: mem :: transmute ( dummy ) } ; dummy as u64 } ) ; __bindgen_bitfield_unit } } extern "C" { pub fn hts_idx_init ( n : :: std :: os :: raw :: c_int , fmt : :: std :: os :: raw :: c_int , offset0 : u64 , min_shift : :: std :: os :: raw :: c_int , n_lvls : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_destroy ( idx : * mut hts_idx_t ) ; } extern "C" { pub fn hts_idx_push ( idx : * mut hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , offset : u64 , is_mapped : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_finish ( idx : * mut hts_idx_t , final_offset : u64 ) ; } extern "C" { pub fn hts_idx_save ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_save_as ( idx : * const hts_idx_t , fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_load ( fn_ : * const :: std :: os :: raw :: c_char , fmt : :: std :: os :: raw :: c_int ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_load2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn hts_idx_get_meta ( idx : * mut hts_idx_t , l_meta : * mut u32 ) -> * mut u8 ; } extern "C" { pub fn hts_idx_set_meta ( idx : * mut hts_idx_t , l_meta : u32 , meta : * mut u8 , is_copy : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_stat ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , mapped : * mut u64 , unmapped : * mut u64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_get_n_no_coor ( idx : * const hts_idx_t ) -> u64 ; } extern "C" { pub fn hts_parse_decimal ( str : * const :: std :: os :: raw :: c_char , strend : * mut * mut :: std :: os :: raw :: c_char , flags : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn hts_parse_reg ( str : * const :: std :: os :: raw :: c_char , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn hts_itr_query ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_destroy ( iter : * mut hts_itr_t ) ; } pub type hts_name2id_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int > ; pub type hts_id2name_f = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_void , arg2 : :: std :: os :: raw :: c_int ) -> * const :: std :: os :: raw :: c_char > ; pub type hts_itr_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int , readrec : hts_readrec_func ) -> * mut hts_itr_t > ; extern "C" { pub fn hts_itr_querys ( idx : * const hts_idx_t , reg : * const :: std :: os :: raw :: c_char , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_query : hts_itr_query_func , readrec : hts_readrec_func ) -> * mut hts_itr_t ; } extern "C" { pub fn hts_itr_next ( fp : * mut BGZF , iter : * mut hts_itr_t , r : * mut :: std :: os :: raw :: c_void , data : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_idx_seqnames ( idx : * const hts_idx_t , n : * mut :: std :: os :: raw :: c_int , getid : hts_id2name_f , hdr : * mut :: std :: os :: raw :: c_void ) -> * mut * const :: std :: os :: raw :: c_char ; } pub type hts_itr_multi_query_func = :: std :: option :: Option < unsafe extern "C" fn ( idx : * const hts_idx_t , itr : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t > ; extern "C" { pub fn hts_itr_multi_bam ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_cram ( idx : * const hts_idx_t , iter : * mut hts_itr_multi_t ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_regions ( idx : * const hts_idx_t , reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int , getid : hts_name2id_f , hdr : * mut :: std :: os :: raw :: c_void , itr_specific : hts_itr_multi_query_func , readrec : hts_readrec_func , seek : hts_seek_func , tell : hts_tell_func ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn hts_itr_multi_next ( fd : * mut htsFile , iter : * mut hts_itr_multi_t , r : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hts_reglist_free ( reglist : * mut hts_reglist_t , count : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn hts_itr_multi_destroy ( iter : * mut hts_itr_multi_t ) ; } extern "C" { pub fn hts_file_type ( fname : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct errmod_t { _unused : [ u8 ; 0 ] , } extern "C" { pub fn errmod_init ( depcorr : f64 ) -> * mut errmod_t ; } extern "C" { pub fn errmod_destroy ( em : * mut errmod_t ) ; } extern "C" { pub fn errmod_cal ( em : * const errmod_t , n : :: std :: os :: raw :: c_int , m : :: std :: os :: raw :: c_int , bases : * mut u16 , q : * mut f32 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct probaln_par_t { pub d : f32 , pub e : f32 , pub bw : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_probaln_par_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < probaln_par_t > ( ) , 12usize , concat ! ( "Size of: " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < probaln_par_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( probaln_par_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . d as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( d ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . e as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( e ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < probaln_par_t > ( ) ) ) . bw as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( probaln_par_t ) , "::" , stringify ! ( bw ) ) ) ; } extern "C" { pub fn probaln_glocal ( ref_ : * const u8 , l_ref : :: std :: os :: raw :: c_int , query : * const u8 , l_query : :: std :: os :: raw :: c_int , iqual : * const u8 , c : * const probaln_par_t , state : * mut :: std :: os :: raw :: c_int , q : * mut u8 ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct hts_md5_context { _unused : [ u8 ; 0 ] , } extern "C" { pub fn hts_md5_init ( ) -> * mut hts_md5_context ; } extern "C" { pub fn hts_md5_update ( ctx : * mut hts_md5_context , data : * const :: std :: os :: raw :: c_void , size : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn hts_md5_final ( digest : * mut :: std :: os :: raw :: c_uchar , ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_reset ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn hts_md5_hex ( hex : * mut :: std :: os :: raw :: c_char , digest : * const :: std :: os :: raw :: c_uchar ) ; } extern "C" { pub fn hts_md5_destroy ( ctx : * mut hts_md5_context ) ; } extern "C" { pub fn __assert_fail ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert_perror_fail ( __errnum : :: std :: os :: raw :: c_int , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_uint , __function : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn __assert ( __assertion : * const :: std :: os :: raw :: c_char , __file : * const :: std :: os :: raw :: c_char , __line : :: std :: os :: raw :: c_int ) ; } pub type _Float32 = f32 ; pub type _Float64 = f64 ; pub type _Float32x = f64 ; pub type _Float64x = u128 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct div_t { pub quot : :: std :: os :: raw :: c_int , pub rem : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_div_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < div_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( div_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < div_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( div_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < div_t > ( ) ) ) . rem as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( div_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ldiv_t { pub quot : :: std :: os :: raw :: c_long , pub rem : :: std :: os :: raw :: c_long , } # [ test ] fn bindgen_test_layout_ldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( ldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct lldiv_t { pub quot : :: std :: os :: raw :: c_longlong , pub rem : :: std :: os :: raw :: c_longlong , } # [ test ] fn bindgen_test_layout_lldiv_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < lldiv_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < lldiv_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( lldiv_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . quot as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( quot ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < lldiv_t > ( ) ) ) . rem as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( lldiv_t ) , "::" , stringify ! ( rem ) ) ) ; } extern "C" { pub fn __ctype_get_mb_cur_max ( ) -> usize ; } extern "C" { pub fn atof ( __nptr : * const :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn atoi ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn atol ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn atoll ( __nptr : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtod ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f64 ; } extern "C" { pub fn strtof ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> f32 ; } extern "C" { pub fn strtold ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char ) -> u128 ; } extern "C" { pub fn strtol ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn strtoul ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strtoq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtouq ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn strtoll ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn strtoull ( __nptr : * const :: std :: os :: raw :: c_char , __endptr : * mut * mut :: std :: os :: raw :: c_char , __base : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_ulonglong ; } extern "C" { pub fn l64a ( __n : :: std :: os :: raw :: c_long ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn a64l ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_long ; } pub type u_char = __u_char ; pub type u_short = __u_short ; pub type u_int = __u_int ; pub type u_long = __u_long ; pub type quad_t = __quad_t ; pub type u_quad_t = __u_quad_t ; pub type fsid_t = __fsid_t ; pub type loff_t = __loff_t ; pub type ino_t = __ino_t ; pub type dev_t = __dev_t ; pub type gid_t = __gid_t ; pub type mode_t = __mode_t ; pub type nlink_t = __nlink_t ; pub type uid_t = __uid_t ; pub type off_t = __off_t ; pub type pid_t = __pid_t ; pub type id_t = __id_t ; pub type daddr_t = __daddr_t ; pub type caddr_t = __caddr_t ; pub type key_t = __key_t ; pub type clock_t = __clock_t ; pub type clockid_t = __clockid_t ; pub type time_t = __time_t ; pub type timer_t = __timer_t ; pub type ulong = :: std :: os :: raw :: c_ulong ; pub type ushort = :: std :: os :: raw :: c_ushort ; pub type uint = :: std :: os :: raw :: c_uint ; pub type u_int8_t = __uint8_t ; pub type u_int16_t = __uint16_t ; pub type u_int32_t = __uint32_t ; pub type u_int64_t = __uint64_t ; pub type register_t = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __sigset_t { pub __val : [ :: std :: os :: raw :: c_ulong ; 16usize ] , } # [ test ] fn bindgen_test_layout___sigset_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __sigset_t > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __sigset_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __sigset_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __sigset_t > ( ) ) ) . __val as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __sigset_t ) , "::" , stringify ! ( __val ) ) ) ; } pub type sigset_t = __sigset_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timeval { pub tv_sec : __time_t , pub tv_usec : __suseconds_t , } # [ test ] fn bindgen_test_layout_timeval ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timeval > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timeval ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timeval > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timeval ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timeval > ( ) ) ) . tv_usec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timeval ) , "::" , stringify ! ( tv_usec ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct timespec { pub tv_sec : __time_t , pub tv_nsec : __syscall_slong_t , } # [ test ] fn bindgen_test_layout_timespec ( ) { assert_eq ! ( :: std :: mem :: size_of :: < timespec > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( timespec ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < timespec > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( timespec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_sec as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_sec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < timespec > ( ) ) ) . tv_nsec as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( timespec ) , "::" , stringify ! ( tv_nsec ) ) ) ; } pub type suseconds_t = __suseconds_t ; pub type __fd_mask = :: std :: os :: raw :: c_long ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct fd_set { pub __fds_bits : [ __fd_mask ; 16usize ] , } # [ test ] fn bindgen_test_layout_fd_set ( ) { assert_eq ! ( :: std :: mem :: size_of :: < fd_set > ( ) , 128usize , concat ! ( "Size of: " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < fd_set > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( fd_set ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < fd_set > ( ) ) ) . __fds_bits as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( fd_set ) , "::" , stringify ! ( __fds_bits ) ) ) ; } pub type fd_mask = __fd_mask ; extern "C" { pub fn select ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * mut timeval ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pselect ( __nfds : :: std :: os :: raw :: c_int , __readfds : * mut fd_set , __writefds : * mut fd_set , __exceptfds : * mut fd_set , __timeout : * const timespec , __sigmask : * const __sigset_t ) -> :: std :: os :: raw :: c_int ; } pub type blksize_t = __blksize_t ; pub type blkcnt_t = __blkcnt_t ; pub type fsblkcnt_t = __fsblkcnt_t ; pub type fsfilcnt_t = __fsfilcnt_t ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __atomic_wide_counter { pub __value64 : :: std :: os :: raw :: c_ulonglong , pub __value32 : __atomic_wide_counter__bindgen_ty_1 , _bindgen_union_align : u64 , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __atomic_wide_counter__bindgen_ty_1 { pub __low : :: std :: os :: raw :: c_uint , pub __high : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___atomic_wide_counter__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __low as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __low ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter__bindgen_ty_1 > ( ) ) ) . __high as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter__bindgen_ty_1 ) , "::" , stringify ! ( __high ) ) ) ; } # [ test ] fn bindgen_test_layout___atomic_wide_counter ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __atomic_wide_counter > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __atomic_wide_counter ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value64 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value64 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __atomic_wide_counter > ( ) ) ) . __value32 as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __atomic_wide_counter ) , "::" , stringify ! ( __value32 ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_list { pub __prev : * mut __pthread_internal_list , pub __next : * mut __pthread_internal_list , } # [ test ] fn bindgen_test_layout___pthread_internal_list ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_list > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_list > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __prev as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __prev ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_list > ( ) ) ) . __next as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_list ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_list_t = __pthread_internal_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_internal_slist { pub __next : * mut __pthread_internal_slist , } # [ test ] fn bindgen_test_layout___pthread_internal_slist ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_internal_slist > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_internal_slist ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_internal_slist > ( ) ) ) . __next as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_internal_slist ) , "::" , stringify ! ( __next ) ) ) ; } pub type __pthread_slist_t = __pthread_internal_slist ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_mutex_s { pub __lock : :: std :: os :: raw :: c_int , pub __count : :: std :: os :: raw :: c_uint , pub __owner : :: std :: os :: raw :: c_int , pub __nusers : :: std :: os :: raw :: c_uint , pub __kind : :: std :: os :: raw :: c_int , pub __spins : :: std :: os :: raw :: c_short , pub __elision : :: std :: os :: raw :: c_short , pub __list : __pthread_list_t , } # [ test ] fn bindgen_test_layout___pthread_mutex_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_mutex_s > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_mutex_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_mutex_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __lock as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __lock ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __count as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __owner as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __owner ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __nusers as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __nusers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __kind as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __kind ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __spins as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __spins ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __elision as * const _ as usize } , 22usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __elision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_mutex_s > ( ) ) ) . __list as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_mutex_s ) , "::" , stringify ! ( __list ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_rwlock_arch_t { pub __readers : :: std :: os :: raw :: c_uint , pub __writers : :: std :: os :: raw :: c_uint , pub __wrphase_futex : :: std :: os :: raw :: c_uint , pub __writers_futex : :: std :: os :: raw :: c_uint , pub __pad3 : :: std :: os :: raw :: c_uint , pub __pad4 : :: std :: os :: raw :: c_uint , pub __cur_writer : :: std :: os :: raw :: c_int , pub __shared : :: std :: os :: raw :: c_int , pub __rwelision : :: std :: os :: raw :: c_schar , pub __pad1 : [ :: std :: os :: raw :: c_uchar ; 7usize ] , pub __pad2 : :: std :: os :: raw :: c_ulong , pub __flags : :: std :: os :: raw :: c_uint , } # [ test ] fn bindgen_test_layout___pthread_rwlock_arch_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_rwlock_arch_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_rwlock_arch_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_rwlock_arch_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __readers as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __readers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __wrphase_futex as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __wrphase_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __writers_futex as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __writers_futex ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad3 as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad3 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad4 as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad4 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __cur_writer as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __cur_writer ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __shared as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __shared ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __rwelision as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __rwelision ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad1 as * const _ as usize } , 33usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __pad2 as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __pad2 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_rwlock_arch_t > ( ) ) ) . __flags as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_rwlock_arch_t ) , "::" , stringify ! ( __flags ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __pthread_cond_s { pub __wseq : __atomic_wide_counter , pub __g1_start : __atomic_wide_counter , pub __g_refs : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g_size : [ :: std :: os :: raw :: c_uint ; 2usize ] , pub __g1_orig_size : :: std :: os :: raw :: c_uint , pub __wrefs : :: std :: os :: raw :: c_uint , pub __g_signals : [ :: std :: os :: raw :: c_uint ; 2usize ] , } # [ test ] fn bindgen_test_layout___pthread_cond_s ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __pthread_cond_s > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __pthread_cond_s > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __pthread_cond_s ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wseq as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wseq ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_start as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_start ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_refs as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_refs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_size as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g1_orig_size as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g1_orig_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __wrefs as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __wrefs ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __pthread_cond_s > ( ) ) ) . __g_signals as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( __pthread_cond_s ) , "::" , stringify ! ( __g_signals ) ) ) ; } pub type __tss_t = :: std :: os :: raw :: c_uint ; pub type __thrd_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __once_flag { pub __data : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout___once_flag ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __once_flag > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __once_flag > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __once_flag ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __once_flag > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __once_flag ) , "::" , stringify ! ( __data ) ) ) ; } pub type pthread_t = :: std :: os :: raw :: c_ulong ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutexattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_mutexattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutexattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutexattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutexattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutexattr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_condattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_condattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_condattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_condattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_condattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_condattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_key_t = :: std :: os :: raw :: c_uint ; pub type pthread_once_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_attr_t { pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_attr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_attr_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_attr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_attr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_attr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_attr_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_mutex_t { pub __data : __pthread_mutex_s , pub __size : [ :: std :: os :: raw :: c_char ; 40usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 5usize ] , } # [ test ] fn bindgen_test_layout_pthread_mutex_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_mutex_t > ( ) , 40usize , concat ! ( "Size of: " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_mutex_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_mutex_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_mutex_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_mutex_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_cond_t { pub __data : __pthread_cond_s , pub __size : [ :: std :: os :: raw :: c_char ; 48usize ] , pub __align : :: std :: os :: raw :: c_longlong , _bindgen_union_align : [ u64 ; 6usize ] , } # [ test ] fn bindgen_test_layout_pthread_cond_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_cond_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_cond_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_cond_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_cond_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_cond_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlock_t { pub __data : __pthread_rwlock_arch_t , pub __size : [ :: std :: os :: raw :: c_char ; 56usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 7usize ] , } # [ test ] fn bindgen_test_layout_pthread_rwlock_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlock_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlock_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlock_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __data as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlock_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlock_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_rwlockattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 8usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : u64 , } # [ test ] fn bindgen_test_layout_pthread_rwlockattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_rwlockattr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_rwlockattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_rwlockattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_rwlockattr_t ) , "::" , stringify ! ( __align ) ) ) ; } pub type pthread_spinlock_t = :: std :: os :: raw :: c_int ; # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrier_t { pub __size : [ :: std :: os :: raw :: c_char ; 32usize ] , pub __align : :: std :: os :: raw :: c_long , _bindgen_union_align : [ u64 ; 4usize ] , } # [ test ] fn bindgen_test_layout_pthread_barrier_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrier_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrier_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrier_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrier_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrier_t ) , "::" , stringify ! ( __align ) ) ) ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union pthread_barrierattr_t { pub __size : [ :: std :: os :: raw :: c_char ; 4usize ] , pub __align : :: std :: os :: raw :: c_int , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_pthread_barrierattr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < pthread_barrierattr_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( pthread_barrierattr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __size as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < pthread_barrierattr_t > ( ) ) ) . __align as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( pthread_barrierattr_t ) , "::" , stringify ! ( __align ) ) ) ; } extern "C" { pub fn random ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srandom ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn initstate ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn setstate ( __statebuf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct random_data { pub fptr : * mut i32 , pub rptr : * mut i32 , pub state : * mut i32 , pub rand_type : :: std :: os :: raw :: c_int , pub rand_deg : :: std :: os :: raw :: c_int , pub rand_sep : :: std :: os :: raw :: c_int , pub end_ptr : * mut i32 , } # [ test ] fn bindgen_test_layout_random_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < random_data > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( random_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < random_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( random_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . fptr as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( fptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rptr as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . state as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( state ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_type as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_type ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_deg as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_deg ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . rand_sep as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( rand_sep ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < random_data > ( ) ) ) . end_ptr as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( random_data ) , "::" , stringify ! ( end_ptr ) ) ) ; } extern "C" { pub fn random_r ( __buf : * mut random_data , __result : * mut i32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srandom_r ( __seed : :: std :: os :: raw :: c_uint , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn initstate_r ( __seed : :: std :: os :: raw :: c_uint , __statebuf : * mut :: std :: os :: raw :: c_char , __statelen : usize , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setstate_r ( __statebuf : * mut :: std :: os :: raw :: c_char , __buf : * mut random_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn rand ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand ( __seed : :: std :: os :: raw :: c_uint ) ; } extern "C" { pub fn rand_r ( __seed : * mut :: std :: os :: raw :: c_uint ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn drand48 ( ) -> f64 ; } extern "C" { pub fn erand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> f64 ; } extern "C" { pub fn lrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn nrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn mrand48 ( ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn jrand48 ( __xsubi : * mut :: std :: os :: raw :: c_ushort ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn srand48 ( __seedval : :: std :: os :: raw :: c_long ) ; } extern "C" { pub fn seed48 ( __seed16v : * mut :: std :: os :: raw :: c_ushort ) -> * mut :: std :: os :: raw :: c_ushort ; } extern "C" { pub fn lcong48 ( __param : * mut :: std :: os :: raw :: c_ushort ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct drand48_data { pub __x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __old_x : [ :: std :: os :: raw :: c_ushort ; 3usize ] , pub __c : :: std :: os :: raw :: c_ushort , pub __init : :: std :: os :: raw :: c_ushort , pub __a : :: std :: os :: raw :: c_ulonglong , } # [ test ] fn bindgen_test_layout_drand48_data ( ) { assert_eq ! ( :: std :: mem :: size_of :: < drand48_data > ( ) , 24usize , concat ! ( "Size of: " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < drand48_data > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( drand48_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __x as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __old_x as * const _ as usize } , 6usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __old_x ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __c as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __c ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __init as * const _ as usize } , 14usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __init ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < drand48_data > ( ) ) ) . __a as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( drand48_data ) , "::" , stringify ! ( __a ) ) ) ; } extern "C" { pub fn drand48_r ( __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn erand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut f64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn nrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mrand48_r ( __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn jrand48_r ( __xsubi : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data , __result : * mut :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn srand48_r ( __seedval : :: std :: os :: raw :: c_long , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn seed48_r ( __seed16v : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn lcong48_r ( __param : * mut :: std :: os :: raw :: c_ushort , __buffer : * mut drand48_data ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn malloc ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn calloc ( __nmemb : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn realloc ( __ptr : * mut :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn free ( __ptr : * mut :: std :: os :: raw :: c_void ) ; } extern "C" { pub fn reallocarray ( __ptr : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn alloca ( __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn valloc ( __size : usize ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn posix_memalign ( __memptr : * mut * mut :: std :: os :: raw :: c_void , __alignment : usize , __size : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn aligned_alloc ( __alignment : :: std :: os :: raw :: c_ulong , __size : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn abort ( ) ; } extern "C" { pub fn atexit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn at_quick_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( ) > ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn on_exit ( __func : :: std :: option :: Option < unsafe extern "C" fn ( __status : :: std :: os :: raw :: c_int , __arg : * mut :: std :: os :: raw :: c_void ) > , __arg : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn quick_exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn _Exit ( __status : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn getenv ( __name : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn putenv ( __string : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setenv ( __name : * const :: std :: os :: raw :: c_char , __value : * const :: std :: os :: raw :: c_char , __replace : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn unsetenv ( __name : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearenv ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mktemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn mkstemp ( __template : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkstemps ( __template : * mut :: std :: os :: raw :: c_char , __suffixlen : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mkdtemp ( __template : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn system ( __command : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn realpath ( __name : * const :: std :: os :: raw :: c_char , __resolved : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } pub type __compar_fn_t = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * const :: std :: os :: raw :: c_void , arg2 : * const :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int > ; extern "C" { pub fn bsearch ( __key : * const :: std :: os :: raw :: c_void , __base : * const :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn qsort ( __base : * mut :: std :: os :: raw :: c_void , __nmemb : usize , __size : usize , __compar : __compar_fn_t ) ; } extern "C" { pub fn abs ( __x : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn labs ( __x : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn llabs ( __x : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_longlong ; } extern "C" { pub fn div ( __numer : :: std :: os :: raw :: c_int , __denom : :: std :: os :: raw :: c_int ) -> div_t ; } extern "C" { pub fn ldiv ( __numer : :: std :: os :: raw :: c_long , __denom : :: std :: os :: raw :: c_long ) -> ldiv_t ; } extern "C" { pub fn lldiv ( __numer : :: std :: os :: raw :: c_longlong , __denom : :: std :: os :: raw :: c_longlong ) -> lldiv_t ; } extern "C" { pub fn ecvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn fcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn gcvt ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qecvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qfcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn qgcvt ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ecvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fcvt_r ( __value : f64 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qecvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn qfcvt_r ( __value : u128 , __ndigit : :: std :: os :: raw :: c_int , __decpt : * mut :: std :: os :: raw :: c_int , __sign : * mut :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __len : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mblen ( __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbtowc ( __pwc : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn wctomb ( __s : * mut :: std :: os :: raw :: c_char , __wchar : wchar_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn mbstowcs ( __pwcs : * mut wchar_t , __s : * const :: std :: os :: raw :: c_char , __n : usize ) -> usize ; } extern "C" { pub fn wcstombs ( __s : * mut :: std :: os :: raw :: c_char , __pwcs : * const wchar_t , __n : usize ) -> usize ; } extern "C" { pub fn rpmatch ( __response : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getsubopt ( __optionp : * mut * mut :: std :: os :: raw :: c_char , __tokens : * const * mut :: std :: os :: raw :: c_char , __valuep : * mut * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getloadavg ( __loadavg : * mut f64 , __nelem : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memcpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memmove ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memccpy ( __dest : * mut :: std :: os :: raw :: c_void , __src : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memset ( __s : * mut :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn memcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn __memcmpeq ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn memchr ( __s : * const :: std :: os :: raw :: c_void , __c : :: std :: os :: raw :: c_int , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn strcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strncat ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcoll ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_ulong ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __locale_struct { pub __locales : [ * mut __locale_data ; 13usize ] , pub __ctype_b : * const :: std :: os :: raw :: c_ushort , pub __ctype_tolower : * const :: std :: os :: raw :: c_int , pub __ctype_toupper : * const :: std :: os :: raw :: c_int , pub __names : [ * const :: std :: os :: raw :: c_char ; 13usize ] , } # [ test ] fn bindgen_test_layout___locale_struct ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __locale_struct > ( ) , 232usize , concat ! ( "Size of: " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __locale_struct > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( __locale_struct ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __locales as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __locales ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_b as * const _ as usize } , 104usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_b ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_tolower as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_tolower ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __ctype_toupper as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __ctype_toupper ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __locale_struct > ( ) ) ) . __names as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( __locale_struct ) , "::" , stringify ! ( __names ) ) ) ; } pub type __locale_t = * mut __locale_struct ; pub type locale_t = __locale_t ; extern "C" { pub fn strcoll_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __l : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strxfrm_l ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize , __l : locale_t ) -> usize ; } extern "C" { pub fn strdup ( __s : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strndup ( __string : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strrchr ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strcspn ( __s : * const :: std :: os :: raw :: c_char , __reject : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strspn ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strpbrk ( __s : * const :: std :: os :: raw :: c_char , __accept : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strstr ( __haystack : * const :: std :: os :: raw :: c_char , __needle : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strtok_r ( __s : * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char , __save_ptr : * mut * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strlen ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn strnlen ( __string : * const :: std :: os :: raw :: c_char , __maxlen : usize ) -> usize ; } extern "C" { pub fn strerror ( __errnum : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { # [ link_name = "\u{1}__xpg_strerror_r" ] pub fn strerror_r ( __errnum : :: std :: os :: raw :: c_int , __buf : * mut :: std :: os :: raw :: c_char , __buflen : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strerror_l ( __errnum : :: std :: os :: raw :: c_int , __l : locale_t ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcmp ( __s1 : * const :: std :: os :: raw :: c_void , __s2 : * const :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcopy ( __src : * const :: std :: os :: raw :: c_void , __dest : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : :: std :: os :: raw :: c_ulong ) ; } extern "C" { pub fn index ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn rindex ( __s : * const :: std :: os :: raw :: c_char , __c : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn ffs ( __i : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsl ( __l : :: std :: os :: raw :: c_long ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ffsll ( __ll : :: std :: os :: raw :: c_longlong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strcasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn strncasecmp_l ( __s1 : * const :: std :: os :: raw :: c_char , __s2 : * const :: std :: os :: raw :: c_char , __n : usize , __loc : locale_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn explicit_bzero ( __s : * mut :: std :: os :: raw :: c_void , __n : usize ) ; } extern "C" { pub fn strsep ( __stringp : * mut * mut :: std :: os :: raw :: c_char , __delim : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn strsignal ( __sig : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpcpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : usize ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn stpncpy ( __dest : * mut :: std :: os :: raw :: c_char , __src : * const :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_ulong ) -> * mut :: std :: os :: raw :: c_char ; } pub type va_list = __builtin_va_list ; pub type __gnuc_va_list = __builtin_va_list ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct __mbstate_t { pub __count : :: std :: os :: raw :: c_int , pub __value : __mbstate_t__bindgen_ty_1 , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union __mbstate_t__bindgen_ty_1 { pub __wch : :: std :: os :: raw :: c_uint , pub __wchb : [ :: std :: os :: raw :: c_char ; 4usize ] , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout___mbstate_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __mbstate_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __mbstate_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __mbstate_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t__bindgen_ty_1 > ( ) ) ) . __wch as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) , "::" , stringify ! ( __wch ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t__bindgen_ty_1 > ( ) ) ) . __wchb as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t__bindgen_ty_1 ) , "::" , stringify ! ( __wchb ) ) ) ; } # [ test ] fn bindgen_test_layout___mbstate_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < __mbstate_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( __mbstate_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < __mbstate_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( __mbstate_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t > ( ) ) ) . __count as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t ) , "::" , stringify ! ( __count ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < __mbstate_t > ( ) ) ) . __value as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( __mbstate_t ) , "::" , stringify ! ( __value ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _G_fpos_t { pub __pos : __off_t , pub __state : __mbstate_t , } # [ test ] fn bindgen_test_layout__G_fpos_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _G_fpos_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( _G_fpos_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _G_fpos_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _G_fpos_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos_t > ( ) ) ) . __pos as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos_t ) , "::" , stringify ! ( __pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos_t > ( ) ) ) . __state as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos_t ) , "::" , stringify ! ( __state ) ) ) ; } pub type __fpos_t = _G_fpos_t ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _G_fpos64_t { pub __pos : __off64_t , pub __state : __mbstate_t , } # [ test ] fn bindgen_test_layout__G_fpos64_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _G_fpos64_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( _G_fpos64_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _G_fpos64_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _G_fpos64_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos64_t > ( ) ) ) . __pos as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos64_t ) , "::" , stringify ! ( __pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _G_fpos64_t > ( ) ) ) . __state as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _G_fpos64_t ) , "::" , stringify ! ( __state ) ) ) ; } pub type __fpos64_t = _G_fpos64_t ; pub type __FILE = _IO_FILE ; pub type FILE = _IO_FILE ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_marker { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_codecvt { _unused : [ u8 ; 0 ] , } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_wide_data { _unused : [ u8 ; 0 ] , } pub type _IO_lock_t = :: std :: os :: raw :: c_void ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct _IO_FILE { pub _flags : :: std :: os :: raw :: c_int , pub _IO_read_ptr : * mut :: std :: os :: raw :: c_char , pub _IO_read_end : * mut :: std :: os :: raw :: c_char , pub _IO_read_base : * mut :: std :: os :: raw :: c_char , pub _IO_write_base : * mut :: std :: os :: raw :: c_char , pub _IO_write_ptr : * mut :: std :: os :: raw :: c_char , pub _IO_write_end : * mut :: std :: os :: raw :: c_char , pub _IO_buf_base : * mut :: std :: os :: raw :: c_char , pub _IO_buf_end : * mut :: std :: os :: raw :: c_char , pub _IO_save_base : * mut :: std :: os :: raw :: c_char , pub _IO_backup_base : * mut :: std :: os :: raw :: c_char , pub _IO_save_end : * mut :: std :: os :: raw :: c_char , pub _markers : * mut _IO_marker , pub _chain : * mut _IO_FILE , pub _fileno : :: std :: os :: raw :: c_int , pub _flags2 : :: std :: os :: raw :: c_int , pub _old_offset : __off_t , pub _cur_column : :: std :: os :: raw :: c_ushort , pub _vtable_offset : :: std :: os :: raw :: c_schar , pub _shortbuf : [ :: std :: os :: raw :: c_char ; 1usize ] , pub _lock : * mut _IO_lock_t , pub _offset : __off64_t , pub _codecvt : * mut _IO_codecvt , pub _wide_data : * mut _IO_wide_data , pub _freeres_list : * mut _IO_FILE , pub _freeres_buf : * mut :: std :: os :: raw :: c_void , pub __pad5 : usize , pub _mode : :: std :: os :: raw :: c_int , pub _unused2 : [ :: std :: os :: raw :: c_char ; 20usize ] , } # [ test ] fn bindgen_test_layout__IO_FILE ( ) { assert_eq ! ( :: std :: mem :: size_of :: < _IO_FILE > ( ) , 216usize , concat ! ( "Size of: " , stringify ! ( _IO_FILE ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < _IO_FILE > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( _IO_FILE ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _flags as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _flags ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_ptr as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_ptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_end as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_read_base as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_read_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_base as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_ptr as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_ptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_write_end as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_write_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_buf_base as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_buf_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_buf_end as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_buf_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_save_base as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_save_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_backup_base as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_backup_base ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _IO_save_end as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _IO_save_end ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _markers as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _markers ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _chain as * const _ as usize } , 104usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _chain ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _fileno as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _fileno ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _flags2 as * const _ as usize } , 116usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _flags2 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _old_offset as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _old_offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _cur_column as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _cur_column ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _vtable_offset as * const _ as usize } , 130usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _vtable_offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _shortbuf as * const _ as usize } , 131usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _shortbuf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _lock as * const _ as usize } , 136usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _lock ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _offset as * const _ as usize } , 144usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _offset ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _codecvt as * const _ as usize } , 152usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _codecvt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _wide_data as * const _ as usize } , 160usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _wide_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _freeres_list as * const _ as usize } , 168usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _freeres_list ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _freeres_buf as * const _ as usize } , 176usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _freeres_buf ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . __pad5 as * const _ as usize } , 184usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( __pad5 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _mode as * const _ as usize } , 192usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _mode ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < _IO_FILE > ( ) ) ) . _unused2 as * const _ as usize } , 196usize , concat ! ( "Offset of field: " , stringify ! ( _IO_FILE ) , "::" , stringify ! ( _unused2 ) ) ) ; } pub type fpos_t = __fpos_t ; extern "C" { # [ link_name = "\u{1}stdin" ] pub static mut stdin : * mut FILE ; } extern "C" { # [ link_name = "\u{1}stdout" ] pub static mut stdout : * mut FILE ; } extern "C" { # [ link_name = "\u{1}stderr" ] pub static mut stderr : * mut FILE ; } extern "C" { pub fn remove ( __filename : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn rename ( __old : * const :: std :: os :: raw :: c_char , __new : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn renameat ( __oldfd : :: std :: os :: raw :: c_int , __old : * const :: std :: os :: raw :: c_char , __newfd : :: std :: os :: raw :: c_int , __new : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fclose ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn tmpfile ( ) -> * mut FILE ; } extern "C" { pub fn tmpnam ( arg1 : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn tmpnam_r ( __s : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn tempnam ( __dir : * const :: std :: os :: raw :: c_char , __pfx : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn fflush ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fflush_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fopen ( __filename : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn freopen ( __filename : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char , __stream : * mut FILE ) -> * mut FILE ; } extern "C" { pub fn fdopen ( __fd : :: std :: os :: raw :: c_int , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn fmemopen ( __s : * mut :: std :: os :: raw :: c_void , __len : usize , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn open_memstream ( __bufloc : * mut * mut :: std :: os :: raw :: c_char , __sizeloc : * mut usize ) -> * mut FILE ; } extern "C" { pub fn setbuf ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn setvbuf ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char , __modes : :: std :: os :: raw :: c_int , __n : usize ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn setbuffer ( __stream : * mut FILE , __buf : * mut :: std :: os :: raw :: c_char , __size : usize ) ; } extern "C" { pub fn setlinebuf ( __stream : * mut FILE ) ; } extern "C" { pub fn fprintf ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn printf ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sprintf ( __s : * mut :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vfprintf ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vprintf ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsprintf ( __s : * mut :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn snprintf ( __s : * mut :: std :: os :: raw :: c_char , __maxlen : :: std :: os :: raw :: c_ulong , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsnprintf ( __s : * mut :: std :: os :: raw :: c_char , __maxlen : :: std :: os :: raw :: c_ulong , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vdprintf ( __fd : :: std :: os :: raw :: c_int , __fmt : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn dprintf ( __fd : :: std :: os :: raw :: c_int , __fmt : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fscanf ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn scanf ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sscanf ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_fscanf" ] pub fn fscanf1 ( __stream : * mut FILE , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_scanf" ] pub fn scanf1 ( __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_sscanf" ] pub fn sscanf1 ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vfscanf ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vscanf ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vsscanf ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vfscanf" ] pub fn vfscanf1 ( __s : * mut FILE , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vscanf" ] pub fn vscanf1 ( __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}__isoc99_vsscanf" ] pub fn vsscanf1 ( __s : * const :: std :: os :: raw :: c_char , __format : * const :: std :: os :: raw :: c_char , __arg : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgetc ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getc ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getchar ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getc_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getchar_unlocked ( ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgetc_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fputc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putchar ( __c : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fputc_unlocked ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putc_unlocked ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putchar_unlocked ( __c : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn getw ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn putw ( __w : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fgets ( __s : * mut :: std :: os :: raw :: c_char , __n : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn __getdelim ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __delimiter : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn getdelim ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __delimiter : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn getline ( __lineptr : * mut * mut :: std :: os :: raw :: c_char , __n : * mut usize , __stream : * mut FILE ) -> __ssize_t ; } extern "C" { pub fn fputs ( __s : * const :: std :: os :: raw :: c_char , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn puts ( __s : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ungetc ( __c : :: std :: os :: raw :: c_int , __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fread ( __ptr : * mut :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong , __n : :: std :: os :: raw :: c_ulong , __stream : * mut FILE ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn fwrite ( __ptr : * const :: std :: os :: raw :: c_void , __size : :: std :: os :: raw :: c_ulong , __n : :: std :: os :: raw :: c_ulong , __s : * mut FILE ) -> :: std :: os :: raw :: c_ulong ; } extern "C" { pub fn fread_unlocked ( __ptr : * mut :: std :: os :: raw :: c_void , __size : usize , __n : usize , __stream : * mut FILE ) -> usize ; } extern "C" { pub fn fwrite_unlocked ( __ptr : * const :: std :: os :: raw :: c_void , __size : usize , __n : usize , __stream : * mut FILE ) -> usize ; } extern "C" { pub fn fseek ( __stream : * mut FILE , __off : :: std :: os :: raw :: c_long , __whence : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ftell ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_long ; } extern "C" { pub fn rewind ( __stream : * mut FILE ) ; } extern "C" { pub fn fseeko ( __stream : * mut FILE , __off : __off_t , __whence : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ftello ( __stream : * mut FILE ) -> __off_t ; } extern "C" { pub fn fgetpos ( __stream : * mut FILE , __pos : * mut fpos_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fsetpos ( __stream : * mut FILE , __pos : * const fpos_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearerr ( __stream : * mut FILE ) ; } extern "C" { pub fn feof ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ferror ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn clearerr_unlocked ( __stream : * mut FILE ) ; } extern "C" { pub fn feof_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ferror_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn perror ( __s : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn fileno ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn fileno_unlocked ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn pclose ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn popen ( __command : * const :: std :: os :: raw :: c_char , __modes : * const :: std :: os :: raw :: c_char ) -> * mut FILE ; } extern "C" { pub fn ctermid ( __s : * mut :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn flockfile ( __stream : * mut FILE ) ; } extern "C" { pub fn ftrylockfile ( __stream : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn funlockfile ( __stream : * mut FILE ) ; } extern "C" { pub fn __uflow ( arg1 : * mut FILE ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn __overflow ( arg1 : * mut FILE , arg2 : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct ks_tokaux_t { pub tab : [ u64 ; 4usize ] , pub sep : :: std :: os :: raw :: c_int , pub finished : :: std :: os :: raw :: c_int , pub p : * const :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout_ks_tokaux_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < ks_tokaux_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( ks_tokaux_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < ks_tokaux_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( ks_tokaux_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . tab as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( tab ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . sep as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( sep ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . finished as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( finished ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < ks_tokaux_t > ( ) ) ) . p as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( ks_tokaux_t ) , "::" , stringify ! ( p ) ) ) ; } extern "C" { pub fn kvsprintf ( s : * mut kstring_t , fmt : * const :: std :: os :: raw :: c_char , ap : * mut __va_list_tag ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ksprintf ( s : * mut kstring_t , fmt : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn kputd ( d : f64 , s : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn ksplit_core ( s : * mut :: std :: os :: raw :: c_char , delimiter : :: std :: os :: raw :: c_int , _max : * mut :: std :: os :: raw :: c_int , _offsets : * mut * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn kstrstr ( str : * const :: std :: os :: raw :: c_char , pat : * const :: std :: os :: raw :: c_char , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn kstrnstr ( str : * const :: std :: os :: raw :: c_char , pat : * const :: std :: os :: raw :: c_char , n : :: std :: os :: raw :: c_int , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn kmemmem ( _str : * const :: std :: os :: raw :: c_void , n : :: std :: os :: raw :: c_int , _pat : * const :: std :: os :: raw :: c_void , m : :: std :: os :: raw :: c_int , _prep : * mut * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_void ; } extern "C" { pub fn kstrtok ( str : * const :: std :: os :: raw :: c_char , sep : * const :: std :: os :: raw :: c_char , aux : * mut ks_tokaux_t ) -> * mut :: std :: os :: raw :: c_char ; } pub type kgets_func = :: std :: option :: Option < unsafe extern "C" fn ( arg1 : * mut :: std :: os :: raw :: c_char , arg2 : :: std :: os :: raw :: c_int , arg3 : * mut :: std :: os :: raw :: c_void ) -> * mut :: std :: os :: raw :: c_char > ; extern "C" { pub fn kgetline ( s : * mut kstring_t , fgets : kgets_func , fp : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } pub type uint16_u = u16 ; pub type uint32_u = u32 ; pub type uint64_u = u64 ; # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_hrec_t { pub type_ : :: std :: os :: raw :: c_int , pub key : * mut :: std :: os :: raw :: c_char , pub value : * mut :: std :: os :: raw :: c_char , pub nkeys : :: std :: os :: raw :: c_int , pub keys : * mut * mut :: std :: os :: raw :: c_char , pub vals : * mut * mut :: std :: os :: raw :: c_char , } # [ test ] fn bindgen_test_layout_bcf_hrec_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_hrec_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( bcf_hrec_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_hrec_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_hrec_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . type_ as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . key as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . value as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( value ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . nkeys as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( nkeys ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . keys as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( keys ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hrec_t > ( ) ) ) . vals as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hrec_t ) , "::" , stringify ! ( vals ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_idinfo_t { pub info : [ u32 ; 3usize ] , pub hrec : [ * mut bcf_hrec_t ; 3usize ] , pub id : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_bcf_idinfo_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_idinfo_t > ( ) , 48usize , concat ! ( "Size of: " , stringify ! ( bcf_idinfo_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_idinfo_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_idinfo_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . info as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( info ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . hrec as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( hrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idinfo_t > ( ) ) ) . id as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idinfo_t ) , "::" , stringify ! ( id ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_idpair_t { pub key : * const :: std :: os :: raw :: c_char , pub val : * const bcf_idinfo_t , } # [ test ] fn bindgen_test_layout_bcf_idpair_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_idpair_t > ( ) , 16usize , concat ! ( "Size of: " , stringify ! ( bcf_idpair_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_idpair_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_idpair_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idpair_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idpair_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_idpair_t > ( ) ) ) . val as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_idpair_t ) , "::" , stringify ! ( val ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_hdr_t { pub n : [ i32 ; 3usize ] , pub id : [ * mut bcf_idpair_t ; 3usize ] , pub dict : [ * mut :: std :: os :: raw :: c_void ; 3usize ] , pub samples : * mut * mut :: std :: os :: raw :: c_char , pub hrec : * mut * mut bcf_hrec_t , pub nhrec : :: std :: os :: raw :: c_int , pub dirty : :: std :: os :: raw :: c_int , pub ntransl : :: std :: os :: raw :: c_int , pub transl : [ * mut :: std :: os :: raw :: c_int ; 2usize ] , pub nsamples_ori : :: std :: os :: raw :: c_int , pub keep_samples : * mut u8 , pub mem : kstring_t , pub m : [ i32 ; 3usize ] , } # [ test ] fn bindgen_test_layout_bcf_hdr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_hdr_t > ( ) , 168usize , concat ! ( "Size of: " , stringify ! ( bcf_hdr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_hdr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_hdr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . n as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . id as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . dict as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( dict ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . samples as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( samples ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . hrec as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( hrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . nhrec as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( nhrec ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . dirty as * const _ as usize } , 84usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( dirty ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . ntransl as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( ntransl ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . transl as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( transl ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . nsamples_ori as * const _ as usize } , 112usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( nsamples_ori ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . keep_samples as * const _ as usize } , 120usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( keep_samples ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . mem as * const _ as usize } , 128usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( mem ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_hdr_t > ( ) ) ) . m as * const _ as usize } , 152usize , concat ! ( "Offset of field: " , stringify ! ( bcf_hdr_t ) , "::" , stringify ! ( m ) ) ) ; } extern "C" { # [ link_name = "\u{1}bcf_type_shift" ] pub static mut bcf_type_shift : [ u8 ; 0usize ] ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct variant_t { pub type_ : :: std :: os :: raw :: c_int , pub n : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_variant_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < variant_t > ( ) , 8usize , concat ! ( "Size of: " , stringify ! ( variant_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < variant_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( variant_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < variant_t > ( ) ) ) . type_ as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( variant_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < variant_t > ( ) ) ) . n as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( variant_t ) , "::" , stringify ! ( n ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_fmt_t { pub id : :: std :: os :: raw :: c_int , pub n : :: std :: os :: raw :: c_int , pub size : :: std :: os :: raw :: c_int , pub type_ : :: std :: os :: raw :: c_int , pub p : * mut u8 , pub p_len : u32 , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , } # [ test ] fn bindgen_test_layout_bcf_fmt_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_fmt_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( bcf_fmt_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_fmt_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_fmt_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . id as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . n as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( n ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . size as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . type_ as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . p as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( p ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_fmt_t > ( ) ) ) . p_len as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_fmt_t ) , "::" , stringify ! ( p_len ) ) ) ; } impl bcf_fmt_t { # [ inline ] pub fn p_off ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 31u8 ) as u32 ) } } # [ inline ] pub fn set_p_off ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 31u8 , val as u64 ) } } # [ inline ] pub fn p_free ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 31usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_p_free ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 31usize , 1u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( p_off : u32 , p_free : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 31u8 , { let p_off : u32 = unsafe { :: std :: mem :: transmute ( p_off ) } ; p_off as u64 } ) ; __bindgen_bitfield_unit . set ( 31usize , 1u8 , { let p_free : u32 = unsafe { :: std :: mem :: transmute ( p_free ) } ; p_free as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_info_t { pub key : :: std :: os :: raw :: c_int , pub type_ : :: std :: os :: raw :: c_int , pub len : :: std :: os :: raw :: c_int , pub v1 : bcf_info_t__bindgen_ty_1 , pub vptr : * mut u8 , pub vptr_len : u32 , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > , } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] pub union bcf_info_t__bindgen_ty_1 { pub i : i32 , pub f : f32 , _bindgen_union_align : u32 , } # [ test ] fn bindgen_test_layout_bcf_info_t__bindgen_ty_1 ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_info_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Size of: " , stringify ! ( bcf_info_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_info_t__bindgen_ty_1 > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( bcf_info_t__bindgen_ty_1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t__bindgen_ty_1 > ( ) ) ) . i as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t__bindgen_ty_1 ) , "::" , stringify ! ( i ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t__bindgen_ty_1 > ( ) ) ) . f as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t__bindgen_ty_1 ) , "::" , stringify ! ( f ) ) ) ; } # [ test ] fn bindgen_test_layout_bcf_info_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_info_t > ( ) , 32usize , concat ! ( "Size of: " , stringify ! ( bcf_info_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_info_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_info_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . key as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( key ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . type_ as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( type_ ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . len as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( len ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . v1 as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( v1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . vptr as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( vptr ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_info_t > ( ) ) ) . vptr_len as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_info_t ) , "::" , stringify ! ( vptr_len ) ) ) ; } impl bcf_info_t { # [ inline ] pub fn vptr_off ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 31u8 ) as u32 ) } } # [ inline ] pub fn set_vptr_off ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 31u8 , val as u64 ) } } # [ inline ] pub fn vptr_free ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 31usize , 1u8 ) as u32 ) } } # [ inline ] pub fn set_vptr_free ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 31usize , 1u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( vptr_off : u32 , vptr_free : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 4usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 31u8 , { let vptr_off : u32 = unsafe { :: std :: mem :: transmute ( vptr_off ) } ; vptr_off as u64 } ) ; __bindgen_bitfield_unit . set ( 31usize , 1u8 , { let vptr_free : u32 = unsafe { :: std :: mem :: transmute ( vptr_free ) } ; vptr_free as u64 } ) ; __bindgen_bitfield_unit } } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf_dec_t { pub m_fmt : :: std :: os :: raw :: c_int , pub m_info : :: std :: os :: raw :: c_int , pub m_id : :: std :: os :: raw :: c_int , pub m_als : :: std :: os :: raw :: c_int , pub m_allele : :: std :: os :: raw :: c_int , pub m_flt : :: std :: os :: raw :: c_int , pub n_flt : :: std :: os :: raw :: c_int , pub flt : * mut :: std :: os :: raw :: c_int , pub id : * mut :: std :: os :: raw :: c_char , pub als : * mut :: std :: os :: raw :: c_char , pub allele : * mut * mut :: std :: os :: raw :: c_char , pub info : * mut bcf_info_t , pub fmt : * mut bcf_fmt_t , pub var : * mut variant_t , pub n_var : :: std :: os :: raw :: c_int , pub var_type : :: std :: os :: raw :: c_int , pub shared_dirty : :: std :: os :: raw :: c_int , pub indiv_dirty : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_bcf_dec_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf_dec_t > ( ) , 104usize , concat ! ( "Size of: " , stringify ! ( bcf_dec_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf_dec_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf_dec_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_fmt as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_fmt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_info as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_info ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_id as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_als as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_als ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_allele as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_allele ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . m_flt as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( m_flt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . n_flt as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( n_flt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . flt as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( flt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . id as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( id ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . als as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( als ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . allele as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( allele ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . info as * const _ as usize } , 64usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( info ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . fmt as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( fmt ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . var as * const _ as usize } , 80usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( var ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . n_var as * const _ as usize } , 88usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( n_var ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . var_type as * const _ as usize } , 92usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( var_type ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . shared_dirty as * const _ as usize } , 96usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( shared_dirty ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf_dec_t > ( ) ) ) . indiv_dirty as * const _ as usize } , 100usize , concat ! ( "Offset of field: " , stringify ! ( bcf_dec_t ) , "::" , stringify ! ( indiv_dirty ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bcf1_t { pub rid : i32 , pub pos : i32 , pub rlen : i32 , pub qual : f32 , pub _bitfield_1 : __BindgenBitfieldUnit < [ u8 ; 8usize ] , u32 > , pub shared : kstring_t , pub indiv : kstring_t , pub d : bcf_dec_t , pub max_unpack : :: std :: os :: raw :: c_int , pub unpacked : :: std :: os :: raw :: c_int , pub unpack_size : [ :: std :: os :: raw :: c_int ; 3usize ] , pub errcode : :: std :: os :: raw :: c_int , } # [ test ] fn bindgen_test_layout_bcf1_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bcf1_t > ( ) , 200usize , concat ! ( "Size of: " , stringify ! ( bcf1_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bcf1_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bcf1_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . rid as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( rid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . pos as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . rlen as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( rlen ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . qual as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( qual ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . shared as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( shared ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . indiv as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( indiv ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . d as * const _ as usize } , 72usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( d ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . max_unpack as * const _ as usize } , 176usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( max_unpack ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . unpacked as * const _ as usize } , 180usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( unpacked ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . unpack_size as * const _ as usize } , 184usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( unpack_size ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bcf1_t > ( ) ) ) . errcode as * const _ as usize } , 196usize , concat ! ( "Offset of field: " , stringify ! ( bcf1_t ) , "::" , stringify ! ( errcode ) ) ) ; } impl bcf1_t { # [ inline ] pub fn n_info ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 0usize , 16u8 ) as u32 ) } } # [ inline ] pub fn set_n_info ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 0usize , 16u8 , val as u64 ) } } # [ inline ] pub fn n_allele ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 16usize , 16u8 ) as u32 ) } } # [ inline ] pub fn set_n_allele ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 16usize , 16u8 , val as u64 ) } } # [ inline ] pub fn n_fmt ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 32usize , 8u8 ) as u32 ) } } # [ inline ] pub fn set_n_fmt ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 32usize , 8u8 , val as u64 ) } } # [ inline ] pub fn n_sample ( & self ) -> u32 { unsafe { :: std :: mem :: transmute ( self . _bitfield_1 . get ( 40usize , 24u8 ) as u32 ) } } # [ inline ] pub fn set_n_sample ( & mut self , val : u32 ) { unsafe { let val : u32 = :: std :: mem :: transmute ( val ) ; self . _bitfield_1 . set ( 40usize , 24u8 , val as u64 ) } } # [ inline ] pub fn new_bitfield_1 ( n_info : u32 , n_allele : u32 , n_fmt : u32 , n_sample : u32 ) -> __BindgenBitfieldUnit < [ u8 ; 8usize ] , u32 > { let mut __bindgen_bitfield_unit : __BindgenBitfieldUnit < [ u8 ; 8usize ] , u32 > = Default :: default ( ) ; __bindgen_bitfield_unit . set ( 0usize , 16u8 , { let n_info : u32 = unsafe { :: std :: mem :: transmute ( n_info ) } ; n_info as u64 } ) ; __bindgen_bitfield_unit . set ( 16usize , 16u8 , { let n_allele : u32 = unsafe { :: std :: mem :: transmute ( n_allele ) } ; n_allele as u64 } ) ; __bindgen_bitfield_unit . set ( 32usize , 8u8 , { let n_fmt : u32 = unsafe { :: std :: mem :: transmute ( n_fmt ) } ; n_fmt as u64 } ) ; __bindgen_bitfield_unit . set ( 40usize , 24u8 , { let n_sample : u32 = unsafe { :: std :: mem :: transmute ( n_sample ) } ; n_sample as u64 } ) ; __bindgen_bitfield_unit } } extern "C" { pub fn bcf_hdr_init ( mode : * const :: std :: os :: raw :: c_char ) -> * mut bcf_hdr_t ; } extern "C" { pub fn bcf_hdr_destroy ( h : * mut bcf_hdr_t ) ; } extern "C" { pub fn bcf_init ( ) -> * mut bcf1_t ; } extern "C" { pub fn bcf_destroy ( v : * mut bcf1_t ) ; } extern "C" { pub fn bcf_empty ( v : * mut bcf1_t ) ; } extern "C" { pub fn bcf_clear ( v : * mut bcf1_t ) ; } pub type vcfFile = htsFile ; extern "C" { pub fn bcf_hdr_read ( fp : * mut htsFile ) -> * mut bcf_hdr_t ; } extern "C" { pub fn bcf_hdr_set_samples ( hdr : * mut bcf_hdr_t , samples : * const :: std :: os :: raw :: c_char , is_file : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_subset_format ( hdr : * const bcf_hdr_t , rec : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_write ( fp : * mut htsFile , h : * mut bcf_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vcf_parse ( s : * mut kstring_t , h : * const bcf_hdr_t , v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vcf_format ( h : * const bcf_hdr_t , v : * const bcf1_t , s : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_read ( fp : * mut htsFile , h : * const bcf_hdr_t , v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_unpack ( b : * mut bcf1_t , which : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_dup ( src : * mut bcf1_t ) -> * mut bcf1_t ; } extern "C" { pub fn bcf_copy ( dst : * mut bcf1_t , src : * mut bcf1_t ) -> * mut bcf1_t ; } extern "C" { pub fn bcf_write ( fp : * mut htsFile , h : * mut bcf_hdr_t , v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vcf_hdr_read ( fp : * mut htsFile ) -> * mut bcf_hdr_t ; } extern "C" { pub fn vcf_hdr_write ( fp : * mut htsFile , h : * const bcf_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vcf_read ( fp : * mut htsFile , h : * const bcf_hdr_t , v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn vcf_write ( fp : * mut htsFile , h : * const bcf_hdr_t , v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_readrec ( fp : * mut BGZF , null : * mut :: std :: os :: raw :: c_void , v : * mut :: std :: os :: raw :: c_void , tid : * mut :: std :: os :: raw :: c_int , beg : * mut :: std :: os :: raw :: c_int , end : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_dup ( hdr : * const bcf_hdr_t ) -> * mut bcf_hdr_t ; } extern "C" { pub fn bcf_hdr_combine ( dst : * mut bcf_hdr_t , src : * const bcf_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_merge ( dst : * mut bcf_hdr_t , src : * const bcf_hdr_t ) -> * mut bcf_hdr_t ; } extern "C" { pub fn bcf_hdr_add_sample ( hdr : * mut bcf_hdr_t , sample : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_set ( hdr : * mut bcf_hdr_t , fname : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_format ( hdr : * const bcf_hdr_t , is_bcf : :: std :: os :: raw :: c_int , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_fmt_text ( hdr : * const bcf_hdr_t , is_bcf : :: std :: os :: raw :: c_int , len : * mut :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcf_hdr_append ( h : * mut bcf_hdr_t , line : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_printf ( h : * mut bcf_hdr_t , format : * const :: std :: os :: raw :: c_char , ... ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_get_version ( hdr : * const bcf_hdr_t ) -> * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcf_hdr_set_version ( hdr : * mut bcf_hdr_t , version : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn bcf_hdr_remove ( h : * mut bcf_hdr_t , type_ : :: std :: os :: raw :: c_int , key : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn bcf_hdr_subset ( h0 : * const bcf_hdr_t , n : :: std :: os :: raw :: c_int , samples : * const * mut :: std :: os :: raw :: c_char , imap : * mut :: std :: os :: raw :: c_int ) -> * mut bcf_hdr_t ; } extern "C" { pub fn bcf_hdr_seqnames ( h : * const bcf_hdr_t , nseqs : * mut :: std :: os :: raw :: c_int ) -> * mut * const :: std :: os :: raw :: c_char ; } extern "C" { pub fn bcf_hdr_parse ( hdr : * mut bcf_hdr_t , htxt : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_sync ( h : * mut bcf_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_parse_line ( h : * const bcf_hdr_t , line : * const :: std :: os :: raw :: c_char , len : * mut :: std :: os :: raw :: c_int ) -> * mut bcf_hrec_t ; } extern "C" { pub fn bcf_hrec_format ( hrec : * const bcf_hrec_t , str : * mut kstring_t ) ; } extern "C" { pub fn bcf_hdr_add_hrec ( hdr : * mut bcf_hdr_t , hrec : * mut bcf_hrec_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_get_hrec ( hdr : * const bcf_hdr_t , type_ : :: std :: os :: raw :: c_int , key : * const :: std :: os :: raw :: c_char , value : * const :: std :: os :: raw :: c_char , str_class : * const :: std :: os :: raw :: c_char ) -> * mut bcf_hrec_t ; } extern "C" { pub fn bcf_hrec_dup ( hrec : * mut bcf_hrec_t ) -> * mut bcf_hrec_t ; } extern "C" { pub fn bcf_hrec_add_key ( hrec : * mut bcf_hrec_t , str : * const :: std :: os :: raw :: c_char , len : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn bcf_hrec_set_val ( hrec : * mut bcf_hrec_t , i : :: std :: os :: raw :: c_int , str : * const :: std :: os :: raw :: c_char , len : :: std :: os :: raw :: c_int , is_quoted : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn bcf_hrec_find_key ( hrec : * mut bcf_hrec_t , key : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn hrec_add_idx ( hrec : * mut bcf_hrec_t , idx : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn bcf_hrec_destroy ( hrec : * mut bcf_hrec_t ) ; } extern "C" { pub fn bcf_subset ( h : * const bcf_hdr_t , v : * mut bcf1_t , n : :: std :: os :: raw :: c_int , imap : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_translate ( dst_hdr : * const bcf_hdr_t , src_hdr : * mut bcf_hdr_t , src_line : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_get_variant_types ( rec : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_get_variant_type ( rec : * mut bcf1_t , ith_allele : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_is_snp ( v : * mut bcf1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_filter ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , flt_ids : * mut :: std :: os :: raw :: c_int , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_add_filter ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , flt_id : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_remove_filter ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , flt_id : :: std :: os :: raw :: c_int , pass : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_has_filter ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , filter : * mut :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_alleles ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , alleles : * mut * const :: std :: os :: raw :: c_char , nals : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_alleles_str ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , alleles_string : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_id ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , id : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_add_id ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , id : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_info ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , key : * const :: std :: os :: raw :: c_char , values : * const :: std :: os :: raw :: c_void , n : :: std :: os :: raw :: c_int , type_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_format_string ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , key : * const :: std :: os :: raw :: c_char , values : * mut * const :: std :: os :: raw :: c_char , n : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_update_format ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , key : * const :: std :: os :: raw :: c_char , values : * const :: std :: os :: raw :: c_void , n : :: std :: os :: raw :: c_int , type_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_get_fmt ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , key : * const :: std :: os :: raw :: c_char ) -> * mut bcf_fmt_t ; } extern "C" { pub fn bcf_get_info ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , key : * const :: std :: os :: raw :: c_char ) -> * mut bcf_info_t ; } extern "C" { pub fn bcf_get_fmt_id ( line : * mut bcf1_t , id : :: std :: os :: raw :: c_int ) -> * mut bcf_fmt_t ; } extern "C" { pub fn bcf_get_info_id ( line : * mut bcf1_t , id : :: std :: os :: raw :: c_int ) -> * mut bcf_info_t ; } extern "C" { pub fn bcf_get_info_values ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , tag : * const :: std :: os :: raw :: c_char , dst : * mut * mut :: std :: os :: raw :: c_void , ndst : * mut :: std :: os :: raw :: c_int , type_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_get_format_string ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , tag : * const :: std :: os :: raw :: c_char , dst : * mut * mut * mut :: std :: os :: raw :: c_char , ndst : * mut :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_get_format_values ( hdr : * const bcf_hdr_t , line : * mut bcf1_t , tag : * const :: std :: os :: raw :: c_char , dst : * mut * mut :: std :: os :: raw :: c_void , ndst : * mut :: std :: os :: raw :: c_int , type_ : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_hdr_id2int ( hdr : * const bcf_hdr_t , type_ : :: std :: os :: raw :: c_int , id : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_fmt_array ( s : * mut kstring_t , n : :: std :: os :: raw :: c_int , type_ : :: std :: os :: raw :: c_int , data : * mut :: std :: os :: raw :: c_void ) ; } extern "C" { pub fn bcf_fmt_sized_array ( s : * mut kstring_t , ptr : * mut u8 ) -> * mut u8 ; } extern "C" { pub fn bcf_enc_vchar ( s : * mut kstring_t , l : :: std :: os :: raw :: c_int , a : * const :: std :: os :: raw :: c_char ) ; } extern "C" { pub fn bcf_enc_vint ( s : * mut kstring_t , n : :: std :: os :: raw :: c_int , a : * mut i32 , wsize : :: std :: os :: raw :: c_int ) ; } extern "C" { pub fn bcf_enc_vfloat ( s : * mut kstring_t , n : :: std :: os :: raw :: c_int , a : * mut f32 ) ; } extern "C" { pub fn bcf_index_load2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn bcf_index_build ( fn_ : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_index_build2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bcf_index_build3 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int , n_threads : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { # [ link_name = "\u{1}bcf_float_vector_end" ] pub static mut bcf_float_vector_end : u32 ; } extern "C" { # [ link_name = "\u{1}bcf_float_missing" ] pub static mut bcf_float_missing : u32 ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bam_hdr_t { pub n_targets : i32 , pub ignore_sam_err : i32 , pub l_text : u32 , pub target_len : * mut u32 , pub cigar_tab : * mut i8 , pub target_name : * mut * mut :: std :: os :: raw :: c_char , pub text : * mut :: std :: os :: raw :: c_char , pub sdict : * mut :: std :: os :: raw :: c_void , } # [ test ] fn bindgen_test_layout_bam_hdr_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bam_hdr_t > ( ) , 56usize , concat ! ( "Size of: " , stringify ! ( bam_hdr_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bam_hdr_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bam_hdr_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . n_targets as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( n_targets ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . ignore_sam_err as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( ignore_sam_err ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . l_text as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( l_text ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . target_len as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( target_len ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . cigar_tab as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( cigar_tab ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . target_name as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( target_name ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . text as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( text ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam_hdr_t > ( ) ) ) . sdict as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( bam_hdr_t ) , "::" , stringify ! ( sdict ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bam1_core_t { pub tid : i32 , pub pos : i32 , pub bin : u16 , pub qual : u8 , pub l_qname : u8 , pub flag : u16 , pub unused1 : u8 , pub l_extranul : u8 , pub n_cigar : u32 , pub l_qseq : i32 , pub mtid : i32 , pub mpos : i32 , pub isize : i32 , } # [ test ] fn bindgen_test_layout_bam1_core_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bam1_core_t > ( ) , 36usize , concat ! ( "Size of: " , stringify ! ( bam1_core_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bam1_core_t > ( ) , 4usize , concat ! ( "Alignment of " , stringify ! ( bam1_core_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . tid as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( tid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . pos as * const _ as usize } , 4usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( pos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . bin as * const _ as usize } , 8usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( bin ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . qual as * const _ as usize } , 10usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( qual ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . l_qname as * const _ as usize } , 11usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( l_qname ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . flag as * const _ as usize } , 12usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( flag ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . unused1 as * const _ as usize } , 14usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( unused1 ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . l_extranul as * const _ as usize } , 15usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( l_extranul ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . n_cigar as * const _ as usize } , 16usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( n_cigar ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . l_qseq as * const _ as usize } , 20usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( l_qseq ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . mtid as * const _ as usize } , 24usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( mtid ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . mpos as * const _ as usize } , 28usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( mpos ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_core_t > ( ) ) ) . isize as * const _ as usize } , 32usize , concat ! ( "Offset of field: " , stringify ! ( bam1_core_t ) , "::" , stringify ! ( isize ) ) ) ; } # [ repr ( C ) ] # [ derive ( Debug , Copy , Clone ) ] pub struct bam1_t { pub core : bam1_core_t , pub l_data : :: std :: os :: raw :: c_int , pub m_data : u32 , pub data : * mut u8 , pub id : u64 , } # [ test ] fn bindgen_test_layout_bam1_t ( ) { assert_eq ! ( :: std :: mem :: size_of :: < bam1_t > ( ) , 64usize , concat ! ( "Size of: " , stringify ! ( bam1_t ) ) ) ; assert_eq ! ( :: std :: mem :: align_of :: < bam1_t > ( ) , 8usize , concat ! ( "Alignment of " , stringify ! ( bam1_t ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_t > ( ) ) ) . core as * const _ as usize } , 0usize , concat ! ( "Offset of field: " , stringify ! ( bam1_t ) , "::" , stringify ! ( core ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_t > ( ) ) ) . l_data as * const _ as usize } , 36usize , concat ! ( "Offset of field: " , stringify ! ( bam1_t ) , "::" , stringify ! ( l_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_t > ( ) ) ) . m_data as * const _ as usize } , 40usize , concat ! ( "Offset of field: " , stringify ! ( bam1_t ) , "::" , stringify ! ( m_data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_t > ( ) ) ) . data as * const _ as usize } , 48usize , concat ! ( "Offset of field: " , stringify ! ( bam1_t ) , "::" , stringify ! ( data ) ) ) ; assert_eq ! ( unsafe { & ( * ( :: std :: ptr :: null :: < bam1_t > ( ) ) ) . id as * const _ as usize } , 56usize , concat ! ( "Offset of field: " , stringify ! ( bam1_t ) , "::" , stringify ! ( id ) ) ) ; } extern "C" { pub fn bam_hdr_init ( ) -> * mut bam_hdr_t ; } extern "C" { pub fn bam_hdr_read ( fp : * mut BGZF ) -> * mut bam_hdr_t ; } extern "C" { pub fn bam_hdr_write ( fp : * mut BGZF , h : * const bam_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_hdr_destroy ( h : * mut bam_hdr_t ) ; } extern "C" { pub fn bam_name2id ( h : * mut bam_hdr_t , ref_ : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_hdr_dup ( h0 : * const bam_hdr_t ) -> * mut bam_hdr_t ; } extern "C" { pub fn bam_init1 ( ) -> * mut bam1_t ; } extern "C" { pub fn bam_destroy1 ( b : * mut bam1_t ) ; } extern "C" { pub fn bam_read1 ( fp : * mut BGZF , b : * mut bam1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_write1 ( fp : * mut BGZF , b : * const bam1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_copy1 ( bdst : * mut bam1_t , bsrc : * const bam1_t ) -> * mut bam1_t ; } extern "C" { pub fn bam_dup1 ( bsrc : * const bam1_t ) -> * mut bam1_t ; } extern "C" { pub fn bam_cigar2qlen ( n_cigar : :: std :: os :: raw :: c_int , cigar : * const u32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_cigar2rlen ( n_cigar : :: std :: os :: raw :: c_int , cigar : * const u32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_endpos ( b : * const bam1_t ) -> i32 ; } extern "C" { pub fn bam_str2flag ( str : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_flag2str ( flag : :: std :: os :: raw :: c_int ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn sam_index_load ( fp : * mut htsFile , fn_ : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn sam_index_load2 ( fp : * mut htsFile , fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char ) -> * mut hts_idx_t ; } extern "C" { pub fn sam_index_build ( fn_ : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_index_build2 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_index_build3 ( fn_ : * const :: std :: os :: raw :: c_char , fnidx : * const :: std :: os :: raw :: c_char , min_shift : :: std :: os :: raw :: c_int , nthreads : :: std :: os :: raw :: c_int ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_itr_queryi ( idx : * const hts_idx_t , tid : :: std :: os :: raw :: c_int , beg : :: std :: os :: raw :: c_int , end : :: std :: os :: raw :: c_int ) -> * mut hts_itr_t ; } extern "C" { pub fn sam_itr_querys ( idx : * const hts_idx_t , hdr : * mut bam_hdr_t , region : * const :: std :: os :: raw :: c_char ) -> * mut hts_itr_t ; } extern "C" { pub fn sam_itr_regions ( idx : * const hts_idx_t , hdr : * mut bam_hdr_t , reglist : * mut hts_reglist_t , regcount : :: std :: os :: raw :: c_uint ) -> * mut hts_itr_multi_t ; } extern "C" { pub fn sam_open_mode ( mode : * mut :: std :: os :: raw :: c_char , fn_ : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_open_mode_opts ( fn_ : * const :: std :: os :: raw :: c_char , mode : * const :: std :: os :: raw :: c_char , format : * const :: std :: os :: raw :: c_char ) -> * mut :: std :: os :: raw :: c_char ; } pub type samFile = htsFile ; extern "C" { pub fn sam_hdr_parse ( l_text : :: std :: os :: raw :: c_int , text : * const :: std :: os :: raw :: c_char ) -> * mut bam_hdr_t ; } extern "C" { pub fn sam_hdr_read ( fp : * mut samFile ) -> * mut bam_hdr_t ; } extern "C" { pub fn sam_hdr_write ( fp : * mut samFile , h : * const bam_hdr_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_hdr_change_HD ( h : * mut bam_hdr_t , key : * const :: std :: os :: raw :: c_char , val : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_parse1 ( s : * mut kstring_t , h : * mut bam_hdr_t , b : * mut bam1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_format1 ( h : * const bam_hdr_t , b : * const bam1_t , str : * mut kstring_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_read1 ( fp : * mut samFile , h : * mut bam_hdr_t , b : * mut bam1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn sam_write1 ( fp : * mut samFile , h : * const bam_hdr_t , b : * const bam1_t ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_get ( b : * const bam1_t , tag : * const :: std :: os :: raw :: c_char ) -> * mut u8 ; } extern "C" { pub fn bam_aux2i ( s : * const u8 ) -> i64 ; } extern "C" { pub fn bam_aux2f ( s : * const u8 ) -> f64 ; } extern "C" { pub fn bam_aux2A ( s : * const u8 ) -> :: std :: os :: raw :: c_char ; } extern "C" { pub fn bam_aux2Z ( s : * const u8 ) -> * mut :: std :: os :: raw :: c_char ; } extern "C" { pub fn bam_auxB_len ( s : * const u8 ) -> u32 ; } extern "C" { pub fn bam_auxB2i ( s : * const u8 , idx : u32 ) -> i64 ; } extern "C" { pub fn bam_auxB2f ( s : * const u8 , idx : u32 ) -> f64 ; } extern "C" { pub fn bam_aux_append ( b : * mut bam1_t , tag : * const :: std :: os :: raw :: c_char , type_ : :: std :: os :: raw :: c_char , len : :: std :: os :: raw :: c_int , data : * const u8 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_del ( b : * mut bam1_t , s : * mut u8 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_update_str ( b : * mut bam1_t , tag : * const :: std :: os :: raw :: c_char , len : :: std :: os :: raw :: c_int , data : * const :: std :: os :: raw :: c_char ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_update_int ( b : * mut bam1_t , tag : * const :: std :: os :: raw :: c_char , val : i64 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_update_float ( b : * mut bam1_t , tag : * const :: std :: os :: raw :: c_char , val : f32 ) -> :: std :: os :: raw :: c_int ; } extern "C" { pub fn bam_aux_update_array ( b : * mut bam1_t , tag : * const :: std :: os :: raw :: c_char , type_ : u8 , items : u32 , data : * mut :: std :: os :: raw :: c_void ) -> :: std :: os :: raw :: c_int ; } # [ repr ( C ) ] # [ derive ( Copy , Clone ) ] #[derive(Debug)] [INFO] [stdout] | ++++++++++++++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error: aborting due to 6 previous errors [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0277`. [INFO] [stdout] [INFO] [stderr] error: could not compile `rust-htslib` (lib) due to 7 previous errors [INFO] running `Command { std: "docker" "inspect" "48191300336e74fd9a8ab88cab94a1a2c1a81e4f95f4e151baee03e92b45d6c2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "48191300336e74fd9a8ab88cab94a1a2c1a81e4f95f4e151baee03e92b45d6c2", kill_on_drop: false }` [INFO] [stdout] 48191300336e74fd9a8ab88cab94a1a2c1a81e4f95f4e151baee03e92b45d6c2